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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000049:1291713..1298295+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00062115 ID=BlTCONS00062115|Name=BlTCONS00062115|organism=Branchiostoma lanceolatum|type=mRNA|length=6583bp|location=Sequence derived from alignment at Sc0000049:1291713..1298295+ (Branchiostoma lanceolatum)
ACGAGAGATATCTGACAGAAGAACTGGTGGAAGGAGAAAATGAAAGTTTG
TTGTAAAAACAACGACACAAGTTCCGGATATTTTTCCTTGGTGAGGTCAG
ATATCGTCTCGTACCCAGGACACGCCTCTCGTTCCCAATTTCAGAACACA
CCAAGTGGAGTTTAAAATAGGGGTGTGTTGTTTACAATTAGCATTATCAT
AATATCACATATCATACCAATATTGACGTATAACGTACGCTATTACTCTT
GTTAACAAAAATTATTAAATGTTTTTGGGTAGAAATTAAAGCTGTGCTTC
CACAAACACCGAGAAGAGACCAACACCGTGACGTCATTTGCTTGTACAGA
CAGTCAGCCATCATCGTCACATGATTCCTCTTAGCTCGTAGCAGTCATGG
CTCTGAACATGACTGTGGTCAACCTGAAGGTGGGTTTAACGCTGCATTCT
ACTGTTTACAATGTTGTACTAGTGGGCCCCTAGTCCCTGCTCTGCCTGAA
GCTTCAGTAGTCTAACGTTAGGCGTTATCTTGACATGTTTACACTTTTAC
AGGGTGCTGATGTGCTGTTGATCGATCTGTCTGTGGGGTGGGGGGAGCGA
GTTATTTACATGTGCTGGTAAATCCAAGCAGATGTGTTGCTTTTCGTAGC
TTTGTACATTTTTTTACAGGCAATGTTACATGTTTCGTATTGGTCACCCT
TTTGTGGTAGGCGTAATTTGTAAGAAGACCATTTATGATGCTTGAAGAAT
GCACAAGAAAACATGGAAAAAGTGGGGTGTGGTTGGGATATTATAAACTA
GTGTGATTCTAGATTTGTGATGGGGAAAGCAAGAACATTCTCTGGAAGTC
AGAGATGGCAGACTTTACCCCCTTACGCATACTGATTTGTGACTCTTTGG
TCTGCCAGTAGCTATAGAGAGTGTAGTGTAGTTTACATTACATATCATGT
TACATCCTGGATACTACTTGTGGTCAACTGCCCCTCATGATCTGCCTGAT
GATGATGATGACATTGACGATGATCTCAAAATCCGTTTTTCGGCAGACCT
GCATCTGACAACTTTTACCAGGAGCAATTATAATCTTGCCTTTCAGTCCG
TCAAAAATCTTAGCCATGTCATTTTTTAACAATTTTGTTGTCAACTATTT
TGTAAGTGAACTAGTTACTAGTAACAAGTAAATTAATGAATTTGACTCTT
GGTAGATGTGTATGTTCATTTGATATTGAAATGGGAGCCGACGTACTTAA
ACAAGTACATGCACTTAAACATTGCCCTTTTGGAAATATCAAGCATTTAC
ATTACATGCATGTGCTTCACATTGTGTGTTGTATATTTATCAATATGTTG
TTCTTATTTGCAGGCTATTGTCTTAGGACATTGGGTGCTCACAGTCTGGT
AAGTACCCTTTAAGTAAGACACAAGCAAAGAAATTAGCAAACCATTCTCA
AAAGTTGCTGTAAATTTTTAATTTTCAGCGTGCTACAAAAGTTATGTGCC
TCAAAGTCAAACCAAAATAGCCTTACAGTATTTCTTTTGGTTTGTTTGCA
GGGCATGTATGGGAGGTGCGATACAGTGGCTCCCATCCTCCTACCAGTGG
TGCAACTTTACAGTGTTAGCTGTGGGAGTCTGGGCAGTGGCACAGAAGGA
CTCAGTAGACGCTATCTTCATGGTAGGTCACGACCTGTTTGAATGGTCGA
TTCTTCCACAGGCCTAGATGTGGTTTTACAATAGTCCATCGATACATTGT
AATAGGATGGGGAGTGAAATATCTTGCATTTGCTTTCAAATGTTGGCTTT
CTTGTTGAATTTGATGGATGATATTATTCTAATTGTGCCTCTGTTTTTAG
TTCCTTGCAGGCATGACAATTAGTATCCTTCTAGACATCATCCACTTTGG
GATCTACTATGGCAGATCCATCCAGAACCAGAATGGTAAGTAGCATACCT
TGGTGTCATCATCATCATCGGTCGGTCGTGCAGCGGCCGATCACACGTCC
TCTCCACATCCGCCGATCAGTAGCCATTGCAGTGATGGCCTTGGTGTAAA
CAAGGAATGAACAAAGGCTTATAGTGCACGTGATTGCGGTACTATGGAAC
CTTTTATTTGAATGCAACCAAAATATTGATCATGAAATAAAACTAACAGT
ATAAAGGGGTAGAAAAACGACAAGACTGCTGTAATGTAAAAAAAAAAATA
TATAAACACATTGACTAGTCCTTGCTTCTTGATTTGTCATGTGATACTTT
GTGATCCATCCTCTTACATTTTGGGTAGACCTAAATCTATGTGATTTTGT
GTTTTTCCACTACAGCTCAGCCTTCAGTCCGAGATGAGTTCAGATTTGCT
GTTGGGTATCCTTGTTAAATACATGTACATGTACTACTATAGTGATTTAC
TATGACACATTTTCATGTATATTATGCATACTGCACCTATATTTGATGTT
TCCCAGTTGTCAGTGTTATGTTAACATTTTGTCTTCCTTTGATCTTTCCC
GTACCTTTTGGCTGAGCAGTCTCAAAATTAAGTATCTGATAACACACATT
GTGAAAAATTAACAATTCATTATACATTGTGTTGTTAGTAACTGCCTAGT
ATTATGGTATAACATTGTACATGTACTGTCATTTCTGTTGTTACAAACAA
TCCTAGACTTTCATTTCATTTGACATTACAAACCTCTATGATAGTATAAT
GGGACATCAAGTCTAAACCTGTCAGTTGTATTATTATAATAGCTGATTGG
AAAGGGATCATTTTGTGCAATACATCCTTAACCCTAAGCTTGTAGCATGG
GCATTCTGAACCTGATCCTGAAACCTTTCACCTGTCTATTGCTGTACCAG
ATGTACCGGGAGAGAGGAGGGGAGATGTACATGAACTTTGGTAAGTATGC
TTGGTCAACAAAACACTCAACAGTAGATTGTAACATGAACCCAAGGGGAT
ATACTTGTAGCTCAACTGGTAGCTAACTTATGTTTCCAATTAATCGGTAG
CTAGGAGACTGACTGGTTCAAGTCCCAGAGTCAGGATATCTCGGTAGCGG
CTGCACCGTCTTTCGGAAAGGATGTATAGTGGGGGTCCTGTGTTCAAGTT
GGTGCCTCGAGCACATTAAAGGGGGAAGGGCTAGCAACCACTCCCTGTAA
AAATAAACCCTGTTACTGAAACGGCAAGGAATGTTGCTGCCTATGTGCAT
CTAGGCACTGCAAGAGTCTGAACGAACAAACAAACATGAACTCAAGGTTC
CAGAAAATCTACTTTCCTGTCTTCAATTTCCTGCTATATGCACCTCTGTT
GCCTTATGAGAGCCAGTGAAAAAGTTCAAAATAATGAATGAAACAAGAAA
TTCACAAACAATAGAAATGTTTCATAGAGGTATGAGATCTTCAATTTCTT
GTTGCACAATGGAATTGTTTTTGTTGTAGATGCTGCACAGGAAAGGTATG
GCCCTCTGGACAGCTCTACAGAAATCCCACCGCCACCACAGCCTGTCCCC
CCACCACCCCAGCAGAAAGGGCCTTCCTACATGTACCAGGACGTGCCATG
ATAGGTCAACACAACCTCTACATGTAGGTTTACACTTCAACCTGCACAAA
TGTCTACAGGTTAATACATTAGGTTGTCCTAGATTGATTTACTGTGCTGG
TTGAAATGTAAACTTATGATTCAAATTGGTAAAGCACACCTGTAATAAGG
CCAAGGAAAATTGACACTATGTTTCTGATTATGGTTCTGAAAAGATTGTT
AACAGAGTGTGATATAGGAAGTCGATTAGAAAAATTGCAAGACTCCTTGG
AATTCTCTTCTGAATTTCATTATTTCAGATGTCAGATCAAAAACTTAATG
TCTCTTGGCAGCAGTCTACACACACACAAAAAAAAAAACCTAGTGTCAGC
AGGTTTTTGCTAGGGTTGGTCCAGAAACACAATTTTTTCCCTAAGCCTAG
CCTGATGGCTGCATTGTAGTTTCCTATAGTTTTGTGTGCAGGGATCTCTT
CTTCATCTGTTCTTCTGTTGCTGGATGGAATTTTACTGCTCTGGACATAT
TTCAGCCATTATCCGTCCACATTGACAAGCAAAATTAAAAACTCAATGAC
ATCTTCATCAAAAGGTCAACACTTTGACAAACTTAAAAACCAGTCATTTT
TAATTGATCCCCTTAAAGTGAAGAAAGTAGCATTTTCAAAACTTCATGAC
ATTGTCATCACATCGTTTACAGTGCGGCAACACTTTTGCAAACTTGAAAA
AATGAAGCCACTTGAAATTCGCCCCCTTAGAATGCAGCAAATAGTATTTC
AGAGGGTTAAAGTTTCCAAATCCTCCAAGAGATCAGGCCCTGGGTTCCTA
TTATCTGTCAAGCTAAGAGGATGGAGAGAAAGTATAGCTGGAGTCAGTCT
TGTCTGTGTGTAACAGCACCTTTGACTACTTTCCAGGCTATTTGTTTGTT
TGAATGTCTGTGTATTTGTTCATGAGAAACTCAAATTGGCCTGTAGGCCA
CTTTTCATTGAGGTAATGTGGTAGGAGGTAAAGCGGGTATCTCACTGGAG
TGCGGCAAATTATTGTGGCAACTTTGCAAATTTTCCCTTGCGCTCACACT
GATGTGCGACACACAGGTAAAATATGTGACCTCTACAGGCACAATGGCCA
GAATGTTACATTCTTAATTACGGCTCTGATGCCATTGACTTAAAAACCAA
TTTACAGTTATTAGAATTCCTTGTGTCAAAAAGAGATTTGCAATGATCGC
ACCACTTTGCGGCCATATGCACCATTTTGCCACCATTTTGATTTTCAAAA
AATTTCATTTTCAGGCAACACGTTGGTGCTGGTTTGTGCCACATTGCAAA
TTCCTTTCACAATTTGATGCCATTAGGCATAACCTAGTGAGATACCCGCT
TAAGGATCAGACTAGATATAACCCGCTTAAGGATCAGACTAGATATAACA
GTGCTTGTATATTAACCTTGTATTTTCTTTTCATGTATCTTTATTGTAAG
GCTGTTTCTGAAAATGTGGGTCTTGTATGTTTATTGGCTGAAAAGTAATT
AGATGTATATCTTATATGGTGAAGTGCTCATTGATGTTTATACAAGCAGG
GTAAGAAATTACATTTATATTAATTGTTACGTATTAGTAGGACATGTGAG
ATGTAGTAAGATAAACCTAGGGCTAGTTGTTCTTCTGTACAGATGCATTG
CATATCATTATTTAATTAGAACAGGGCTTGTGCAAAAATAGTTACCAGGA
GAAAAGCTTTGATGTAACGTTGCAGTAGATATCCTTATAGTCCATAACAC
TTCCTGTATTTTCTACATTTTAGCAATCAGTGTCGGTGTAACTGTAAATT
GATTTAAGGTTGAGAGGACTTAATTTTGTGGTATGAGGGGAAGGGAGATG
TTCCCTGTGTTGTAAGTTTGCGGTGAATATAGCTGTAGTACAAATGTAGC
ACATTGCAGGCAGAGCAAATGTTCACGGTGTGATAAATTTTCAGTAAGTG
CTCACCATGAAAACTGCAAACTTAAAACCACAGCAATTATTTCACTATTT
ACAGTTGGTGAATTACTTGATTCCATTTGGAGTATTTAAGATATAATCTT
TGAGGGAAGTTTAGAGAATAATGAATTTTTCACCTTGGTGAGGACAAGAG
ATACTCTTAAAAATTCAAGGGAACTGTTAGAAATAGCTAGCCAATCATGC
CATAAAGGAAAAAAATAAATTGCTAAGGATGGACAAATCTTAGGTGTTCT
GTCAATGTGTCGTGTCTTGAATGAGTAGCTTTTGGAGACCTATGCATAGA
AGGTATCATTTATAAGTAGGTTTGTTGCACCTTAGAGATCTGAGTCAGTT
GACAGTGCATGAAGTCGTTTACACATGTCAGGAATTCATCTTATATGTAC
AGAAATTTCCTCCCATCGCTATTGACTTTTCATGACTTTTATTCATTTTG
GAAGCATTCTTTTCGCATTGATTAGGTTGACTAGGTTTTGATGCACATAT
CCATGATGAATGAGACAAGTTTGGCAAAACTGATTAAGAAAAATCAAGCC
ATTTATTCATTTACATAGAATAACCGGTAAAACAGGGTATGTGTCACAAT
CTATAAAGAAACATTCGAAGTTTTGAATAAAGCTAATATTTTCTTACGAA
CCGGAAAATGTGATAACACAACTATTCCAATTCATTGGCTACTTCGCAAA
ATAGTCTCATATCGATATCCTGCAAGGTCTTTTTTTAATAATCATTCCGA
ACATTTCAATGTTGAATAATCATTCCAAATGCCTCTTGGTTTCAGGGTCC
TTTTTGAATATCAATTCCAAATACTTCTTGGTTTCAGGGTCCTTTTTAAT
TAATAATTCTGAATGCTTTTCAACCTATTGCAAACGCAATGAATGTGTCA
TTTGTCTGGCTTTATCCCAAATACATCTAGTATCCATAGTAAACGCATAT
AACGTAACTATTCATTAGCTACTTCGCAAAATTAATCTCAAATCCTTCAA
GGCCCTTTTTGAATAATCATTCTGAATACTTCTTGGTACTTTTCAACCAA
TAGTAACCACAATGAATGAGTCATTTGTCTGGC Coding sequence (CDS) from alignment at Sc0000049:1291713..1298295+ >BlTCONS00062115 ID=BlTCONS00062115|Name=BlTCONS00062115|organism=Branchiostoma lanceolatum|type=CDS|length=531bp|location=Sequence derived from alignment at Sc0000049:1291713..1298295+ (Branchiostoma lanceolatum)
ATGGCTCTGAACATGACTGTGGTCAACCTGAAGGCTATTGTCTTAGGACA
TTGGGTGCTCACAGTCTGGGCATGTATGGGAGGTGCGATACAGTGGCTCC
CATCCTCCTACCAGTGGTGCAACTTTACAGTGTTAGCTGTGGGAGTCTGG
GCAGTGGCACAGAAGGACTCAGTAGACGCTATCTTCATGTTCCTTGCAGG
CATGACAATTAGTATCCTTCTAGACATCATCCACTTTGGGATCTACTATG
GCAGATCCATCCAGAACCAGAATGCTCAGCCTTCAGTCCGAGATGAGTTC
AGATTTGCTGTTGGCATGGGCATTCTGAACCTGATCCTGAAACCTTTCAC
CTGTCTATTGCTGTACCAGATGTACCGGGAGAGAGGAGGGGAGATGTACA
TGAACTTTGATGCTGCACAGGAAAGGTATGGCCCTCTGGACAGCTCTACA
GAAATCCCACCGCCACCACAGCCTGTCCCCCCACCACCCCAGCAGAAAGG
GCCTTCCTACATGTACCAGGACGTGCCATGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00062115-exon-Sc0000049-1564993656:1291713..1291802 | BlTCONS00062115-exon-Sc0000049-1564993656:1291713..1291802 | Branchiostoma lanceolatum | exon |
| BlTCONS00062115-exon-Sc0000049-1564993656:1291995..1292141 | BlTCONS00062115-exon-Sc0000049-1564993656:1291995..1292141 | Branchiostoma lanceolatum | exon |
| BlTCONS00062115-exon-Sc0000049-1564993656:1293076..1293110 | BlTCONS00062115-exon-Sc0000049-1564993656:1293076..1293110 | Branchiostoma lanceolatum | exon |
| BlTCONS00062115-exon-Sc0000049-1564993656:1293264..1293384 | BlTCONS00062115-exon-Sc0000049-1564993656:1293264..1293384 | Branchiostoma lanceolatum | exon |
| BlTCONS00062115-exon-Sc0000049-1564993656:1293563..1293647 | BlTCONS00062115-exon-Sc0000049-1564993656:1293563..1293647 | Branchiostoma lanceolatum | exon |
| BlTCONS00062115-exon-Sc0000049-1564993656:1294028..1294067 | BlTCONS00062115-exon-Sc0000049-1564993656:1294028..1294067 | Branchiostoma lanceolatum | exon |
| BlTCONS00062115-exon-Sc0000049-1564993656:1294508..1294602 | BlTCONS00062115-exon-Sc0000049-1564993656:1294508..1294602 | Branchiostoma lanceolatum | exon |
| BlTCONS00062115-exon-Sc0000049-1564993656:1295142..1298295 | BlTCONS00062115-exon-Sc0000049-1564993656:1295142..1298295 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000049 | genome | Sc0000049:1291713..1298295 + |
Properties
| Property Name | Value |
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| GeneID | BlCUFF030612 |
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