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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000049:1198937..1204250+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00062100 ID=BlTCONS00062100|Name=BlTCONS00062100|organism=Branchiostoma lanceolatum|type=mRNA|length=5314bp|location=Sequence derived from alignment at Sc0000049:1198937..1204250+ (Branchiostoma lanceolatum)
GTCCACGGCATCTTGAGACCTATTGTTACACGTAGCCTGAGCGGAGCACC
GTATTTCCCACCATTATGGCAGGTATTAAGACGTTTAACATAGTACAGCT
GCTGAAAGGCTGGTCTTTCTCGACTATCATGGCCTTGCACAATACTCGAT
GTGACTTGTTCGGAGTGCATACTGGTGTATTCTAGTATTCTCTTCTTGGT
AGACAGTCTAATCTAGTGCAGCATACAATCTTGTGGGCGTGGCAGCGATA
AGCTAGGCACACTACACTGTGATACCCAACCTGTGACCCGAGAATGTTAT
GTTTTCGTCAGCCGTTCTTGTGTGTGTGTCTATCTGTATGTGTGTGTGTG
TGTGTGTGTGAACACGATAACGCACTGAAGAATGCCTGGATGGATTATCT
AGATACTTGGTATGTGGGCGGTGGGTAGGTCTTCTTGAGACCTCGAAATG
ATTAGATTCTTGGCCCCATAGCGGCTTGCTATGGTACTACAGCAGAACTT
CCGGGTTTGAGGACGTTATTTGCATAAAAATGAGAAACATTAAGGATATG
GCACTCGAAAAGTGGTCGTGGAAGTCATTTGCGATTCTCGAGCAATAAAG
TTCATTCATTCATTCATTCATTCATCAATCATTGTCTCCGATATCGTCAC
GTCATTATCATGATAACGTTATCTGTGCATGTAACTTCGTCTCTAGACCT
GAAGGCAGTGATTGCGGCAAACAATGAGAAGTTCATGGCCTGCTTCAAGG
CTAACGACATGAAGGGTCTGGCTGCCCTATACACGGAGGACTGCAAGTTA
ATGCCGACAGGATCGGACACTCTGCACGGCCGAGAAGGTAAGGGATTGCC
GAATCACTGATGATGAATCTTTTGATGGCTACTACACTTAAGAAAATTGA
AATCTTAGATCTATCAAAATTAGAGACCAAAATATTCCCTTTCAGCTTTG
TGTCTTTGCCAAAACTTTTCCCGGCTACTGTATCTCTCCCTGTCTCTCTC
TCTGTGCTGTTTCTCTGTCTCTCTCCGGTTTCTGTCTGTCTCTCTCTCTG
TCTGTCTCTTTCTCTCTGTCTCTCTTTGTCTCTCTCCTGTGCGTGGGGAT
GGAGGTGTCAAGAACGTACGCAAAGATACCGATGGCAATCAAATTACCTA
AATCAATTTTTTGCTGAGTACAGGCCCGGAAAAGGTGTTTTCTGGTGCCT
GGGCCGGCGGTGTGCGGGCCGTGGAGTTGAAAATAGAGGAGGTTGGGCCG
ATGGGCAGTGACGTCATCTACGAGCGTAGCACCTACACTATGAAGACAGA
GGACGGCAGTGTGTTTGACGCTGGCAAGTAAGTCAGCATGCGTCGTGCAT
GTTTATGTGTGCTGTTCGTTTCTTTATATTTTGTTTTCATACAGTAAACG
GTGTAGAACATGTACCATAATGTTGACTGATAACTTCCTGGATTGACACA
ACATTTTAAGAGAGATCATTATGCTTCGCTAAAAACACGCGTGTTGTTTC
TTCAGGCTAAAATTCTCTACTGCTTACGAACTAAGTCGAGCTCGCTCTGA
ACCTTTCAGTGACTAATATTTCCCCTTTTTAAGTCGTTCTGACAAAACCG
TCCAAACCGTAACAAACTTCCCTTCATCTTGCTTGTTTGAAATGTCTGCA
ATGTCTATTATGTACTACCAACATTCTGAAATAATATATTTAGAAATATT
TACTCTTTTTTTCTTCACATTTTACAGGTTCGTTGTGATCTGGAAGAAAG
TTGGCGGAGAATGGTTCATGTACATCGATATCTTCAACTCAAACAAAGCC
TGAAGATTCTAGATCTACATTTAAAAAAATGAAAATGATCACGGAAATTT
ATTCACAAAATGTGATCGGAAATCGTATAGAATGGCACAGTGCTAGTATA
AGCTATTGTCGTTGTGGTCAGTAGTACCAGTCTATGTTGATTGATATCAT
GATCTTTTGCTATAATAAATGGCGGTTATGCCAACTACGTTTACAACTAT
GGCCTGATTTCCATAGGCATGTAAATTGTAATGTCAATTTAAACCCAGAG
CACGTTTTGCTGACAGACAAGTGTGCAGTTCGTTCAAACCCTTGTAGTGT
CTAGGCCTAGTGTCACATAGTAGCAGGGTATATTTTCACGGGTTGTTAGC
CTTTCCCCTTTAACGCTAACGTGATCGATGCACCCCATCGAACACAGACC
CCATTTTACGTCCCTTCCGAAAGACAATGCAGCCCCTACCGAGATGTTGA
AATAATGACATCTTGTTTTCCTCCACTTTCCCATACCATTACATGTATTA
CTGACATATACTGGAACCGTGTAGTCGCCTCTCGAGCTGGACGGTTCTGT
TTGTACCGAAGTAAAAATTCGCGCAACAAAGTTCAGATGTCATAGTTCAT
CGTTAACGCATCTTGTCGGACAAGTTTCCTGTAGTTGACAGCCAAGTTTA
ACATTGTCAGCAGTGCACCGTATTCCCAACATAATGGCAGGTAAGGCGTT
TATAAACATTTCTGTGTACAACTGTTCAAAGACTAGTCTTTCTCGACAAC
GAAGTTTGGTCTTGAACCTGACACAAAATCAAGCTCAGTGTGACACCAAG
GCTTGCACGAACTGCCATACTAGTATCTAGCGCCAGCACAGCATGATCTA
GTGGGTGTGGCACGAACTTTGGGGCATGAACATTGCCTGCCATGTCTCAG
CCCCATGTAGTTATGTGCCCATGTTAGTAGAGGAACACAGGAGCATGCTC
GAATAAGGCTAGGGACAGGCGATATTGACATGACAGACCAGGGAACCTTA
CCTTAGTCTATCACTTCCGTGTACGGGCCGTTCTGAGGAGCATGCATTCA
ACATAATTCGCGTACAACATAGCTAAGTGTGTCAGAGGGTGATTCGATAC
AGAAGAAGGTGTATGTTGATCATCTTTGGAACTAAATAGAATATGACTTT
CCATCAGCCTCTCAGTGCTTAAGAGGTCTCCAACTAAGTTCGTTTGTTTT
GGTTCCAGCCACATTTCAACGTCAAAGGTCAGCGCATTTGTTTACCACAG
CCAGTTCTGTTTACCACATCCAGTGTCTCGGATACATACTATGTGTAGTG
TCGTTGCAGTCTGCTATACTATTATTAATAGTGTTAACTGTTTACAATCT
GTAGCTCTCAGTATGTACCCTATTAGGCTGATTCGTTAACGTGCTCGACG
TGTGGCTCTCCTCAAACACTGGTCCTCCGGCTTTACGTCACACCGAGAGG
ATATTCCGAACCGAAGCTAGGTACTCATTTTCACCCGAGTCGAGTGAGGA
AATATGTGTTAAGTGCTTTTCCTAGGGGCACAGCACTGGGGCCTGCCAGG
GATTCGAAACCAGAACCATTAGGTTTAAAGTCAACAACCCTGACCACAAG
ACAACCTACACCTTGAAAATCATCTAAGACTATATCATGACAGGTACTAC
GTACCTGGTACTTCACTATATCCGATATCGTAATCTCAGTGTCATACCTG
TACGTGTAACCTCGTCTGCAGATCTGAAGGCACTGATTGACGGGAAGAAC
GAGAAGTACTATGCCTGCTTCAAGGCTAACGACATGAAGGGCGTGGCTGC
CCTGTACACGGAGGACTGCAAGATCATGGTGACAGGAATGGACACTGTAC
ATGGCCGTGAAGGTGAGGGTATAGCCAAATTATGGAGCATTGGTGGGTAT
TGCACTTTGAACTAAATCATAATGGGAAAACTCTAAAAATTAGAGACCAG
AATATTGCCCCCTCTCTGTATCTCTTATATAAATATATTGGTATGTGTAC
GTGTTAGTGTGTGTGTTTTTGTGTTTGTTTGTTTGTATGTGTGTGTATGT
AGTACGTGAGTACGTCTGTGTGTGTGCGTGTGTGTGTATGTGTGTGTGTG
TGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGA
AAATCTCATCGCAAACACACTTGGAGTATAATGAATTACCAAACTTTATT
GACTGCAGGCGTAGAGAAGGTGGTATCAAACTATCGGGTGGCTTATGGTG
TGATGACCTTGGAGTTGAAATCAGAGGAAGTTGGACCAGTGGGAGGTGAC
GTCACTTACGACCGAGGCACCTACACTGCAAAAACAAAGGACGGCACCGT
AGCTGACACCGGCAAGTAAGTCAACATGTTTATGCTTGTTGTTCATTACC
TTCGTCAAGAAGGTTATGCATTCATGTGTGTGTGTGTGTGTGTGTGTGTG
TGTGTGTGTGTGTGTGTGTGTGTGTGAACAGCATAACTCGAGAAGTCTTG
AATTGAACTTTAAATAAATTAAAACATATACATATAAGTGACAAAGGTGA
AAGAGAAAAGTTCCTGGGTTAAAAAAAGCATGTTGCTGACATTGTACTTT
TCTACAAAGAAAAGCTTGTTGTTTCTCCAGGCTGAATGGTCTATCAAACT
GCTTACGTACTGAGTGAAGCTCACTCCGAACATTTCAGTTCACATCATTT
TCTATTTTGAATCGTTCTGACGCTACACAAAAGCGATCAAACTTAAAGAA
ATTGTACCTTTCACCTTATCGTACCTATTTGAAATGTCTGCAGTGTCTAT
AATATACTAGCGACATGCTGAAATTGCAGTTATGTTAAGAATATAACTTC
AAGATTTTTTTCTTGACATCTTTCAGGTACGTTGTGGTTTGGAAGAAAGT
TGGCGAAGACTGGTTACTCTACATTGACATCTTCAACACAAACAAAGCCT
GAAGATTCTAGATCTACATTCACAAAAAGGAAGAGCGACAGAGAGGTGGT
CGCGAAAAATGAGTCACGTAGAATAGAGCAGCATTGGCTTTTCCCAGTCT
GACTTTAACCTCAATTATCAATCTATTGACTGGTCTTGCTGAAATGAATT
AGCCCGGCACCCATCCTATTCTAGTCCCGGTTCGCTCCTCTGATCGCTTC
CGAATTCCCTTGCCAGCTATCAGAAGAGCGATCCAAAGCTAGAAAAAGAT
AGATATCAGACTATGATATACAATAAATGGCGATCAATTAAGTTTCCAAT
TCTGGCTTGATTTTTGCTGACATGTAATGCCTAGTTAGCCCCACAACACG
CTTTAACTAGTAGACAAAGCTTGCAGTAACATCAAAGTAATATCCTATTG
GTATTCTGTGTATGCATAACAACATTAACTTCCTTTACTGATCGGTATAA
TAATCCACTACGTTTGATGTTATAGATTGTAATGCTAAAACTGAAATGTT
ACGACTAACGTTAACAACTACAACTAAAATGTCATAACTTGATCAACTCA
TACCGAGGACTATT Coding sequence (CDS) from alignment at Sc0000049:1198937..1204250+ >BlTCONS00062100 ID=BlTCONS00062100|Name=BlTCONS00062100|organism=Branchiostoma lanceolatum|type=CDS|length=381bp|location=Sequence derived from alignment at Sc0000049:1198937..1204250+ (Branchiostoma lanceolatum)
ATGGCAGATCTGAAGGCACTGATTGACGGGAAGAACGAGAAGTACTATGC
CTGCTTCAAGGCTAACGACATGAAGGGCGTGGCTGCCCTGTACACGGAGG
ACTGCAAGATCATGGTGACAGGAATGGACACTGTACATGGCCGTGAAGGC
GTAGAGAAGGTGGTATCAAACTATCGGGTGGCTTATGGTGTGATGACCTT
GGAGTTGAAATCAGAGGAAGTTGGACCAGTGGGAGGTGACGTCACTTACG
ACCGAGGCACCTACACTGCAAAAACAAAGGACGGCACCGTAGCTGACACC
GGCAAGTACGTTGTGGTTTGGAAGAAAGTTGGCGAAGACTGGTTACTCTA
CATTGACATCTTCAACACAAACAAAGCCTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00062100-exon-Sc0000049-1564993656:1198937..1199008 | BlTCONS00062100-exon-Sc0000049-1564993656:1198937..1199008 | Branchiostoma lanceolatum | exon |
| BlTCONS00062100-exon-Sc0000049-1564993656:1199633..1199773 | BlTCONS00062100-exon-Sc0000049-1564993656:1199633..1199773 | Branchiostoma lanceolatum | exon |
| BlTCONS00062100-exon-Sc0000049-1564993656:1200110..1200263 | BlTCONS00062100-exon-Sc0000049-1564993656:1200110..1200263 | Branchiostoma lanceolatum | exon |
| BlTCONS00062100-exon-Sc0000049-1564993656:1200664..1201426 | BlTCONS00062100-exon-Sc0000049-1564993656:1200664..1201426 | Branchiostoma lanceolatum | exon |
| BlTCONS00062100-exon-Sc0000049-1564993656:1202458..1202598 | BlTCONS00062100-exon-Sc0000049-1564993656:1202458..1202598 | Branchiostoma lanceolatum | exon |
| BlTCONS00062100-exon-Sc0000049-1564993656:1202945..1203101 | BlTCONS00062100-exon-Sc0000049-1564993656:1202945..1203101 | Branchiostoma lanceolatum | exon |
| BlTCONS00062100-exon-Sc0000049-1564993656:1203613..1204250 | BlTCONS00062100-exon-Sc0000049-1564993656:1203613..1204250 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000049 | genome | Sc0000049:1198937..1204250 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF030609 |
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