BlTCONS00062050 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00062050
Unique NameBlTCONS00062050
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000049:998228..1000595+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00062050 ID=BlTCONS00062050|Name=BlTCONS00062050|organism=Branchiostoma lanceolatum|type=mRNA|length=2368bp|location=Sequence derived from alignment at Sc0000049:998228..1000595+ (Branchiostoma lanceolatum)
AAAGTTCTCCAGAGATCGTGAGAAGCCATGGTGGAATATCGGGGACCCAG AAGAACGTGAGGCAGCACGGCTTCGCCAGCGGTCAAAGACAGACCTTCGA CCGACTGGGTCATCGAAGGGGGCGCCCGGGGCGACTTCAGCCTCCTTCAA ACAGCCCGGCGTCGAGAAACAAGTGAAGTACGACGTCGATAGATCCCCGG TGATGTTGCCTGGTCACTTCGGGGCGTCAACAGGAGTCCGGTCCAGGGCG AGCCGGCCGGACGTGGGATTAGTCCCGAAAAAACTGGAGATGGAATTCTT CGACTCGTCAGAAGACAGCGAAGACGAGATAGACTTGGACAAGCCTGTCT CAGTGGAGGATCTACAGGACGATGACTATTGGAGAGCCATGGAGAAAAAG GCCTACGCTATCGTAAAGGCAAGCGTGGATCAACTAGAGACGGTCGACGA ATCTCCTGAAGACGAGAAACCGGTACAGGAAGCTAAACCGACCGGGAAGA AGCTCAACAATTTATCTCAGATGTTCCAGTCAAGGAAAGAAAAGGAGAAG AGACGAGAGAGGGAAGCCAGAGAAATGGCAATGAAAGAGAAGGAGGAAAA GAAGACGCACATGTTCGAGCACAAATCGGACCCTCCGAACGAAGAATCGT TCATTGGCCCGCCGCTTCCACCGGAGATGTTGAAGAAGAGGGGCTTGACG CGCCATGGGCACGAGGGAGTGCCTACTCTAGCTGCCGAAAACACAAAAGA GGGAGAAGCGAGCACCTCTAAGAAGTCAGGCGGCAGGCTGACCCCCACTA AGCTAGTCAGAAAAATCAAAGGTGGCTTCGCAAAGGTCAAGGACTCGATC AAATCGAAGTTATCCGGAGAGTCGAGCGACTCAAGCTTCTACTCCGATGT CGAATGATTTGTCGACTTAACAAAATTCTCCGCGTGACAAAACAAAAAAC AAACAAAAAACACAAACTCACGTTTTATGTTTGGAGTTACATTACAGTAT CGGGAACATTGAGCATTGAAAAAAATGAAAGCGATGCATAATTGAAGCCC TGATGGAAAAGCATGAAAAATTAGATTTAACTGCATCTTAGGTCGCAAAG ACCTTACAAAAACTGAACTGCGCAGCGAGGGGACGCACTTAAAGTCGTGT CTATGTAAGTCAGACTACTAAATGCTGTAAGGCAATCATCAGTCCAAATG CTACCATGTATACATGAATGCGTGGCAACTAACTGTAAAGTTGTTTTACC AATGGTAGTGTTTGCTGTCAAGTAGTCTATCCGCGTCTGTGACCAGTACA GAAGTCCGCATAAGAAGCGGTAGTTTGTCAGCTACGTGTAACGTACTGTG CTAACGTACGTTTTCTTTCAAAGCCAATATAAGGAATTGTTCCATGTATA AGCACAGGTTGCTTTAAAAGGATTGCTACTGAGCTTCCTTCACGCATGTT AAATCCGTTATTCAAAGACTACAAACTGTGTATAGAAGATTACATGTGTA TATAAGATTATATGTAATGTGTACATAAGATTATATGTGTATATACATGT CTTTGTAAATTGTAAAGAGGGAGAGAGATGTGATATAATTTCATCCAGAA TAAAACTTCACGCTAACGTATTTTTGCCTGTCTTGCTGTTGCGTTTTGTT TTCCTATGGAAGCTTAGTCAGTATAGTCACGTGAGGTTGGGCTAGAGCAT TGTGGGTAATAGATAGAAGAGACCATGTCATTGTGAAATTTATTGACCAG GCAAAGCTCAACATCGTAGGTACTCTTGTCTCAACCACAGCGTGCATCAA AACATGCAATCTCCAAGCAGATGTTGGGAAGAGCATATCGTTTTCTTGCT GGTCCATTTTTTTCTGATATCCATTACTGTGAGAACTGGAAGTGAGAAAA TGCTGAAACACCCTTCCTTCAATCCCTTTAAATTTGAGAAAAAAGTCGGA AGCCCTGCATTTTCCAGATATTTGTACTAGGTGTATGTACATATCATTTG AATGGGTATATAACCAGTATTGTACTACTATACGTTATGTTACTAATATA TTTTCCTCAGTTATAAAGTATTTGATATGGGAATATACTGTATTTAGCTT CATATAGTTGTTAAAGAATGAAATCTTTGTGTTTTTTTCCAAATTAAAAA GTATCAGTGTTCCTAAGTCTCAAAGATGAAAAAATGAATCAAATAAAGTG TTCAGGAATATGGAATTTTGTCAAATTTCTTTAATTCCCATTTTACATGT ACATCATATGGGGAAATTCACTAATACAGTGAGTGAAAAATACATAAATG ATATCAATGTTAATTGAAATAGGAATAAATTCAGAATGTACAATTTGATT GAAATAACTGCATAGAAG

Coding sequence (CDS) from alignment at Sc0000049:998228..1000595+

>BlTCONS00062050 ID=BlTCONS00062050|Name=BlTCONS00062050|organism=Branchiostoma lanceolatum|type=CDS|length=906bp|location=Sequence derived from alignment at Sc0000049:998228..1000595+ (Branchiostoma lanceolatum)
AAGTTCTCCAGAGATCGTGAGAAGCCATGGTGGAATATCGGGGACCCAGA
AGAACGTGAGGCAGCACGGCTTCGCCAGCGGTCAAAGACAGACCTTCGAC
CGACTGGGTCATCGAAGGGGGCGCCCGGGGCGACTTCAGCCTCCTTCAAA
CAGCCCGGCGTCGAGAAACAAGTGAAGTACGACGTCGATAGATCCCCGGT
GATGTTGCCTGGTCACTTCGGGGCGTCAACAGGAGTCCGGTCCAGGGCGA
GCCGGCCGGACGTGGGATTAGTCCCGAAAAAACTGGAGATGGAATTCTTC
GACTCGTCAGAAGACAGCGAAGACGAGATAGACTTGGACAAGCCTGTCTC
AGTGGAGGATCTACAGGACGATGACTATTGGAGAGCCATGGAGAAAAAGG
CCTACGCTATCGTAAAGGCAAGCGTGGATCAACTAGAGACGGTCGACGAA
TCTCCTGAAGACGAGAAACCGGTACAGGAAGCTAAACCGACCGGGAAGAA
GCTCAACAATTTATCTCAGATGTTCCAGTCAAGGAAAGAAAAGGAGAAGA
GACGAGAGAGGGAAGCCAGAGAAATGGCAATGAAAGAGAAGGAGGAAAAG
AAGACGCACATGTTCGAGCACAAATCGGACCCTCCGAACGAAGAATCGTT
CATTGGCCCGCCGCTTCCACCGGAGATGTTGAAGAAGAGGGGCTTGACGC
GCCATGGGCACGAGGGAGTGCCTACTCTAGCTGCCGAAAACACAAAAGAG
GGAGAAGCGAGCACCTCTAAGAAGTCAGGCGGCAGGCTGACCCCCACTAA
GCTAGTCAGAAAAATCAAAGGTGGCTTCGCAAAGGTCAAGGACTCGATCA
AATCGAAGTTATCCGGAGAGTCGAGCGACTCAAGCTTCTACTCCGATGTC
GAATGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00062050-exon-Sc0000049-1564993656:998228..1000595BlTCONS00062050-exon-Sc0000049-1564993656:998228..1000595Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00062050BlTCONS00062050-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000049genomeSc0000049:998228..1000595 +
Properties
Property NameValue
GeneIDBlCUFF030593