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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000049:765250..771841+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00062029 ID=BlTCONS00062029|Name=BlTCONS00062029|organism=Branchiostoma lanceolatum|type=mRNA|length=6592bp|location=Sequence derived from alignment at Sc0000049:765250..771841+ (Branchiostoma lanceolatum)
TGCACGCGTCACGCAGAATGCAATGACCTTGACAACGTGCTGAATGATAT
CGACCTTTGACACGTCCGTGCGGACGTTTCTCACGTTACAGTTGTTTTGG
CGTCCATTACCAACTCCACTCCCATTTTAGACACCGGCTGTGCGATCACG
AGGTCTTTTGAATCTACAGCAAGCTTATTAGGAGGTAAGATGCCGTTAAT
GTTTATCTATATTCAAGCATGACTTGGAAGAATGATCCCCAATAAACGAC
AGACCTACAGAGTAGTTGTTATCATTGTGGAACTTAGCCTGGTAAACATT
CTCAACACGCCCAAGTCCTCCAAAGCAATGCCCTGCGAATTAATTGACAC
CAACCCCGTAAAAACACCCTACTTGCGGTAATCGCGCCTGGGCGGGCGGT
TACACTCCCAGCACCGTGGATCTATACAGGGGAGCCCCCGATGGCATGGT
TACCATGGTTGCTATGTGGAACAGTGAATAAGGCTATCGTAGCCGGAGAG
CGCCAATTTTACATGTTATGCCAGTCTTTGGGATTACGTATCATCATATC
ATTTTGCATTGTCCAAAATTTTAGTAGGATATCACTTCTTGCATGTAAGC
ATCATGTAACTCAGATGTATAAGAATTTTGTAACAAGGTTGTGTAATGCC
CCCCTCCCCCCTCCCAGTACCTCCTGGCCTTCGTTCCCATGTAGCGTACA
TCACCGTACCAACTCGGAAGTCGGATGACCTTGGGTTTTGCTATTTGGCC
AGAATGCCTTTGTAAAACCTTGATCTGGAGATACACTGTAGCAATCGTAA
GTTACAGCTTACCTCAAATGGAGATATGTTTTGGTATGTTTGTGTGTCTG
TGGTTTGTGTTTCAGCAACATTGGTCAGCATAAGTCAGGAAGCTAACGTT
AACATATATTGATGGCTTATGATGATATTTTCAAGTGTGTACTAGTATGT
GGGTAGGCCCTGAAAGGACAAATGTCGTGGTCGATTATCGGTACTACAGC
AGAACATGCGGGTTTTGTGTTTTTTTGTCCTGGACCTGCTATGCTCCTTA
TTTTTTAGTGGCAGATGGCTTGCGATGTCGGGAAAAAAATCTTAAAGTAC
AACATAGAATTATTTCCGTCATTGTTTCTTCGTTTGTTTGTGTTCTTTAG
GAACTCTCTTCAAATAAACAAAAATATGTCGACTGGATTCTACCTGTTCC
TGGCGGTTGCCGCCATCTTGTCTCAACATGTCCGAGCTGGCGACATCCTC
GTCGCGACAATGACGTACGGCAGCCCCTGGATGGACGTAGCGAAGATTGC
CGAAGCCTTGGCTTCCCGAGGACATGTCGTCACTGTGTTGGCCCATGCAA
GTCAGAAGAGCGACCTGATGCGGAAATGGCCGACCCTGCAGTACGAAACA
TTCGGAGATCCAGAAGAGACACCGTTGATTAAGGAACTCCTAAAAACTGT
GCCGACAGCCTTGGTGAGACCATCCATTGGCAAACATTTATAAACCAAAA
ACAAAGTACAAAGCATCCGACACATCTAACATCTTACAAAGGCCCTTAAC
TGCACTCTTCACAGCCTTCGTATACGAAACGTATATGTAGTCAACAGCTT
AACTGCGGTCCAATTGCAACTCAATAAACAAGTTTCACCGAAATCTCTGT
ACTGCAACTTTCATCAGGGTCCAATGATTAACCACTTAAATCACGTGGCC
TAATAGACACATGACGTCAGCAACTTACATCTCTATTGTCACAGGCATTC
CACACCCCTGGGCTACTAGGTCACTTGTCAATTGCCTCTACTTTTGCTTC
CGGACCTGTGGATCATACCGAGAAGATGTTAGGTGACAAGAAGCTGATGG
CGAAGCTGAAGAACAGTCACTACGACGTTGTCTTGACGTACCCTGGACCC
TCGGGTGGGTTCTTCGTGGCGCAGTACTTGGATCTCCCTCTGGTCTGCAC
AATGCGGTCCATGCCATCAGGACAAGGTGTGATCATTGTTACATCAACCT
TGATCTTTGGAACCATATGCTTTTCCTATAGACCAATTGCAAGCGCTTTT
AACATGCAATTTTACGCCCGTCAGATATGTTTTTACGCTAAATGGGGCTT
ATGATACCGTGTAGTATATGACACTGAAGTCTTGGTATCGCAGCAGCGGC
AATGTGTCCTAGATCTCACTTTCTTCACCGCATATGTAAATATGGATCCA
GTGAAGTATAGGATGCCTCCTTTCACAACGTTACCCTCATACATTTCTCC
TTAAAGTCTTAATATTCGTTTATAAGCCATGAAACCACTTGAAAATAAAT
GTATTATACGTTGCTGAAGTGTAGAAATTCCAATTACGGCGAAGTACCTA
GTTGTTTTTTTAAAATTTATTATGTTTAGCCATACCTAGTATGGCTAAAC
ATATTGTTTTTACTCATGTTTCTTCTTCTTCTTCTTCTTCTTCTTCTCCT
CCTGTCAAATCTTCAAATCGATTCATCTCTGTCATTTTTTGACCAAATGA
CCTGAAATTTGGTACAGAGGTAATGTAGGCAAAAACCAATGTGCGTTCTT
TTCCTTTTTTTGATATTGACCTTGAAAGTGATTTTATTGAGGTTTTTAGG
CTATTTTTAGCATATCTTGGCCTCCTGCGCCCTGGTATTTCAACCGAATG
ACCTGAAATTTGCTGTATATGTGGCTTGAACAAATATTTAAAGGACTACA
TTCCCATTTTTGGCATACATATATTCAAAACGATTTATTTTGGGCTTTCT
TGACAATATTTGCCACTTCTGTCACTTTCAATACTACATATGACCTAAAG
GTCATTGACCCCAAGTGCCTTGCACCTGGCCTTGCATGCCTGTGAGCCTT
GCGACCACCTGATTGGTCAATTGAGTTAATCTAATTAATTACATGGCACA
GGTGTAGGCTAGTATTCATGCCAAATATGGTGTGGGAATTCCTAGGACAT
GTGATTACATGTACATGGCTTTGTTCACTCTTTTTTTTTAAAAAGATACA
CATCTCCAGTTCATATATGTATTAAACCAAAATAATGTGAAATTTGGCAT
GTACACAGGCCCTCATTCAAATGTTTGCCATACAGCCTTTCACAACGATA
TTTTAAACAAAGAATTTTTTGGTTTCCGTATTTTCAACCCAAAGTGTATA
CTATTGAATCATGCATTCAAACAAAGGGGTGTCACATTTTTATATTTCAC
CCATTTTTGGTCATTTCCTTCTTCTCCTGTCAAATCTTCATATATATCAT
TATGTATACTATGGAAAACTTCATTCTTCCCTGGGGTTGATCTTTTTTAA
TTCAATTTTGAACTGGGTTGATTATGCGCAAGAGTGTAATTTTCAGCGGA
TATTTTTCCACTGGTCTAGTTTACATGGAGATGGCACGGAATATCCCATT
CTTGCAAGGGGAGGATTCTGTAATTATTTATTTCAATTTTGAGCTGGAAT
GATTATGAAAAAGTCCATTTGTTAGCAGAAGTGTATTTGTTAATTAATAA
GTGGATATGGTTTTGGACTGGTCCATATTGTGTTGAGGTGCTACTGGAAG
ACTCCACTCCTGTATGGAGAGACTGATAATTGTTTTTAAACTCAAGTTTG
ATCCATTTTTTTAGTGGAAGTATTTTAGAATGGTCCATTGTTATTTTGGG
AGTCCATTTTTTGCGTGGCGAGGAGCATGGCTAAACATGCTGTATTTGCT
CGCAAATGTTGCCTTTCTAGTATTCTTTTTTATTTCTATTTGTTCTGGTG
TTTCAGACATCCGTGCCACTGGTGTCCCCAACCCTCTTGCTTACGTGCCA
ACGGGGACATCGGGGTTGTCAGATCGGATGACATTTATGCAGCGGGTCAT
GAACGTGTTGCTTTACTTCACAACGACCACTGTGGGACAACTGGTCATGG
AGAGGGGATTCGACAATGTTGCAAGAAGGTTAGTGCATGTGTTAGGATGT
TTGGCATATAAAACAAAAAGGACGGTTATTGTGAAGTGGCTCTTTTTTCA
TATCAATTACATGTACTAAGAAATCACCTCAGTATTCCACAATATTTGGT
TAGTTTATAATGAATAAGCTACGGTCCTCTACTTTTGCTACTAAAAAGTG
TAAAGTGTACTTGATTATATATTGGCGATATAAAAGTCATGATAACAGAT
TACAACATTTCAACATCATGTTCAACGATATTAATGATATACGCGTAATT
TGTGCCAAATATGCGTCCTTTTCCTGTCAAATGTAAAAATGATAAATAAA
CATACATACATACTTACAACTCGGTGGTTTCCATTTTGTGTTTTTCAACA
TACAAGTTAGAAATACGATCAGAACGAAACTAACATTATTTTGCCACCAA
CAGAACCATTGGCGACAACTTCACCACGTCAGCTGCCCTTGCAAGAACCG
ACGTGTGGCTCTACCAATCAGATCTCATGTTCGACTTCCCTAAACCCATG
ATGCCAAATATGGTCAGCATAGCAGGGCACATGGCTGAGGACGTCAAGCC
GCTCAGTGAGGTCAGTCAACAAAAGACTAGCTAATATCAAATAACGTCTA
CATATCTCAAGGGTCGATTAAGTGTTTGCATGCGACGTACCCTCTCAAAG
ACGTACTTGTGCGATCTTTAAATTTGCACCTTTTCTGTTTTAACCAAAAC
CAAACATTGCGAAACCTAGTTTCATTACATTGTTAAAGATTGATCAAAAT
TATCAAACATTGTGTACGCAGCTCTGACCTGTATGTTCCACATCCAATAG
AATCTGGAAAAGTTTGTGCAGAGTTCTGGAGATGACGGTGTTGTACTTGT
AACGTTCGGCTCCATGATAGCGGCTATGCCCGCAGAGAAAGCCGACATGC
TGGCCGCTGCTTTTGCCCGTCTGCCGCAGAAGGTCGTGTGGCGCTTCGCT
GGGACGCCACCTCCAAGTCTGGGGTCCAACACCAAGACCATGGAGTGGGT
GCCTCAAAGCGACTTACTAGGTAAATCCAATCAATGTACTGTAGAGAATG
ATGTGGAATTCCTTATATGTTTTAGATCACACAATATGGAATCTTCTATA
ATTTGTTTGTTTCTATGGTACGGTGATAAGATGATCATAAAGCCACTATA
TAAACTACTGTATCACTTCATCCTGTCACTAACCATCAGATTTTTAACAA
AAAAATAGCTCATCCCAAGACAAAGACGTTTGTATCACATTGTGGTTACA
ACGGAGTAGCAGAGGCCATGTACCATGGGGTGCCCCTGGTCGGCATGCCT
CTGTACGCTGACCAATACGACAACATTGCCCGGATGGTGGCCCGTGGGAT
GGCGGTGTCACTGGACATTCACAGTGTGACGTCAGAGGAGGTTTACCAGG
CCATCACAACTGTTATTTCAGAGCCTAGGTAAGTCTGAGTACGTATGAGT
GAAACATCAGTAATCTGAAGCAAATTCTGGTCTTTGTGACCGGCTATTGG
GACATGTAAACATCGTAAAAGTTCGCATATTGGGGGATATGTGACGTAAT
GGACTCAAACTTTGCTGCACTTTGTTTCAGGTACAAGGAGAAAGCGGACC
AAGTCTCCACGCATCTTCGTGACCAACCACAGTCGCCCATGGAACGGGCA
GTATGGTGGATAGAACACGTCATCAAACATGGCGGCCTCCCCCATCTCAG
GTCGAGGGCGATCGAACTTCCCTTCTACCAGTACTACTTGTTAGACGTCA
TTGGCATGATTATTGCAGTTATATCTGCTGTATTGCTGTCTTGTTTGAAG
TGTTGTTCTTTGGCATGTGGCATGTGCAAGAGGGGAAACACCAACACCAA
AAAGAAAACCAACTGACCCTTTGGTTTCAGAAGCGGGAAATTCCTGCCAA
ATATCAAGGAGAAGACAGTCACACTCCTGTTACAAAATCCCTTTATGCAG
ACTGGATGTACACGTACAAAGACAATTAACAAACTCAAAAAGTCAAACTA
CCTTGACGGTCCGCTTAGTACACACTGAAATGGAGGCGGTGGTTGCGGCC
ACAGGTCCAGTTTAAACAGCAGCAGGGAAATAAGACCCCCTCCTCCCTTG
GATACTGACATGGATTGGATACAGACTATGATTTTTTGGACACTGGACAT
GATATAAAGTAACTGGAACGACTATGAGCAGGATGCACTACTTACTTGCG
ATAATACTCATCAACAAGAGTGTGCGCAGTAACGGCAAGACAAGACAAGA
CAAGACAAGACAAATGCGGAGATGATGATGCAGTATTGTTTGGGCAATTT
ACACCATTTGTCACAATATATAGTAGTGTTGGTGGATATGTTCTGGAAAT
GCCCAACATATGATGACTTTTAAAAATAACTATGATATTGTGAATCGGAT
TGTTTTTGGTACACTGCCTTTTATTGTTAGGAGGTAGTAGCGAGTTACAG
AAATGTATACTTATTAGAACTTATCATCAGCGATTGTGATATTTGATCTT
CATCATTTCCGTGGACGAATAAGTACATTTTACTACAGAAGAACGAATTA
ATTTGACTTCCAATACTGTTTAGTACATTCAAATAAAAACTAAAATTAAT
GTCTGTTTGTGTATGATTATTTCTATGTCTGTGATTTTGTCG Coding sequence (CDS) from alignment at Sc0000049:765250..771841+ >BlTCONS00062029 ID=BlTCONS00062029|Name=BlTCONS00062029|organism=Branchiostoma lanceolatum|type=CDS|length=873bp|location=Sequence derived from alignment at Sc0000049:765250..771841+ (Branchiostoma lanceolatum)
ATGTCGACTGGATTCTACCTGTTCCTGGCGGTTGCCGCCATCTTGTCTCA
ACATGTCCGAGCTGGCGACATCCTCGTCGCGACAATGACGTACGGCAGCC
CCTGGATGGACGTAGCGAAGATTGCCGAAGCCTTGGCTTCCCGAGGACAT
GTCGTCACTGTGTTGGCCCATGCAAGTCAGAAGAGCGACCTGATGCGGAA
ATGGCCGACCCTGCAGTACGAAACATTCGGAGATCCAGAAGAGACACCGT
TGATTAAGGAACTCCTAAAAACTGTGCCGACAGCCTTGGCATTCCACACC
CCTGGGCTACTAGGTCACTTGTCAATTGCCTCTACTTTTGCTTCCGGACC
TGTGGATCATACCGAGAAGATGTTAGGTGACAAGAAGCTGATGGCGAAGC
TGAAGAACAGTCACTACGACGTTGTCTTGACGTACCCTGGACCCTCGGGT
GGGTTCTTCGTGGCGCAGTACTTGGATCTCCCTCTGGTCTGCACAATGCG
GTCCATGCCATCAGGACAAGACATCCGTGCCACTGGTGTCCCCAACCCTC
TTGCTTACGTGCCAACGGGGACATCGGGGTTGTCAGATCGGATGACATTT
ATGCAGCGGGTCATGAACGTGTTGCTTTACTTCACAACGACCACTGTGGG
ACAACTGGTCATGGAGAGGGGATTCGACAATGTTGCAAGAAGAACCATTG
GCGACAACTTCACCACGTCAGCTGCCCTTGCAAGAACCGACGTGTGGCTC
TACCAATCAGATCTCATGTTCGACTTCCCTAAACCCATGATGCCAAATAT
GGTCAGCATAGCAGGGCACATGGCTGAGGACGTCAAGCCGCTCAGTGAGG
TCAGTCAACAAAAGACTAGCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00062029-exon-Sc0000049-1564993656:765250..765433 | BlTCONS00062029-exon-Sc0000049-1564993656:765250..765433 | Branchiostoma lanceolatum | exon |
| BlTCONS00062029-exon-Sc0000049-1564993656:765917..766045 | BlTCONS00062029-exon-Sc0000049-1564993656:765917..766045 | Branchiostoma lanceolatum | exon |
| BlTCONS00062029-exon-Sc0000049-1564993656:766400..766712 | BlTCONS00062029-exon-Sc0000049-1564993656:766400..766712 | Branchiostoma lanceolatum | exon |
| BlTCONS00062029-exon-Sc0000049-1564993656:766994..767225 | BlTCONS00062029-exon-Sc0000049-1564993656:766994..767225 | Branchiostoma lanceolatum | exon |
| BlTCONS00062029-exon-Sc0000049-1564993656:769006..769177 | BlTCONS00062029-exon-Sc0000049-1564993656:769006..769177 | Branchiostoma lanceolatum | exon |
| BlTCONS00062029-exon-Sc0000049-1564993656:769603..770627 | BlTCONS00062029-exon-Sc0000049-1564993656:769603..770627 | Branchiostoma lanceolatum | exon |
| BlTCONS00062029-exon-Sc0000049-1564993656:770780..771841 | BlTCONS00062029-exon-Sc0000049-1564993656:770780..771841 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000049 | genome | Sc0000049:765250..771841 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF030584 |
|
