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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000049:1216791..1220215+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00062112 ID=BlTCONS00062112|Name=BlTCONS00062112|organism=Branchiostoma lanceolatum|type=mRNA|length=3425bp|location=Sequence derived from alignment at Sc0000049:1216791..1220215+ (Branchiostoma lanceolatum)
ACTATTGTGGCTTGAATCTTACTCAAAATCAAGCTCAATGTGACGTGTAC
GAACTGCCATACAAGTACCAGAGTTAGTACATCATGTGCTCTAGTGGGTG
TGGCACTAAGAATGCCATTAACAAAGAAGCCTTGCTGGTTCACGCTCTAT
GCCTATGGCATGGATCATTGATCGAAGCACGCCGGCCATGACTCAGCCCA
ATGCAATTATGTGCCCATGTTAGCAGAGGAACACAGAAGCACGCTCGGAT
AAGGAACAGGGGAGCTTGAACTGACAGACCAGGACGCCTTTCCTGAGTCT
ATCACTTCTACATGTACGGGCCAGGTTTACATTGGTGCACTCGTACTAAG
GCCATATCTCGATCACCTGCATTAGTCCCCCCCCCCACACGTAGAAATAG
AAAAAGATTACTCAATTGTTTGTTCGTTCGTATTTCATTTGGCGATATCT
ATCGCCAATTGGCATGCAGTCAAAGCCAATTATTGGCATCATTATCATAA
CTGGGTGGGCCGACTACTCTCTCCTCGTAGCCAGGGGGAGCTTACAATTA
CCGTGGCTAAAAATCAACGGTCTGGAAGAGTTCACATTCGGCGCTATCTG
GGGAGACCTCAACATGACAGTAATTGCCCAAGGTGCGGCCATAGTACTGT
AGCACTAGGAGCACATCCTTATCCGAAGCTAGGTACTCATTTTCACCTGA
GTCGAGTGAGGAAATATGTGTACTTTTCCAAGGAGCACGGCACTGGGGTC
TGCCGGGGATTCGAAACCAGAACTATTAGATCTTAAGTCAACTACCCTAG
CCACAACACCACATTTACCTTGAAANACACCACATTTACCCTGAAAATTA
TATAAGGACAGTTCTGAAAACATTATTATGACATATCATGATCCGGCACA
TCACTTTATCCGATATCAATTCATAATCTTATCGTCATTATGTCTGTACC
GTAACCTCGTCTCCAGATCTGAAGGCCCTGATTGCAGCACGGATCCAGAA
GTTCACGGCCTGCTTCAAGGCTAACGACATGAAAGGTCTGTTTAGCATGT
ACATGGTGGACTGCAAGATCATGAAGACAGGAATGGACACTGCACACGGC
CACGAAGGTAAGGATATAGTCACATTATAGAGCATTGTTGGCTACTGCCC
TTTAAGAATTGTAATGGGAAAAATATTAGAATTACTGAGCCAGGAAACCC
CCTCTCTCTCAGGCTGTATCTCTTCCTGTCTCTGTCTGTCACGGTGTGTT
TATATGTGTGTTTATAATCCGAAATCGCGCATCATGGCGGATACCGACGT
TTCCGAGTAAATCCGGACAAATCCGTAGTCCTTGCTCAGATCCGAAGTTA
CACTGCAGATCCGGCAATTCCGGCACCTGACTCAGCCGAAAAGAATTACT
TAGACACATATCACTTCAGTATTGCATTTAGTGAGTTTTGAACTTGGAAA
TGTTGAATTGTGAAATGATGTTACCAGCAGATATGCTGGAATGGATTTCC
TCAACTTCCTGTCATTGAATAATGTTTTGGGTATCGTTAAGTTGTACGTG
TACCAGTATTTATGAATAACCAACCACTTTATCTAAGTTCGTGTGTTTGA
TCTGTACGTATTCGTGGCATATACAGATATATTCTGGATCGAAACGTGCC
AAAGATTGTGGAAAGTTCGTATGTTCGTGTGTGGAAAATCTGATCATCCC
ATAAACTCTTGGAGTATAATCAAATTACCAAACTGTATTGACTGCAGGAT
TAGGGAAGGTGGTGGCAGGTTTTCACGCTCTCGGTGTGACGACCGTGGAG
AGGAAGTCAGAGGAAGTCGGACCAATGGGCAGTGACGTCATGTACGAGCG
AGGCGTCTACACTATGAAGACCGAGGACGGCACCCTGGCTGACAACGGGA
AGTAAGTCATTTTGTTTATACTTGTTGTTCATTATTTTCGTATGTGTACA
TGTGTGCGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGCGTGTGAA
CAGCATAACTCGAGAAGTCGTCAATGAACCTTTAAATATTTGGTATGTTG
GTAGGGTTTGCAGGAGGAAATAATAAAATTGAGAAGACCAACATAGTGAT
ATGTTATTTATGCAAATTAGGACCGAATTTGCATAATTCATGAAGAACAT
TTATATTTCAATCGTGCCTAATATCAGGAACTATCATACTCAGTACGTAC
GTAACTTTCTTTGAGAGGAATATAAATAATGCAAATTATGACCTTACTTG
CATAATCAATTAGAAAACTGTTTCATACGTTTGTGGTAAATGATAACATA
TACGTATAAGTGACACATGAAGGTTAGATAAAGGTGAAAGGTAAAAAATT
CCTGGATTGAAAGAAAAATATTTAAATGACATAGTACTTTGCTGTAAAAA
ACGTGCCGTTTCTCCAGGCTGAAATACTCTAAATACATTTATATATGTTA
TATTATGTTAATGATATTAAGTTGAAATATTTTTTCTTGATATTTTAAAG
GTACATTGTGATTTGGAAGAAAATTGGCAGTGACTGGTTCCAGTACATCG
ACATCTTCAACACAAACAACGCCTGAAGATTCTAGATATACATTCACAAA
AAAGGAAGAGCGTCAGAAAGATGGTCACGAAAAATGAGTCGTATGGGATA
GAGCAGCATTGGCTTTTGTTAACGCGTCATGCCCCAGTCTTGCTTTAACC
TCAATATTGGAACCCATCCTTTTCTAGTCCCTATTCGCTCCTCTGATCGC
TTCCGTATTCCCTTGCCAGCGATCAGAAGAGCTATCCAAAACTAGAAAAA
GATATCAGACTATGATAAACGATAAATGAGGATCAATTAAGTTTCCGATT
CTGGCTTAAATTTTACTGACATGTAATGCCCAGTGAGCCCCACAACACAC
TTTACTGATAGACAATAGACGTGTGCAGTATCATCATTATTATATCCCTT
TAGTATTCTGTGCATGCTGGCTTTTGTAAACACCTCGCTGATGCATATGG
GCATAGATTTCAACCCATGAGAAAAATGTTACAAGAAGATGCGAAAGAAC
AAAAATAATGAATTTATCGTTTGGTATACCATGTTCTGTAAGTTCAGTCA
TTTATAAATCCTTCCTGACCGCTTAGGTTTCAAAATGAAAGCAACTTTTC
TTGGGATCAACTTTTTGCACGCTCTCATCAATTTTGCAGTGACCGGAGGA
TGTCATCCATGTTATCAAATCATTATGGCCTTAACAAGAAAAAAGATGAG
GGTCACGAACAATGAATCTTATAGAATGGCAGTACATGTATCACCTTTTG
TCGAAAGGTGTCTAAGACGAGTATTGCTCGTAGACCTCTTTTGCTGCAAT
AAATGGCGGTTGTACCAAAATTGAA Coding sequence (CDS) from alignment at Sc0000049:1216791..1220215+ >BlTCONS00062112 ID=BlTCONS00062112|Name=BlTCONS00062112|organism=Branchiostoma lanceolatum|type=CDS|length=309bp|location=Sequence derived from alignment at Sc0000049:1216791..1220215+ (Branchiostoma lanceolatum)
ATGAAAGGTCTGTTTAGCATGTACATGGTGGACTGCAAGATCATGAAGAC
AGGAATGGACACTGCACACGGCCACGAAGGATTAGGGAAGGTGGTGGCAG
GTTTTCACGCTCTCGGTGTGACGACCGTGGAGAGGAAGTCAGAGGAAGTC
GGACCAATGGGCAGTGACGTCATGTACGAGCGAGGCGTCTACACTATGAA
GACCGAGGACGGCACCCTGGCTGACAACGGGAAGTACATTGTGATTTGGA
AGAAAATTGGCAGTGACTGGTTCCAGTACATCGACATCTTCAACACAAAC
AACGCCTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00062112-exon-Sc0000049-1564993656:1216791..1217897 | BlTCONS00062112-exon-Sc0000049-1564993656:1216791..1217897 | Branchiostoma lanceolatum | exon |
| BlTCONS00062112-exon-Sc0000049-1564993656:1218538..1218691 | BlTCONS00062112-exon-Sc0000049-1564993656:1218538..1218691 | Branchiostoma lanceolatum | exon |
| BlTCONS00062112-exon-Sc0000049-1564993656:1219341..1220215 | BlTCONS00062112-exon-Sc0000049-1564993656:1219341..1220215 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000049 | genome | Sc0000049:1216791..1220215 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF030609 |
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