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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000049:1017969..1024853+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00062053 ID=BlTCONS00062053|Name=BlTCONS00062053|organism=Branchiostoma lanceolatum|type=mRNA|length=6885bp|location=Sequence derived from alignment at Sc0000049:1017969..1024853+ (Branchiostoma lanceolatum)
GTACTTTTGATAAACTTCAAACAACGCGTAACATCGGAATTTCGGCATAG
GGTCGTCAACTCAAGTCGATATCATGACAACATCTGCTGTCCTTTGTTGT
CTTCAGCAAATGAAACCAAGTCTCCGGTCAAATTGTATTTGTCCTACGCC
CCACGTGCCTGCTGGAATCGCATATTTCAGACTGCTATAGTGTCACCTAG
GCAACCCCAACTCCACGGGACTTCATACCCGCTCACAAAACAGGGCCGCC
TGAAGAAAAAACACAGAGAGGAACTCTGAGAGATTTTTAGGTAAATAAGT
GGTGAAGGAAGAACTGCTAAGGGTGATTTTACGTCTCAAAGGAAGTCTGT
GTTTCTGAGGAGAGTTTAGGATGTCCATGTCGCCGTTTTGTGATGTCACA
ACATGGGAGGAGTTTAGCTACGGCCACTTCAGGTACGGTACACAGTGGGT
TCGGTCTGTGTTTCTGCAAAAAGTCGTCCGTGAAAACAGCGTATCTTTCT
TGTTTTGCTTAATTTTGCACTACAACTGTAACGATATGGTACTAGTACTA
AACCACGTTGTACTACTCTATACTGTTGTAAAATGAGCGGAATCAAAAGG
TGAGATTAAGTGCTATCATGGTTATTAGATGTCGTTTGTGATGCCTGTCA
TTCAAACAGGGATCCAGACCCTACCACTCCTGACGAGGGGCGTACTGGTT
GCTGTGCAAGGGGTAGGACGGAAAAGGAACAGGAGATTTGGAGTTTCTCC
AGTAAACCTCTCGGCAAAGCCCTGCTGCGGACCGTGGCTGCCGACAGACA
GTTGTGTCAGGATGCCGTCACCATGTTCACGGACATTCTCCTCTACTCCG
CCAGGAAGTCTCTGAAGGACGTGTCCGAAGATACTCGACTGGTGGAACAT
ATCTTCAGACAGGTTATAAAACGGGTATGGATATATGCATGTCGTCCCCT
GTCGCACCAATAACCTCCTTGGTCATCACACAGTACACATAGTCGACCGT
GGCCTCCCGACCTTCCCCAGACAATGCTTTGGAGTAAGTCGGCGCAAGGC
CATCTGTTGTTGGAAGTTGATCGGCCAGGTTGCCAGCCTATTCAATTGTA
AATTTTGACAAATCAAAGTTGTTTGTGGTTGGGAGTCTATCTGCGAGGCT
CGGCCTACGAGTCTTTATAAGTCGTCTGCGCCAGCCGACTAGAATAGGAT
GGATTTCAGGCTACTCCCAACCCATTTCCGACTTTGGTTGGGGAGTGGTT
GTGACCGTGGCTTTCATACTCATTCCACAGCTTTTATTCCTTCCAATCAA
GAGCCTCTCTTCCGCCACTCATCCAAGTTCAGAGAGACGCCTGCTTCCAC
AATATTATATGGTCTACTTGCTCTATACTTTTAACATGATGTTGTTTTTT
GCACATATAGTGAAATGTACATTTTTTATCGCAGGAAAGTCTACAAGATG
AACTGTACTGCCAACTCGTCAAACAGCTGACAAACAATAAAAAGCGGTGA
GTTTACACATTGATACTAAATGATAGTTATGACCATATGAATATGTTTGA
TACGCAATGAAGATCGTATGAGCTTGTTTAACTTTTAGACCGTCTGCATC
AATTCAGCCAGATCTATTCCTACTTGCAGTTCCAATGAAGACCGCTGCTG
GGAACTTCTGTGGTTGTGTGCTGGGTGTTTTCCTTGCAGGTAGGTATAGC
ATAACAAGTATATTAAATGAATCACATATCATAAGATGTGACAAACTATA
GCTATGACTGTATGATACGATCGCATATAGTTCATTAATCTTTTTTGTCG
TCTCTGTCATAACTAACATTACGGTTAGCATCATAATTGTGTCATTGTCT
GTAGAATCATTTGTCAAATCACTTAATGACTGATGTTTCGACTTCCTGAG
TTATGTACATGTATAATGTTACATGCTTCGAATCATGATCCCACAGCCAG
CCTCTGAGGTTTCATGTGACGTCATTCCTACTTCACAAACGACGCTCTCC
TTTGGCACGTGACTGTCTCCTCAGACTGGAAAGGACCGTACAGTAAGTAC
ATATATATCGAAATCGAAGTGGCTTAAACTTTTCTGTAAAACGCCACAGT
CATACGAGTTTTCAATCCAGGCTTCTAATATGCAGATAACCATCATTTTG
TAAAAATGTCACGTTAAATAGTTGTGTTAAAACTCTTTCCCCTTGTGTCT
AAGGTATTATGTATATATTGTCCTTGCTCACAAATAAGTCTTTTGTTGTG
TCTTTATTGTATGTTAACTTCCCGTTTATGTAAATAGATTTGCAAATTTA
AGTAATTTCTGTTTTCTCAATCATAGACTAGGCAACCGACGCTCCCCTCC
CCACCCTCTTGAACTACACACAGTGCAGAAGAAAAGTGGTTCATGGGGAC
AAATAGTGATCTTGCCGGACAAGTCTACAGTGGTACTGCGTTTCTTTGAT
TAGTTCGTCTAAATGGTGTTGTGATGAAATATTCATCCGTTAGTGAAGTA
GGGTGGTGATAAAGATGGAGGAAATAGCAAAAAGCAATCCTGGATGTTTT
CTAACTTTCGTAACTTTGTTGATTGGTTGCATGTCCATGGCTGCCATCTA
ACAGATTTCATGTGTACTGCAGGCGATAGCTGTAGAATCCTCCAGCCGCG
GAGGTGACCTGTGCCTTGACGTCACCAATAAACTTGGACTCAAGACGATT
GGCGGAATTAGTCTGTACTGCAGGGTAGCAGACAAAGGTGAGTATTATCG
GACGATATATCTTTCAAATACAGCAGCGTCGCTGAATATAGATATGCTAC
AATATATTATGATGTGATGCGTTCATGGTTAAGTACTAGTCATAACGAAT
GGTTATATCAGAACATTGGCCTAGAATACATTAGTATCCGCTGTATCTAA
GTGTGTAAATCTGTTTCAAACACCTTTGCAGTTGTCAGCATCCCACATGG
AGAATACTACTTTGACTTCCTCTGCAGTATCAGACCGCTCGCAGAATGGC
TCAGCTCGGAAGGTGCCTTTCTCCTTCCTCTTATTTTTATTCCACCATGT
CTCGGGGATTATTGCTGTCTGTGCATACGTATTGCGATATGTTTATAGTA
AGATTATTGGAATATGGGAAAGCCTTGTTCGAATCAATCAACACAACGTC
ATATATGACGTGTCCTAGTGCGGTACGAAGGAACGCTACTTCCTTACATG
GACCTGTCCTTGGTGCTGAACTTGCCATCTGAACGGGTTACCGTAGCCCA
TAGCTACGAAGGCCCACAACGACAAAATTTGTCGCCCCTTTAAACAGTAT
CATCTAATTGGAGAGAACACGCCGAGTACGACCTGCTGTTCCGAAGGAAA
GTGTGGACTGACGTCATGGTGGGAGAAGATTCTGTGGCAGACATGCGCAT
GCACTTCTTTCAGGTTTGTCCGCAGTTTTCACTACGCGCGCTTGAAGCGC
AGTGACATACAAATATGAACGCCATTATCAGAACCATTACTTGACAGATT
GATTGTTTTGTTTATTTGTTTTTTTTTTAATACAGCCAATTCGACGACCG
GTTTTAATCCATCCCAACAATACGGGGGTTTGTTCGGCTCTTTAAAATCA
CAACTGCAAGTTATTTTTCGCAAAGGATTTCGGCATGTTTTGTGAAATTC
CCTACAATGTCGCATGAGAGCGCAATTACCACAGTTTGTCTTGTAACAGG
AACTGGAGTCGTTTCTGAGCGGCCACCACAAGTGCAGTAAGAGCGAGGCT
GTCCAGCTGGCGGCGTACTTGTACAGGGTCAGGTTCGGACAGGCTGGCTT
TGAACTTCACGACGACAAGAAAACTGCGTAAGTCCTGGATACTATGCATA
TAGATATCAACATGTCTTTGCACAAATGTATGTTTCAAACGACTTCTTTT
CACCTAATACCTCCAAGCTAGATTGAATGTTATAATTATCAATGAACTTG
AGGAACTTCTGTTTCTGTCGCTTATACAGTGTTATTAACGAAACTATGCT
CATAATTGTTATCATTTTTTAGAGAGGTTCTGAAAGATCTCATTCCAAGA
GACCTACTACAGATCGAGCCACCAGAGCACTGGAAACAGGTTAGGGCTAC
AGCTATACATTCTGTAGGACTCTTTTTAGACGCCGTAAATGGTAGAAATT
GGCACCCTGCATCTCTGTGGCCTGCTGACTCATTTGGCAAATGCATATGA
TAGCCAATTTTGCTCAATTCTTAAATCATCGACTTGGTTCCAAGAGCTGT
ATAGCAGAGACTAGGCAAGGGCTATTTCAATTCTATTAAAGGCTTCCAAA
GCATCATCAGGACGTTGAAACTGGAAATGGTCAGTACAATTGCGCGGATG
TGGTCAGTACATTGAAAATACATAGAAACGTTATGATACTGTTTGAGAGT
CACTGCTTTGTCTTACTCCGATACATTGTGAGCGCCTGCAATTACAAATC
AGGAGCCAAGACTGTTGCCAGAGTGTATTCTTTTTTCAATATGAAACGCT
TTCTCCAAGTTTGATATGGCTACTTCGTTGCGCTACATTGCAGGACATCG
TTGCAACGTTTAACCGCCACGCCGGGCTGAACAGAGATGACGCCAAGCTA
GCGTTCCTAAGACACGTCAGCACATGGCCCACCTTCGGTTCAGCATTCTT
TCACATTGAGGTAACGTTACATGTCATGAATCTCCAAGCAGATGTATGGC
TTTGTTGGTTGATCCTTTCACACCTCGTGCCTTACAGTGATACATTTTAT
TTTCACTAGACGTCTCTGAACAGACAAGCTACATCATCACACGACGAAGT
AATCTACTTCCCCGGCTGATTAAGAGAAAACTGAATAGTCAATAGACCCA
TGTATGGCCGTTCTAGGTACATTGTTGTTCTAGTGTCCTCTATACCATGT
GTTCTTTGTTTTTCGTACAGAGACACGACTACCGCAAGTACCCGGAAAAA
CTCATGGCCGCCGTCAACAGACGAGGACTAATGTTCATGGACCAGAACAG
TAAGGTAACGTGTAAAACTTCTGTCACAAGACGGCAGTGAAATAGACAGG
TGTCAATCTAAATCCTGATCCTAACTGTACATCACAATCAGCAGTTCAAC
CAATGATATCATGGCTAGACCAATGAGAGAGTGGATTCATGTCCGTCAAA
TATTTGTTATGTCTTTATTTTGCTTTCCTACGTTTTGCCGGAGGGAATGG
TCTACTATATGGTGGGTTGGAATCTTCTTGCCTGGATAGTTTCTGAATCT
ACGATGATAATATTTGAAACAGCGCTGTACGTTTTTGTGTTGACACGTAG
AACACGATCGTCAGTCTGGCATTTGACGAGGTTGAGACGAGCGGCGACAC
CAGGCACCTGTGGGTGACGGGGAACGGCCTGGAGAACACATGGCAGCTCA
CGACGTCGGCGGTAGGAGGCGCTTGTGATTCGTCCACTGACCAAATTATA
TCTCCCCCTTCCACTCTCTTTATAACATTTTTACAATACTGTATCACATG
GTTCACATCTATGATGATTTTGATATTTCATTTCCGTTCTTTCTTCTTTC
ACAGGCATCTCAGATCGACGACTTAGTGAAAGCTTATCAAGATTTTCGTG
AGAAAGAATCTTCTCTTACCAACAAAAGTGTCCTGGTATAAAGTATTAAT
ACATGTAATAAACAGAAGACAACAGGTGGAGCACAAAGCTAAGGGCACAA
CGTTTCTTCTCATCAGTTCCCGGAGAAAAGAAATCTATGATAGTTCACGA
CAGGTTTATTTGTCATCTTGAGAACTTTTACGTTGTGTACATGTAACCAA
AACTTTCCTAATGACCTTCATCGTGTTGTATATTTGCCGGACGGATGTAA
TGTTCTACTTATCTAACGTTAGGTAGTTTACCACTAAACTCAGAAGCGAA
ATCATATTCACAACTCATAGTAGGCAATGGAACATAGATGTACAAAATAA
ACTCGTTTTTCTACAATGTACTTCACCTCACTTGTATCTGTTTCGGTGTT
TTTATGAAATCTTAAAAGTATCAAAGCCAGGTTATTTGTCATATCCACTT
ACCTTACAGTAATGGTTGATCCCCTCAATGGTAAACCTCCCTCTCTTATT
CGTGATTTGTCCCGAAGAATGTTTGACGTTCTGACAGGTCAGTGCGAAGC
CTGCGTCATGTCCTGTCTCAGGGCAGACATCGGCAAACATCGGTAAACAT
CGGCAAACATCGCGTGTATTTGTTAGGACAGCGCACTGCAGGTGCAGGAC
TGGGAACGGGGACACGGGTTAAAGGTCGCCGTTGGCTCGCCTTTGAAGTG
AAATGTTGATATTATGTTTTCCTTCAAGCATATCGTTTTTCTTCGTTTCA
TATTCTTCTTCTCCGACAAAATATGAAAACACCAAATTACCACTCAGAAT
CGATAATGAAAAAAAAACCCTACTTCTTCATCTTTATCTAGTCCGATATA
ACGNAAGAGAGAACTGAATAGTCAATAGACCCATGTATGGCCGTTCTAGG
TACATTGTTGTTCTAGTGTCCTCTATACCATGTGTTCTTTGTTTTTCGTA
CAGAGACACGACTACCGCAAGTACCCGGAAAAACTCATGGCCGCCGTCAA
CAGACGAGGACTAATGTTCATGGACCAGAACAGTAAGGTAACGTGTAAAA
CTTCTGTCACAAGACGGCAGTGAAATAGACAGGTGTCAACCTAAATCCTG
ATCCTAACTGTACATCACAATCAGCAGTTCAACCAATGATATCATGGCTA
GACCAATGAGAGAGTGGATTCATGTCCGTCAAATATTTGTTATGTCTTTA
TTTTGCTTTCCTACGTTTTGCCGGAGGGAATGGTCTACTATATGGTGGGT
TGGAATCTTCTTGCCTGGATAGTTTCTGAATCTAC Coding sequence (CDS) from alignment at Sc0000049:1017969..1024853+ >BlTCONS00062053 ID=BlTCONS00062053|Name=BlTCONS00062053|organism=Branchiostoma lanceolatum|type=CDS|length=1395bp|location=Sequence derived from alignment at Sc0000049:1017969..1024853+ (Branchiostoma lanceolatum)
ATGTCCATGTCGCCGTTTTGTGATGTCACAACATGGGAGGAGTTTAGCTA
CGGCCACTTCAGGGATCCAGACCCTACCACTCCTGACGAGGGGCGTACTG
GTTGCTGTGCAAGGGGTAGGACGGAAAAGGAACAGGAGATTTGGAGTTTC
TCCAGTAAACCTCTCGGCAAAGCCCTGCTGCGGACCGTGGCTGCCGACAG
ACAGTTGTGTCAGGATGCCGTCACCATGTTCACGGACATTCTCCTCTACT
CCGCCAGGAAGTCTCTGAAGGACGTGTCCGAAGATACTCGACTGGTGGAA
CATATCTTCAGACAGGTTATAAAACGGGAAAGTCTACAAGATGAACTGTA
CTGCCAACTCGTCAAACAGCTGACAAACAATAAAAAGCGTTCCAATGAAG
ACCGCTGCTGGGAACTTCTGTGGTTGTGTGCTGGGTGTTTTCCTTGCAGC
CAGCCTCTGAGGTTTCATGTGACGTCATTCCTACTTCACAAACGACGCTC
TCCTTTGGCACGTGACTGTCTCCTCAGACTGGAAAGGACCGTACAACTAG
GCAACCGACGCTCCCCTCCCCACCCTCTTGAACTACACACAGTGCAGAAG
AAAAGTGGTTCATGGGGACAAATAGTGATCTTGCCGGACAAGTCTACAGT
GGCGATAGCTGTAGAATCCTCCAGCCGCGGAGGTGACCTGTGCCTTGACG
TCACCAATAAACTTGGACTCAAGACGATTGGCGGAATTAGTCTGTACTGC
AGGGTAGCAGACAAAGTTGTCAGCATCCCACATGGAGAATACTACTTTGA
CTTCCTCTGCAGTATCAGACCGCTCGCAGAATGGCTCAGCTCGGAAGTAT
CATCTAATTGGAGAGAACACGCCGAGTACGACCTGCTGTTCCGAAGGAAA
GTGTGGACTGACGTCATGGTGGGAGAAGATTCTGTGGCAGACATGCGCAT
GCACTTCTTTCAGGAACTGGAGTCGTTTCTGAGCGGCCACCACAAGTGCA
GTAAGAGCGAGGCTGTCCAGCTGGCGGCGTACTTGTACAGGGTCAGGTTC
GGACAGGCTGGCTTTGAACTTCACGACGACAAGAAAACTGCAGAGGTTCT
GAAAGATCTCATTCCAAGAGACCTACTACAGATCGAGCCACCAGAGCACT
GGAAACAGGACATCGTTGCAACGTTTAACCGCCACGCCGGGCTGAACAGA
GATGACGCCAAGCTAGCGTTCCTAAGACACGTCAGCACATGGCCCACCTT
CGGTTCAGCATTCTTTCACATTGAGAGACACGACTACCGCAAGTACCCGG
AAAAACTCATGGCCGCCGTCAACAGACGAGGACTAATGTTCATGGACCAG
AACAGTAAGGTAACGTGTAAAACTTCTGTCACAAGACGGCAGTGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00062053-exon-Sc0000049-1564993656:1017969..1018400 | BlTCONS00062053-exon-Sc0000049-1564993656:1017969..1018400 | Branchiostoma lanceolatum | exon |
| BlTCONS00062053-exon-Sc0000049-1564993656:1018628..1018892 | BlTCONS00062053-exon-Sc0000049-1564993656:1018628..1018892 | Branchiostoma lanceolatum | exon |
| BlTCONS00062053-exon-Sc0000049-1564993656:1019403..1019464 | BlTCONS00062053-exon-Sc0000049-1564993656:1019403..1019464 | Branchiostoma lanceolatum | exon |
| BlTCONS00062053-exon-Sc0000049-1564993656:1019598..1019657 | BlTCONS00062053-exon-Sc0000049-1564993656:1019598..1019657 | Branchiostoma lanceolatum | exon |
| BlTCONS00062053-exon-Sc0000049-1564993656:1019915..1020010 | BlTCONS00062053-exon-Sc0000049-1564993656:1019915..1020010 | Branchiostoma lanceolatum | exon |
| BlTCONS00062053-exon-Sc0000049-1564993656:1020295..1020400 | BlTCONS00062053-exon-Sc0000049-1564993656:1020295..1020400 | Branchiostoma lanceolatum | exon |
| BlTCONS00062053-exon-Sc0000049-1564993656:1020591..1020705 | BlTCONS00062053-exon-Sc0000049-1564993656:1020591..1020705 | Branchiostoma lanceolatum | exon |
| BlTCONS00062053-exon-Sc0000049-1564993656:1020900..1020980 | BlTCONS00062053-exon-Sc0000049-1564993656:1020900..1020980 | Branchiostoma lanceolatum | exon |
| BlTCONS00062053-exon-Sc0000049-1564993656:1021266..1021381 | BlTCONS00062053-exon-Sc0000049-1564993656:1021266..1021381 | Branchiostoma lanceolatum | exon |
| BlTCONS00062053-exon-Sc0000049-1564993656:1021668..1021795 | BlTCONS00062053-exon-Sc0000049-1564993656:1021668..1021795 | Branchiostoma lanceolatum | exon |
| BlTCONS00062053-exon-Sc0000049-1564993656:1021991..1022057 | BlTCONS00062053-exon-Sc0000049-1564993656:1021991..1022057 | Branchiostoma lanceolatum | exon |
| BlTCONS00062053-exon-Sc0000049-1564993656:1022512..1022628 | BlTCONS00062053-exon-Sc0000049-1564993656:1022512..1022628 | Branchiostoma lanceolatum | exon |
| BlTCONS00062053-exon-Sc0000049-1564993656:1024522..1024853 | BlTCONS00062053-exon-Sc0000049-1564993656:1024522..1024853 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000049 | genome | Sc0000049:1017969..1024853 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF030595 |
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