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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000049:1019920..1023950+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00062055 ID=BlTCONS00062055|Name=BlTCONS00062055|organism=Branchiostoma lanceolatum|type=mRNA|length=4031bp|location=Sequence derived from alignment at Sc0000049:1019920..1023950+ (Branchiostoma lanceolatum)
CTCTGAGGTTTCATGTGACGTCATTCCTACTTCACAAACGACGCTCTCCT
TTGGCACGTGACTGTCTCCTCAGACTGGAAAGGACCGTACAGTAAGTACA
TATATATCGAAATCGAAGTGGCTTAAACTTTTCTGTAAAACGCCACAGTC
ATACGAGTTTTCAATCCAGGCTTCTAATATGCAGATAACCATCATTTTGT
AAAAATGTCACGTTAAATAGTTGTGTTAAAACTCTTTCCCCTTGTGTCTA
AGGTATTATGTATATATTGTCCTTGCTCACAAATAAGTCTTTTGTTGTGT
CTTTATTGTATGTTAACTTCCCGTTTATGTAAATAGATTTGCAAATTTAA
GTAATTTCTGTTTTCTCAATCATAGACTAGGCAACCGACGCTCCCCTCCC
CACCCTCTTGAACTACACACAGTGCAGAAGAAAAGTGGTTCATGGGGACA
AATAGTGATCTTGCCGGACAAGTCTACAGTGGTACTGCGTTTCTTTGATT
AGTTCGTCTAAATGGTGTTGTGATGAAATATTCATCCGTTAGTGAAGTAG
GGTGGTGATAAAGATGGAGGAAATAGCAAAAAGCAATCCTGGATGTTTTC
TAACTTTCGTAACTTTGTTGATTGGTTGCATGTCCATGGCTGCCATCTAA
CAGATTTCATGTGTACTGCAGGCGATAGCTGTAGAATCCTCCAGCCGCGG
AGGTGACCTGTGCCTTGACGTCACCAATAAACTTGGACTCAAGACGATTG
GCGGAATTAGTCTGTACTGCAGGGTAGCAGACAAAGGTGAGTATTATCGG
ACGATATATCTTTCAAATACAGCAGCGTCGCTGAATATAGATATGCTACA
ATATATTATGATGTGATGCGTTCATGGTTAAGTACTAGTCATAACGAATG
GTTATATCAGAACATTGGCCTAGAATACATTAGTATCCGCTGTATCTAAG
TGTGTAAATCTGTTTCAAACACCTTTGCAGTTGTCAGCATCCCACATGGA
GAATACTACTTTGACTTCCTCTGCAGTATCAGACCGCTCGCAGAATGGCT
CAGCTCGGAAGGTGCCTTTCTCCTTCCTCTTATTTTTATTCCACCATGTC
TCGGGGATTATTGCTGTCTGTGCATACGTATTGCGATATGTTTATAGTAA
GATTATTGGAATATGGGAAAGCCTTGTTCGAATCAATCAACACAACGTCA
TATATGACGTGTCCTAGTGCGGTACGAAGGAACGCTACTTCCTTACATGG
ACCTGTCCTTGGTGCTGAACTTGCCATCTGAACGGGTTACCGTAGCCCAT
AGCTACGAAGGCCCACAACGACAAAATTTGTCGCCCCTTTAAACAGTATC
ATCTAATTGGAGAGAACACGCCGAGTACGACCTGCTGTTCCGAAGGAAAG
TGTGGACTGACGTCATGGTGGGAGAAGATTCTGTGGCAGACATGCGCATG
CACTTCTTTCAGGTTTGTCCGCAGTTTTCACTACGCGCGCTTGAAGCGCA
GTGACATACAAATATGAACGCCATTATCAGAACCATTACTTGACAGATTG
ATTGTTTTGTTTATTTGTTTTTTTTTTAATACAGCCAATTCGACGACCGG
TTTTAATCCATCCCAACAATACGGGGGTTTGTTCGGCTCTTTAAAATCAC
AACTGCAAGTTATTTTTCGCAAAGGATTTCGGCATGTTTTGTGAAATTCC
CTACAATGTCGCATGAGAGCGCAATTACCACAGTTTGTCTTGTAACAGGA
ACTGGAGTCGTTTCTGAGCGGCCACCACAAGTGCAGTAAGAGCGAGGCTG
TCCAGCTGGCGGCGTACTTGTACAGGGTCAGGTTCGGACAGGCTGGCTTT
GAACTTCACGACGACAAGAAAACTGCGTAAGTCCTGGATACTATGCATAT
AGATATCAACATGTCTTTGCACAAATGTATGTTTCAAACGACTTCTTTTC
ACCTAATACCTCCAAGCTAGATTGAATGTTATAATTATCAATGAACTTGA
GGAACTTCTGTTTCTGTCGCTTATACAGTGTTATTAACGAAACTATGCTC
ATAATTGTTATCATTTTTTAGAGAGGTTCTGAAAGATCTCATTCCAAGAG
ACCTACTACAGATCGAGCCACCAGAGCACTGGAAACAGGTTAGGGCTACA
GCTATACATTCTGTAGGACTCTTTTTAGACGCCGTAAATGGTAGAAATTG
GCACCCTGCATCTCTGTGGCCTGCTGACTCATTTGGCAAATGCATATGAT
AGCCAATTTTGCTCAATTCTTAAATCATCGACTTGGTTCCAAGAGCTGTA
TAGCAGAGACTAGGCAAGGGCTATTTCAATTCTATTAAAGGCTTCCAAAG
CATCATCAGGACGTTGAAACTGGAAATGGTCAGTACAATTGCGCGGATGT
GGTCAGTACATTGAAAATACATAGAAACGTTATGATACTGTTTGAGAGTC
ACTGCTTTGTCTTACTCCGATACATTGTGAGCGCCTGCAATTACAAATCA
GGAGCCAAGACTGTTGCCAGAGTGTATTCTTTTTTCAATATGAAACGCTT
TCTCCAAGTTTGATATGGCTACTTCGTTGCGCTACATTGCAGGACATCGT
TGCAACGTTTAACCGCCACGCCGGGCTGAACAGAGATGACGCCAAGCTAG
CGTTCCTAAGACACGTCAGCACATGGCCCACCTTCGGTTCAGCATTCTTT
CACATTGAGGTAACGTTACATGTCATGAATCTCCAAGCAGATGTATGGCT
TTGTTGGTTGATCCTTTCACACCTCGTGCCTTACAGTGATACATTTTATT
TTCACTAGACGTCTCTGAACAGACAAGCTACATCATCACACGACGAAGTA
ATCTACTTCCCCGGCTGATTAAGAGAAAACTGAATAGTCAATAGACCCAT
GTATGGCCGTTCTAGGTACATTGTTGTTCTAGTGTCCTCTATACCATGTG
TTCTTTGTTTTTCGTACAGAGACACGACTACCGCAAGTACCCGGAAAAAC
TCATGGCCGCCGTCAACAGACGAGGACTAATGTTCATGGACCAGAACAGT
AAGGTAACGTGTAAAACTTCTGTCACAAGACGGCAGTGAAATAGACAGGT
GTCAATCTAAATCCTGATCCTAACTGTACATCACAATCAGCAGTTCAACC
AATGATATCATGGCTAGACCAATGAGAGAGTGGATTCATGTCCGTCAAAT
ATTTGTTATGTCTTTATTTTGCTTTCCTACGTTTTGCCGGAGGGAATGGT
CTACTATATGGTGGGTTGGAATCTTCTTGCCTGGATAGTTTCTGAATCTA
CGATGATAATATTTGAAACAGCGCTGTACGTTTTTGTGTTGACACGTAGA
ACACGATCGTCAGTCTGGCATTTGACGAGGTTGAGACGAGCGGCGACACC
AGGCACCTGTGGGTGACGGGGAACGGCCTGGAGAACACATGGCAGCTCAC
GACGTCGGCGGTAGGAGGCGCTTGTGATTCGTCCACTGACCAAATTATAT
CTCCCCCTTCCACTCTCTTTATAACATTTTTACAATACTGTATCACATGG
TTCACATCTATGATGATTTTGATATTTCATTTCCGTTCTTTCTTCTTTCA
CAGGCATCTCAGATCGACGACTTAGTGAAAGCTTATCAAGATTTTCGTGA
GAAAGAATCTTCTCTTACCAACAAAAGTGTCCTGGTATAAAGTATTAATA
CATGTAATAAACAGAAGACAACAGGTGGAGCACAAAGCTAAGGGCACAAC
GTTTCTTCTCATCAGTTCCCGGAGAAAAGAAATCTATGATAGTTCACGAC
AGGTTTATTTGTCATCTTGAGAACTTTTACGTTGTGTACATGTAACCAAA
ACTTTCCTAATGACCTTCATCGTGTTGTATATTTGCCGGACGGATGTAAT
GTTCTACTTATCTAACGTTAGGTAGTTTACCACTAAACTCAGAAGCGAAA
TCATATTCACAACTCATAGTAGGCAATGGAACATAGATGTACAAAATAAA
CTCGTTTTTCTACAATGTACTTCACCTCACT Coding sequence (CDS) from alignment at Sc0000049:1019920..1023950+ >BlTCONS00062055 ID=BlTCONS00062055|Name=BlTCONS00062055|organism=Branchiostoma lanceolatum|type=CDS|length=642bp|location=Sequence derived from alignment at Sc0000049:1019920..1023950+ (Branchiostoma lanceolatum)
ATGGTGGGAGAAGATTCTGTGGCAGACATGCGCATGCACTTCTTTCAGGA
ACTGGAGTCGTTTCTGAGCGGCCACCACAAGTGCAGTAAGAGCGAGGCTG
TCCAGCTGGCGGCGTACTTGTACAGGGTCAGGTTCGGACAGGCTGGCTTT
GAACTTCACGACGACAAGAAAACTGCAGAGGTTCTGAAAGATCTCATTCC
AAGAGACCTACTACAGATCGAGCCACCAGAGCACTGGAAACAGGACATCG
TTGCAACGTTTAACCGCCACGCCGGGCTGAACAGAGATGACGCCAAGCTA
GCGTTCCTAAGACACGTCAGCACATGGCCCACCTTCGGTTCAGCATTCTT
TCACATTGAGAGACACGACTACCGCAAGTACCCGGAAAAACTCATGGCCG
CCGTCAACAGACGAGGACTAATGTTCATGGACCAGAACAGTAAGAACACG
ATCGTCAGTCTGGCATTTGACGAGGTTGAGACGAGCGGCGACACCAGGCA
CCTGTGGGTGACGGGGAACGGCCTGGAGAACACATGGCAGCTCACGACGT
CGGCGGCATCTCAGATCGACGACTTAGTGAAAGCTTATCAAGATTTTCGT
GAGAAAGAATCTTCTCTTACCAACAAAAGTGTCCTGGTATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00062055-exon-Sc0000049-1564993656:1019920..1020010 | BlTCONS00062055-exon-Sc0000049-1564993656:1019920..1020010 | Branchiostoma lanceolatum | exon |
| BlTCONS00062055-exon-Sc0000049-1564993656:1020591..1020705 | BlTCONS00062055-exon-Sc0000049-1564993656:1020591..1020705 | Branchiostoma lanceolatum | exon |
| BlTCONS00062055-exon-Sc0000049-1564993656:1020900..1020980 | BlTCONS00062055-exon-Sc0000049-1564993656:1020900..1020980 | Branchiostoma lanceolatum | exon |
| BlTCONS00062055-exon-Sc0000049-1564993656:1021266..1021381 | BlTCONS00062055-exon-Sc0000049-1564993656:1021266..1021381 | Branchiostoma lanceolatum | exon |
| BlTCONS00062055-exon-Sc0000049-1564993656:1021668..1021795 | BlTCONS00062055-exon-Sc0000049-1564993656:1021668..1021795 | Branchiostoma lanceolatum | exon |
| BlTCONS00062055-exon-Sc0000049-1564993656:1021991..1022057 | BlTCONS00062055-exon-Sc0000049-1564993656:1021991..1022057 | Branchiostoma lanceolatum | exon |
| BlTCONS00062055-exon-Sc0000049-1564993656:1022512..1022628 | BlTCONS00062055-exon-Sc0000049-1564993656:1022512..1022628 | Branchiostoma lanceolatum | exon |
| BlTCONS00062055-exon-Sc0000049-1564993656:1022889..1022972 | BlTCONS00062055-exon-Sc0000049-1564993656:1022889..1022972 | Branchiostoma lanceolatum | exon |
| BlTCONS00062055-exon-Sc0000049-1564993656:1023269..1023379 | BlTCONS00062055-exon-Sc0000049-1564993656:1023269..1023379 | Branchiostoma lanceolatum | exon |
| BlTCONS00062055-exon-Sc0000049-1564993656:1023523..1023950 | BlTCONS00062055-exon-Sc0000049-1564993656:1023523..1023950 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000049 | genome | Sc0000049:1019920..1023950 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF030595 |
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