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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000049:1198912..1204250+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00062098 ID=BlTCONS00062098|Name=BlTCONS00062098|organism=Branchiostoma lanceolatum|type=mRNA|length=5339bp|location=Sequence derived from alignment at Sc0000049:1198912..1204250+ (Branchiostoma lanceolatum)
CGGGGTTCAGGCGTCACAGGTCAAAGTCCACGGCATCTTGAGACCTATTG
TTACACGTAGCCTGAGCGGAGCACCGTATTTCCCACCATTATGGCAGGTA
TTAAGACGTTTAACATAGTACAGCTGCTGAAAGGCTGGTCTTTCTCGACT
ATCATGGCCTTGCACAATACTCGATGTGACTTGTTCGGAGTGCATACTGG
TGTATTCTAGTATTCTCTTCTTGGTAGACAGTCTAATCTAGTGCAGCATA
CAATCTTGTGGGCGTGGCAGCGATAAGCTAGGCACACTACACTGTGATAC
CCAACCTGTGACCCGAGAATGTTATGTTTTCGTCAGCCGTTCTTGTGTGT
GTGTCTATCTGTATGTGTGTGTGTGTGTGTGTGTGAACACGATAACGCAC
TGAAGAATGCCTGGATGGATTATCTAGATACTTGGTATGTGGGCGGTGGG
TAGGTCTTCTTGAGACCTCGAAATGATTAGATTCTTGGCCCCATAGCGGC
TTGCTATGGTACTACAGCAGAACTTCCGGGTTTGAGGACGTTATTTGCAT
AAAAATGAGAAACATTAAGGATATGGCACTCGAAAAGTGGTCGTGGAAGT
CATTTGCGATTCTCGAGCAATAAAGTTCATTCATTCATTCATTCATTCAT
CAATCATTGTCTCCGATATCGTCACGTCATTATCATGATAACGTTATCTG
TGCATGTAACTTCGTCTCTAGACCTGAAGGCAGTGATTGCGGCAAACAAT
GAGAAGTTCATGGCCTGCTTCAAGGCTAACGACATGAAGGGTCTGGCTGC
CCTATACACGGAGGACTGCAAGTTAATGCCGACAGGATCGGACACTCTGC
ACGGCCGAGAAGGTAAGGGATTGCCGAATCACTGATGATGAATCTTTTGA
TGGCTACTACACTTAAGAAAATTGAAATCTTAGATCTATCAAAATTAGAG
ACCAAAATATTCCCTTTCAGCTTTGTGTCTTTGCCAAAACTTTTCCCGGC
TACTGTATCTCTCCCTGTCTCTCTCTCTGTGCTGTTTCTCTGTCTCTCTC
CGGTTTCTGTCTGTCTCTCTCTCTGTCTGTCTCTTTCTCTCTGTCTCTCT
TTGTCTCTCTCCTGTGCGTGGGGATGGAGGTGTCAAGAACGTACGCAAAG
ATACCGATGGCAATCAAATTACCTAAATCAATTTTTTGCTGAGTACAGGC
CCGGAAAAGGTGTTTTCTGGTGCCTGGGCCGGCGGTGTGCGGGCCGTGGA
GTTGAAAATAGAGGAGGTTGGGCCGATGGGCAGTGACGTCATCTACGAGC
GTAGCACCTACACTATGAAGACAGAGGACGGCAGTGTGTTTGACGCTGGC
AAGTAAGTCAGCATGCGTCGTGCATGTTTATGTGTGCTGTTCGTTTCTTT
ATATTTTGTTTTCATACAGTAAACGGTGTAGAACATGTACCATAATGTTG
ACTGATAACTTCCTGGATTGACACAACATTTTAAGAGAGATCATTATGCT
TCGCTAAAAACACGCGTGTTGTTTCTTCAGGCTAAAATTCTCTACTGCTT
ACGAACTAAGTCGAGCTCGCTCTGAACCTTTCAGTGACTAATATTTCCCC
TTTTTAAGTCGTTCTGACAAAACCGTCCAAACCGTAACAAACTTCCCTTC
ATCTTGCTTGTTTGAAATGTCTGCAATGTCTATTATGTACTACCAACATT
CTGAAATAATATATTTAGAAATATTTACTCTTTTTTTCTTCACATTTTAC
AGGTTCGTTGTGATCTGGAAGAAAGTTGGCGGAGAATGGTTCATGTACAT
CGATATCTTCAACTCAAACAAAGCCTGAAGATTCTAGATCTACATTTAAA
AAAATGAAAATGATCACGGAAATTTATTCACAAAATGTGATCGGAAATCG
TATAGAATGGCACAGTGCTAGTATAAGCTATTGTCGTTGTGGTCAGTAGT
ACCAGTCTATGTTGATTGATATCATGATCTTTTGCTATAATAAATGGCGG
TTATGCCAACTACGTTTACAACTATGGCCTGATTTCCATAGGCATGTAAA
TTGTAATGTCAATTTAAACCCAGAGCACGTTTTGCTGACAGACAAGTGTG
CAGTTCGTTCAAACCCTTGTAGTGTCTAGGCCTAGTGTCACATAGTAGCA
GGGTATATTTTCACGGGTTGTTAGCCTTTCCCCTTTAACGCTAACGTGAT
CGATGCACCCCATCGAACACAGACCCCATTTTACGTCCCTTCCGAAAGAC
AATGCAGCCCCTACCGAGATGTTGAAATAATGACATCTTGTTTTCCTCCA
CTTTCCCATACCATTACATGTATTACTGACATATACTGGAACCGTGTAGT
CGCCTCTCGAGCTGGACGGTTCTGTTTGTACCGAAGTAAAAATTCGCGCA
ACAAAGTTCAGATGTCATAGTTCATCGTTAACGCATCTTGTCGGACAAGT
TTCCTGTAGTTGACAGCCAAGTTTAACATTGTCAGCAGTGCACCGTATTC
CCAACATAATGGCAGGTAAGGCGTTTATAAACATTTCTGTGTACAACTGT
TCAAAGACTAGTCTTTCTCGACAACGAAGTTTGGTCTTGAACCTGACACA
AAATCAAGCTCAGTGTGACACCAAGGCTTGCACGAACTGCCATACTAGTA
TCTAGCGCCAGCACAGCATGATCTAGTGGGTGTGGCACGAACTTTGGGGC
ATGAACATTGCCTGCCATGTCTCAGCCCCATGTAGTTATGTGCCCATGTT
AGTAGAGGAACACAGGAGCATGCTCGAATAAGGCTAGGGACAGGCGATAT
TGACATGACAGACCAGGGAACCTTACCTTAGTCTATCACTTCCGTGTACG
GGCCGTTCTGAGGAGCATGCATTCAACATAATTCGCGTACAACATAGCTA
AGTGTGTCAGAGGGTGATTCGATACAGAAGAAGGTGTATGTTGATCATCT
TTGGAACTAAATAGAATATGACTTTCCATCAGCCTCTCAGTGCTTAAGAG
GTCTCCAACTAAGTTCGTTTGTTTTGGTTCCAGCCACATTTCAACGTCAA
AGGTCAGCGCATTTGTTTACCACAGCCAGTTCTGTTTACCACATCCAGTG
TCTCGGATACATACTATGTGTAGTGTCGTTGCAGTCTGCTATACTATTAT
TAATAGTGTTAACTGTTTACAATCTGTAGCTCTCAGTATGTACCCTATTA
GGCTGATTCGTTAACGTGCTCGACGTGTGGCTCTCCTCAAACACTGGTCC
TCCGGCTTTACGTCACACCGAGAGGATATTCCGAACCGAAGCTAGGTACT
CATTTTCACCCGAGTCGAGTGAGGAAATATGTGTTAAGTGCTTTTCCTAG
GGGCACAGCACTGGGGCCTGCCAGGGATTCGAAACCAGAACCATTAGGTT
TAAAGTCAACAACCCTGACCACAAGACAACCTACACCTTGAAAATCATCT
AAGACTATATCATGACAGGTACTACGTACCTGGTACTTCACTATATCCGA
TATCGTAATCTCAGTGTCATACCTGTACGTGTAACCTCGTCTGCAGATCT
GAAGGCACTGATTGACGGGAAGAACGAGAAGTACTATGCCTGCTTCAAGG
CTAACGACATGAAGGGCGTGGCTGCCCTGTACACGGAGGACTGCAAGATC
ATGGTGACAGGAATGGACACTGTACATGGCCGTGAAGGTGAGGGTATAGC
CAAATTATGGAGCATTGGTGGGTATTGCACTTTGAACTAAATCATAATGG
GAAAACTCTAAAAATTAGAGACCAGAATATTGCCCCCTCTCTGTATCTCT
TATATAAATATATTGGTATGTGTACGTGTTAGTGTGTGTGTTTTTGTGTT
TGTTTGTTTGTATGTGTGTGTATGTAGTACGTGAGTACGTCTGTGTGTGT
GCGTGTGTGTGTATGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGT
GTGTGTGTGTGTGTGTGTGTGTGGAAAATCTCATCGCAAACACACTTGGA
GTATAATGAATTACCAAACTTTATTGACTGCAGGCGTAGAGAAGGTGGTA
TCAAACTATCGGGTGGCTTATGGTGTGATGACCTTGGAGTTGAAATCAGA
GGAAGTTGGACCAGTGGGAGGTGACGTCACTTACGACCGAGGCACCTACA
CTGCAAAAACAAAGGACGGCACCGTAGCTGACACCGGCAAGTAAGTCAAC
ATGTTTATGCTTGTTGTTCATTACCTTCGTCAAGAAGGTTATGCATTCAT
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
GAACAGCATAACTCGAGAAGTCTTGAATTGAACTTTAAATAAATTAAAAC
ATATACATATAAGTGACAAAGGTGAAAGAGAAAAGTTCCTGGGTTAAAAA
AAGCATGTTGCTGACATTGTACTTTTCTACAAAGAAAAGCTTGTTGTTTC
TCCAGGCTGAATGGTCTATCAAACTGCTTACGTACTGAGTGAAGCTCACT
CCGAACATTTCAGTTCACATCATTTTCTATTTTGAATCGTTCTGACGCTA
CACAAAAGCGATCAAACTTAAAGAAATTGTACCTTTCACCTTATCGTACC
TATTTGAAATGTCTGCAGTGTCTATAATATACTAGCGACATGCTGAAATT
GCAGTTATGTTAAGAATATAACTTCAAGATTTTTTTCTTGACATCTTTCA
GGTACGTTGTGGTTTGGAAGAAAGTTGGCGAAGACTGGTTACTCTACATT
GACATCTTCAACACAAACAAAGCCTGAAGATTCTAGATCTACATTCACAA
AAAGGAAGAGCGACAGAGAGGTGGTCGCGAAAAATGAGTCACGTAGAATA
GAGCAGCATTGGCTTTTCCCAGTCTGACTTTAACCTCAATTATCAATCTA
TTGACTGGTCTTGCTGAAATGAATTAGCCCGGCACCCATCCTATTCTAGT
CCCGGTTCGCTCCTCTGATCGCTTCCGAATTCCCTTGCCAGCTATCAGAA
GAGCGATCCAAAGCTAGAAAAAGATAGATATCAGACTATGATATACAATA
AATGGCGATCAATTAAGTTTCCAATTCTGGCTTGATTTTTGCTGACATGT
AATGCCTAGTTAGCCCCACAACACGCTTTAACTAGTAGACAAAGCTTGCA
GTAACATCAAAGTAATATCCTATTGGTATTCTGTGTATGCATAACAACAT
TAACTTCCTTTACTGATCGGTATAATAATCCACTACGTTTGATGTTATAG
ATTGTAATGCTAAAACTGAAATGTTACGACTAACGTTAACAACTACAACT
AAAATGTCATAACTTGATCAACTCATACCGAGGACTATT Coding sequence (CDS) from alignment at Sc0000049:1198912..1204250+ >BlTCONS00062098 ID=BlTCONS00062098|Name=BlTCONS00062098|organism=Branchiostoma lanceolatum|type=CDS|length=378bp|location=Sequence derived from alignment at Sc0000049:1198912..1204250+ (Branchiostoma lanceolatum)
ATGGCAGACCTGAAGGCAGTGATTGCGGCAAACAATGAGAAGTTCATGGC
CTGCTTCAAGGCTAACGACATGAAGGGTCTGGCTGCCCTATACACGGAGG
ACTGCAAGTTAATGCCGACAGGATCGGACACTCTGCACGGCCGAGAAGGC
CCGGAAAAGGTGTTTTCTGGTGCCTGGGCCGGCGGTGTGCGGGCCGTGGA
GTTGAAAATAGAGGAGGTTGGGCCGATGGGCAGTGACGTCATCTACGAGC
GTAGCACCTACACTATGAAGACAGAGGACGGCAGTGTGTTTGACGCTGGC
AAGTTCGTTGTGATCTGGAAGAAAGTTGGCGGAGAATGGTTCATGTACAT
TGACATCTTCAACACAAACAAAGCCTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00062098-exon-Sc0000049-1564993656:1198912..1199008 | BlTCONS00062098-exon-Sc0000049-1564993656:1198912..1199008 | Branchiostoma lanceolatum | exon |
| BlTCONS00062098-exon-Sc0000049-1564993656:1199633..1199773 | BlTCONS00062098-exon-Sc0000049-1564993656:1199633..1199773 | Branchiostoma lanceolatum | exon |
| BlTCONS00062098-exon-Sc0000049-1564993656:1200110..1200263 | BlTCONS00062098-exon-Sc0000049-1564993656:1200110..1200263 | Branchiostoma lanceolatum | exon |
| BlTCONS00062098-exon-Sc0000049-1564993656:1200664..1200709 | BlTCONS00062098-exon-Sc0000049-1564993656:1200664..1200709 | Branchiostoma lanceolatum | exon |
| BlTCONS00062098-exon-Sc0000049-1564993656:1203659..1204250 | BlTCONS00062098-exon-Sc0000049-1564993656:1203659..1204250 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000049 | genome | Sc0000049:1198912..1204250 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF030609 |
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