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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000049:497484..501957+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00061988 ID=BlTCONS00061988|Name=BlTCONS00061988|organism=Branchiostoma lanceolatum|type=mRNA|length=4474bp|location=Sequence derived from alignment at Sc0000049:497484..501957+ (Branchiostoma lanceolatum)
GTAAGCTGGAACGTATCCATGGCTGCTCAGCAAGGTTCTACACGCGATCA
AAATTCAGTGGTTCCAAGAAAGACCCAACAAACGACCGCCCTGTCAAAAC
GACGGCCAAGGTTACGGCCACAGTCCCTCGCACAGCTGCGGCCGCTGGAA
ATGACTCCCGCCGCCGCTGGTTGTGTCACTGAGACCTTCTGCTGGGGATC
ACGACTACTATCTTACGTCCGGTGCACTCTGCCTCTCGGGAACTGCTGTG
TAAAGTGACCCGCGGGGTTCTGAATTTCTGGTTCTTGTCAGAGAGGGTCC
TGATCAGAACCACATGTGGAGGATGTGTTCCGTCCCGTTGCCAAGGCGCC
CCGGAGCGAGGACGGCGAGCCGGGGCGGGGATTATGCGAGAGGCATTCAG
CCCCAGACGGACGGCATCGGTCACTGTCAATACCAGAAAGGGGAGGGGCA
TCTGTCAATGTCAACATCAGGAGGGGTGCATACCTGTCATTATCAGAAGG
NCATCTGTCACCGTCAACTCCAGAAAAGGGGGGGGGGGGCATCTGTCAAT
GTCAACATCAGGAGGGGTGCATACCTGTCATTATCAGAAGGGATGCATAA
CCTATGTGTGCAGAGATTTTGTTTTAGAGTAGATTTTTCGGTATACGTCT
GTTTTTTTGTTTGTTTGTTTGTTTGTTTGCTTGTGTATACGTTATCTCAA
TATTATATAGATGAAGAGAATGGCGGGTTTCCGCGTTTTGGTTGATACAG
GGTCATCTCTCGGCCAATCAGACGTGTTCTTATCTAATGAGCTGTCCAAT
TACAGTACACTTTCGAGAAGACAATCTTGGTCCCGTTTTAGTCGTCAATT
TCCCGGACGGACCTGTTCAGGGGTGTCTGCAACATTCCAACATATTTTTG
CGTACCGTACAACGGTAGGTATTTATTACTTATGTTTACTGATTTCTTGA
ATTATGATTTTGATGATGTTTGATGATGGTAACTGTGAGACTTCTAGAAT
ACTAGTAGTCCTTGTGAAGCGACGTTATCTATATGCAATATTGGCATGTC
GCATGTTGGTATTGTGCGAACGCGGCGTTTTGGAACTGTTAACCTTAGGT
TTACCGTCTCAGACAAACCATGGCGCACTTTTCTTCTGAAAGACATATGC
AAGGACAGCAAGGTACAATTGTGAAAAAGGCCTGTGCCCATCGTCGGATC
GCAACGCGTTGAGTACGTCACCTCAAAATATACTAGTAACCTATCGCACT
GTCCCTAAAGCTCAACTGGTAGCATCCTCATAGTTGAGCTACTGGTTCCA
ATTAGTTGGTAACTGGGAGACCCTGGTTCAAATGCTGGGAAGACATCTCG
ATTGGGGCTGTATATGTCTTTCGGAAGGGACTAACGTTCAACAAGAACAC
ATGACTACAACGGTAAATTACATTAGACAGGAGCAGACAACGACAGGACC
CGGCACTATGAGACAGGAGAAGACAAAGACAGGAGAAGGCAATTGCAACG
ACAACCTCGAACTGTTGACTTTGATGGGGCTGAGGGGTGTTTTCATTGTG
CTGTGACAGTTTCAACATTCTTGAGTGATTACTTGAAGAAATGTCCTGAC
TAGATTTGATAATTTTTTCAAAATTCTCTTTTGTCATTTACCAGAACTAT
GGCGACTCAGCTGACGACAGAGAATATCGTCCAGTTTCAAGAAATCTTCA
ACGCCATCGCCGACGAAAATGGCGTCATCGGTCCGAAAGAGCTCCGCGTC
TGGATTCAATCCATGGGGCAAGACCCGACCGACGAAGACGTGAAGGTAAG
ACTATGACGTTGATGAAGGTTAGAACTTAGACATAAGATACGCCAAAAAT
AGTTACTAAAGCAACTGGATAACATTTTGAAACAGTCAGACAACATCCGC
TAGCTTTCGTAAGACTAAGACGTCTAAAGTTGTTGTATATACCTATCAAC
GGCTCGGAAACTTGTCCGCTGCCTTCCTTGCCAGCGAAGTGTCTTGTGGA
AATGGGACAACAAACGTGAAAATGATCTCGAACATGTTTAACTCACTGAA
GAGCTATTCTTCCACTGGTCTTGACAGAGAAGACACACACTATGTACAGT
ACCATGTTCACAGGTTCCTTGTGCCAAATAAATTCCCATACTGTCTGTAG
GTTTTCTAATCTTCGAGGTCTATGTTAAAAGAAAAACGAACTTTCAAGTG
TTAACGAAGTTTAATTAATCATTCAGTGAACTTGTATTCGTATGATCTTT
TCCAGGGATTGATAGCCGATGCTGACTTAGACAATAGCGGGAGTATAAAG
TTTTACGAGTTTCTTGTTTTGATGGACCAAATCATGACGTTTCACAGAGA
GGCTCGTCTACGCAAGATATTCCAAGAGTTGGATCGGGTAAGACGTCCTT
TGTTTATTTTTTTTTTATTTTTTTATTTTTTATTTATTTTATAGCTTGCC
GCTACTCTTACCTGTCAAACGAGCCAGGATTCTTGTTAGCTTTAGTCTAC
TTGCAACAGTCGCTACCCCGCTAACAACGCGACCGTTGGAAGCGGACTAA
AGAGACTGGACTATAATCAAACCTTTTGGGTAAAGGTCCCTGTGCCTTCG
TAATGTCAACAAAGTTGTTGTTGCATCAAACCTAGGATGAGGACGACTAC
ATCATCGCTGCCGACCTGACATGCTGGATGACATGGCTGACAAGACAAGA
AGCAGAGGAGATGATCCAAGAGGCAGATCGCGATAAAGATGGCAAGGTGA
GATCACCTACATGTAGATCAGGGATCACGGCCCTCCTTTACATGGGATTC
TAGTTTGATCACACCTCGAGTACCATTACCATTCCACTGTATCATGCATT
CATGGAACGTTCTTTACAATCCATCAAGTAATAAATTTACAACCCTACCC
TTGCCTGTACCATAACGTTAATTTGTATAGCCATTTCCTCAAGCTCTCTC
TCTATATTGTCACAGTATCTTACCTTTGTCCTCAACGATGTAGTGGAAAC
CCAATGTGTACATTCAATGTTTAGAGTTTGCTTTATTGGATAGCAAAGTT
CTTTGTACACAGCCAAGTGTTTTATTCAAGCTTATGTTTGGGTGGCTGTC
TCTCACCTTCCTCAGGGCACTATTGACTGGTTGTATTTCGCACTGCAGTT
AGGTGTCGCTGCTAACAGGTGCAGTCCCCAACGTATACGCGTAAAGCATG
TTCACATATACATAGATAGGTAGTTCATTCGGTGTTTACAATGCGAAACA
AAACCAGCCAGTATTGCCCCGAGGAAGGCGACAGGCGGTGACTAAATTGT
CGGTTAAATAAAAAAACACGGGGTTGTATACAGAAAACTTTGTTATGCAG
CGACTTACCAACCTGATGAAACTATTCACGGCGCGGAGTTTGCCTTATCG
TATTGAGACCATTTATAACTATTGCAGCTTACGAAATATAACAACTGATG
TACAACCACTGACTTTGATTCTATGTCTTCCTCTATCTATAGGTGAGCTA
CCCAGAGTTTCAGAAGGTTATGGGTCCAGCTTGAGCGGACGACTGCCCCC
CCCCCCCCAATACATCTGCTTGGAGATCTCCCAATGAAGTTCTTGTGTGT
CGATGATTGAATCATTTTGAGTGGTTGAATCTGCACTGTCTTCGTATTAG
GGTATCGTTTCCTCCTGCCGTGCGCCTGTCGACCCTCCTCGGGGCAAAAA
TGACCGGTTCTGTTTCGCGCCGCAGCTAGGTGGCGCTGCTAGCAGATGCG
GTCCCAAACCTAAAACAAACGTAAACACGGTATTTGGAATACATAATGTA
CAAGTAGTTTATTCTAAGAAATACATTTGACATTTTAGTTGCTGTCCCAG
AAAATAGATATTTTTATCAATGCAGCACAAACATTCATTGACAATGGGGT
CGTGTGGCGTAACGGAATATTCGACTCAGAACCATGTGGTTCTGGGTTCG
AATCCTGTCATGTCATCAATTTTGTGCCCTTGGGAAAGGCACTTTCCTCA
CTTCACACTTCAAATGAGTATCTACCTTCGGTTAGGGACGTCCCTCGGAT
AGGACGTTAAACGGAGGTCCATCGTTTGGGCAGAGTCACACCCCACTCAC
GTTAAAGAACCCACCACATCTATTCGAAAAAGAGTAGGGGCATCCCCGGG
TGTGCGATTGTCCAACTCCTTCGAGTTGTATCAGCCGACGAAACTTTGTA
TGTCACCCCGTAAGGGGCGGTGTAACCGGTGAAGTTGCGTAAGCACGTAG
ACTGATAATGATGATGAACATTCAAATGTATATAATATGCAACTGTTCAT
CACTAGTGACAATTGCAATGTTTGTTTTGCTTTAACTATAATGAAAATGA
AGCAGTTGTAACACCTAGCACTCATGACATGTATCAAATAAATGTATGAG
GGAATGATAAATGGTTTATTGTGAGTTCCTACAATTGCACAGCCTAATAG
CTAATCGTATTGATGTAATAATAT Coding sequence (CDS) from alignment at Sc0000049:497484..501957+ >BlTCONS00061988 ID=BlTCONS00061988|Name=BlTCONS00061988|organism=Branchiostoma lanceolatum|type=CDS|length=564bp|location=Sequence derived from alignment at Sc0000049:497484..501957+ (Branchiostoma lanceolatum)
ATGAGCTGTCCAATTACAGTACACTTTCGAGAAGACAATCTTGGTCCCGT
TTTAGTCGTCAATTTCCCGGACGGACCTGTTCAGGGGTGTCTGCAACATT
CCAACATATTTTTGCGTACCGTACAACGAACTATGGCGACTCAGCTGACG
ACAGAGAATATCGTCCAGTTTCAAGAAATCTTCAACGCCATCGCCGACGA
AAATGGCGTCATCGGTCCGAAAGAGCTCCGCGTCTGGATTCAATCCATGG
GGCAAGACCCGACCGACGAAGACGTGAAGGGATTGATAGCCGATGCTGAC
TTAGACAATAGCGGGAGTATAAAGTTTTACGAGTTTCTTGTTTTGATGGA
CCAAATCATGACGTTTCACAGAGAGGCTCGTCTACGCAAGATATTCCAAG
AGTTGGATCGGGATGAGGACGACTACATCATCGCTGCCGACCTGACATGC
TGGATGACATGGCTGACAAGACAAGAAGCAGAGGAGATGATCCAAGAGGC
AGATCGCGATAAAGATGGCAAGGTGAGCTACCCAGAGTTTCAGAAGGTTA
TGGGTCCAGCTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00061988-exon-Sc0000049-1564993656:497484..497898 | BlTCONS00061988-exon-Sc0000049-1564993656:497484..497898 | Branchiostoma lanceolatum | exon |
| BlTCONS00061988-exon-Sc0000049-1564993656:497986..498397 | BlTCONS00061988-exon-Sc0000049-1564993656:497986..498397 | Branchiostoma lanceolatum | exon |
| BlTCONS00061988-exon-Sc0000049-1564993656:499128..499278 | BlTCONS00061988-exon-Sc0000049-1564993656:499128..499278 | Branchiostoma lanceolatum | exon |
| BlTCONS00061988-exon-Sc0000049-1564993656:499739..499870 | BlTCONS00061988-exon-Sc0000049-1564993656:499739..499870 | Branchiostoma lanceolatum | exon |
| BlTCONS00061988-exon-Sc0000049-1564993656:500119..500229 | BlTCONS00061988-exon-Sc0000049-1564993656:500119..500229 | Branchiostoma lanceolatum | exon |
| BlTCONS00061988-exon-Sc0000049-1564993656:500976..501957 | BlTCONS00061988-exon-Sc0000049-1564993656:500976..501957 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000049 | genome | Sc0000049:497484..501957 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF030572 |
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