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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000049:467270..474013+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00061984 ID=BlTCONS00061984|Name=BlTCONS00061984|organism=Branchiostoma lanceolatum|type=mRNA|length=6744bp|location=Sequence derived from alignment at Sc0000049:467270..474013+ (Branchiostoma lanceolatum)
CAGAATTTACAGTTGTTTACCACACACTCTATTCATCGTTGGCGAAAGCA
TCGACCCTGAATATGCGGAACGAGAACCGAACAACCATCTTTCCAAGACG
AAAACATGTTTTTCTACAAATGGATACCCTATTCAACATACAGGAAGCCT
TCCTGGTATTTAGATACCGTAAAGAGCCGTGGGACCTTATATAGACAATT
GTCTGTCTGTCAGCTGAGCAGTGCACATGCAGCGTGCAGTGTCACGGGGA
GAATTTCAACAACGATGTTTCTCTTTGAGACAGCTATGATTTCCTTGTGC
TGTTTGTCAGGTATGTACATTTTGATGTCTCTAACTTTGTTTTGAGAGTT
ACTCGTATGATTTTGTTGCTCTAAGTGTATCTTGTGCAAGATTGATTTGC
TATGTTACGGCGAACATTGTAGCATAAAGAACGCTATGCATTTATTTGTA
TTTATAATTTCTTATTGAATAAACCTGTAAAGGAAAGAAAAGGGACACCG
TGTAACTGAAAAAGCGTAACTTATATCTCACAATCATTGCTTGTACACAA
TTGTCAAAGATATAAAGATCTTGTTGGCAAAGCAACTTACGATAGCAACT
GACTTTGAAGGATTTTGGTGGGGGTACTAAAGAGATATATGGCGTTGGCG
AGGAAGGCAAAAGAAGGACGTAAAAAGTGGTTAATCTGACGAAAAAGGGC
TATATATCCCTTGTGCAAATGCCGTGTGGGTAGGGTAGATGTATTGATAT
AGTCCCAAAGCTTTTTGAGGCCGTAGGTGTAGTGGGTTGTTAGTTGGTTT
TAGGGCACGGCATTGGCAGTCGGAGCCCATCCCTTTCCTTCTCTTATATC
ATACCTCCCTAGCCAAAGTCAGGTACCCATTTTTACACCTAGCTGGGTGA
AGAGAGGAAAGTCAGGAATGCAAGGATTTGAACCCATGACCTCTGGATCT
CGTGTCCACTAGCCTGCCGTTCGAACATTTGACGCCACAATGCCGCATGG
AGAATGAATATCGCCTTTCGTTCTCAGAAATTTGAGATGGTTCCTCTTTC
CGTCTATGTTATGATCAAATCCCACCAGCCGATAAGCGTGTTTATGTAAC
AATGTTTTGCTTCCGATAATGCCTCCAAGCGTGTAAAACCAAATTTTACA
ACAACACTTCCAAACACTGACGAAAGCATTCATGAAATCTTAGTTCCTAA
AAAAAAGAAGCTCAACAATTTATATGTAACATACGGGGTTCCGCCGATTT
ATAAAACGTTTAGATGGATTGTGACTATTGAGGTGCCAGGATTACCAAGT
ATAAAACTACATACATATTTATACCTAGGAATATATATTCATTGGCGATT
CTTTAAATAGGCAGTTATGCGACCTGAGCTTTTAGTATTTTTATGGTCAC
GCTGTCTTTGTCATTAGGTCCCCTGCTATACGTATTTGTTATTCAATCAC
CGCTTCCTCATTTGCTCGACAAAGTGCGTAAAGAGGATCTTTGACTTCCA
AAAGCCAAGTTTCACTTCCCTGATTTCTGTAAATTCATTCATCTCTTTCA
TCAGCCGTTGCTTACTCAAATGAGGACTTCATCTTGGCCGCCGACACCCA
AATGAACAGCATGTACCAAGTAAACGTCACTTCCGGACAAAAGACGGCAC
TTCCGCTCGGCAACATATCACGTCCGTTTGCCCTGGATTACGACTACAAG
AACGACTACATTTACTGGACTGGGGATGGCAAAATACTGCAGTCACACAG
GAATGGGACAGGCAGGCGGGAACTGCTAAACAGCAACATCACAGGTAGGA
GCACTTAGGGCTTAACCCAGTACAAAGTCAACAGTCTCCTTGGTGCTGAA
ATGCCATCTCTTGCAAGTTTTTTCCTAAAAGTAGGCTGTTTCTTCAGTTA
ACTGCTCTCCATGAATATTGCAACACCACAATTCATAACAGGTTCCATTG
TGTTGACATTTGAAGCTGCTGAGCATGATGAGAAATTATGATAATCATAA
AAGCACTTGAAAAAATGTATACATGTATTTATATCAGGGTAGAAATTGCA
ATCTGGCAGAATCGCTGATTCTGCCGACAGAGATCCCGATTGGAACCTGT
GAATTTATGGATATTTCAAAGACATTCAGAACATTTCAACTTCATCACTT
TAGATCAATGTATTGACTTGAAATCTAGGATCTACAGATGAAAACACATC
CTTAGGATTCAAATTGGAGTTTATGCTGACAGAGAATCCGATCGGGACCT
CTACGGGTAGAATCGTCAATCTGCCAGATCGCAATTTCTATCTTTACATT
CAGACATTCTGTCTTACATTTCCAAAGCTGAAGGCCTTGCCCTTGACCTT
GCTGGCCATAACATCTTCTGGACTGACGTTGGAAAAAAGACCATCTCAGC
AGCGCGGATAGACGGGAGCTACCAGAGAACCCTCATCTCGGACAACCTGG
ACCGACCCCGAGCTATCGTCCTACAGCCTTCAAACGGGTAAACCTAGTTT
TCACTCATTATGAATCTATGTATGAGCAATGATGAGGACGTTAGTTGGTT
GCAACCATCACAAAAAAGGACATTACCCTTGCAAAGTATGGAAACTTCTA
TTACTCAAAAATTTCAGAAAACTAAACTTCTCTATCACAATCTATGTGTT
TCGGGTCGTGTGGCGCAACGGCAGAGCGTTCGACTCAGAACCAAGTGGTT
TCGGGTTCGAATCCTTTCATGATACCGATCTTGTGCCCTTGGGAAAGGCA
CTTTACACGACTTTTCTTACTCCACCCAGGTGTAAATGGGTACCTGACTT
CGGTCGGGGAAGGTCGTATTGAGGTCACCTGGTGGCGCCGAATGGCAGCC
GCCCAGACCCTTGCGACAGTTCCACAAAATGCAAATGTGGATAAAATATG
TATATGTTGTATACTATGTAAAACCTGTAAACCCTGCATCAAGTCAGCAC
TACTAGAAAGGCTGCCATTACGGGTAATATCTGACCAATAAAAAACCATT
ACATGTAGCATAGAATGGGACGACGTCGTACTTTGATGGAATGTATAACA
CATAAGCAATTTTGATATATTGTATTGTATTTACAATACTAGTATATCAC
TGCCATGTTGTGTTGCAGGTCCATGTACTGGACAGATTGCGGTCACGAAC
CCAAGATAGAACGAGCTGCCATGGACGGCAGCGACAGGACAACACTCATC
AACACGCACCTGGGCAAACCCACCGGTCTGGCAATCGACGTCAGGGGTAA
GTTCCGTAATTTGATACAATTTAGCGAACCTTAATGTTAGCTAACAAGTT
AGCATACATTTACGATTTCTGTTTATGATGAAAATAAGAAATCGAAGATA
TCATACCTCCGTAAAATATATTGATTCTTTTTAATTTTTCGACAATTCTG
TCTATGTACATGTATATACCTGCCTATGCAAATTGGGACATGGTCCAAGC
CAACCTTCCCATCCTGCCAGTCTCCGGTTACACCATCTTCCGCCTCACAT
CCTGTCACTCTACAATATTCAACTAACTGCAAACACGCACTAGGACACAT
GAACGCACAGCCTGAATGCAATACCTCCGTTTTCACGGAGGTAAAATACA
CTTTAAGTGGTGTTCCACATTTTCTGATTCATGCTAAACTACTGGATGAT
GTTACTGACGAATTTATGAACTGCAATCAATACTAATAGCAGAAAAAAAT
ATCCATATAGTTTTAGGAAGATTCGCTTTCTTTGAACACTAGAAAACGCG
TTGTATTGGTGTGATGGCGGAGACTTACACCACAGTCTGGAGAGATCGGA
TCTTCTCGGCAATAATCGTCGGGTCGTCGTTTCGTACCCAAACACGCAAT
TTCTCGGCATTGCAGTCGACGATGGTAACATTTACTGGACGGCGAAGGAT
GTGATTAAGTTCGCTAGGTGAGTGATATGTTTCCTGCTAGTCAAAATAAA
ACACATACAAGTACAAACTTGCATCTTCCGTTAAAAATGACAAAATAACG
TAACGTTAGATTAAACCTCTGACTAAGAAGCCCCTTTCTGAAATGATAAT
AATAATAATAATCCATGGCCGGGCATCAGAAATTTTACTATTTCTTATCA
ACTTTTTAAAAGATATGGATTAAAATGGCAGATAAGTTTAACCTTTCTTG
CCGTTCTGTTCTCAATAGAACATCAGAGGCGAACACGGGTCTTCGCCTTG
CCATAGGGAGTAGGTACGGTGAACTGAACGGTGTCCATCAACACAAAGAT
GGCGTCGTCACTGATGTCACCAACGGTACTTGTTCTGTCTTATTATCTTA
CGTCGTAATTAAGAAGCGCATATTAGAGAAGACCGATGTGAACAATAAAA
CAATAGACTATTGTTCTGTCATTGGCATGTCAGCACAGTCTATTTTGGTA
GAAAGCATGACTCATAGCATGATATATTTAATATGCATATATGCATCATT
ATCAAAACTAATCGAATCACACCTAATACGTGACCTGACGGTAACCGGAC
GTCAGCAGTGAATGTAAGGTACCCATACGTCTGTATCGTCCCCCGCCTCG
GCTGACTGGCAACATGCATTTTTTTTAAACTTGGTGGTAGACTGGTATGC
ACTTATACCATGCTATTATGTATACTGTCTTCTAGTCGAAGAACAACTAC
GGTGCTAAGAATTGCATCATGTCCATATCACAGCTTGTTCTTCCTACAAT
GGCGGGTGCCACCATCTGTGTTTGGCTCTTCCCGGAGGGAGGACGTGTGC
TTGTCGTGACGGCTGGATCCTCCAGGATGATGAATCTACCTGCACTCCTC
CCGGTGAGTGTAACGCCAGAAAACTTCAGTCTGATTTTAAATCAGAAGAA
CTTTCAAAAATCATTCTTTCATGATCGAATCATTATCATTGATCATTATT
TAGGGTATGTAAAACAGCATGTTTCCAGAGACGTGCAAACTAACGTTACA
GTATATTTAAAGATTGCATTTTATAGTTGTCACTAATAGAGACAATCTAG
CTACATTTTTATACCTTGTCCTATTTCTCTTGCTCGCAGATGTCCGTCTT
GTTGGTGGAAGTAGCCACAACGAGGGGAGGGTAGAAATTCGTCTCAACCG
CGGCGAATGGAGGACAGTCTGCGATGACAACTGGAACATCAACAACGCAC
GCGTAGTGTGTCGTCAGATGGGGTACCCAGATGCAGAGGAGGCAAAGATT
GCGGCCTATTTTGGGCAGGGATCGGGTACCATCGGGCTGGACGATGTGGA
CTGTACCGGAAATGAAACTAGCTTATTTGAATGCGCACATAGGGGTTGGG
GTGTAAGTAACTGTGGGCACCAAGAGGACGCTGGCGTTATTTGCATGTTA
GGTACGTGAATTTCTATTTCTATACGTTTTGACCGTAAAGCAACTAACTA
AGTTAAGTCTGATACATAACAAATGCCGTCGTGTTTTCTTGTCTTAGATT
CTAATATTGAAACATTTCTCGCAATGTGTAATGGCTTCACCCGCGCCTTT
AATCCACCAACATGGCGGACAATGCATTACGTCATAGTCACGTGACTGTG
AATTTCTGTAGATGTTCGTCTGGTAGGAGGAGGCTCTGCGCACAAAGGGA
GAGTCGAAGTCCTTCACGGCGGAGTTTGGGGCACCGTTTGCGATCGCGGC
TGGGACAAGAGAGATGCCGACGTGGTCTGTCTTCAGCTCGGGTACCCGGA
AGCGGCGACGGCCAAAAGCGCGGCGGCGTTTGGGGAAGGTGCAGGGCCGA
TCTGGGTAGACGACGCGGCGTGCACTGGGTACGAGACCAGCCTGACCAAA
TGTGGACACGCAGGGTGGAACGCAAGCAACTGCGATCACAGTCAGGACGC
TGGTGTCGTCTGTCAGTTGCTAGGTAAGTTTGGCAGTTGCTAGGTAACGA
TTATGATTTATCAGTTGCTAGGTAACATTTGTCACTTGCTAGATAGCGCT
TTTCAATTGCTAGGCAATGTCTATGAGTTGCTAGATAACGTCTGTCAGTT
GCTAGGTAACGTCTATCAGTTACTATGTAATGTCTGTCAGTTGCTAGGTA
ACAACTGTCCGTTGCTAGTTAACGTCTATCAGTTTCTAGGTAACGTTATA
ACGTCTGTCAGTTGCTCGGTAACGTCAGTCAGTTGCTAGGTAACGTCTAT
CAGTTGCTAAAGTAATGTCTGTCAGTTGCTAGGTAACATCTGTCAGTTGC
TAAGTAACGTTTGTTAGTTGTTATATAACGTCTGTCAGTTGTTGATGTGA
TCTGTCTGTTGCTAGCCTAAGGGAAGGTGCTAGGGAATCTAAGGATAATC
TAAGAATCTATTTTGATCGCAATCAGTATGTATTGTAGAATTTAGATATC
TCTGTGCTCGTTTTAGTAGGAACAATTTTGTGCATCACTTTAATTTTCAT
AACTTCCTCGTTACAGCTGTGCGTCTCGTCGACGGGAATACTGCTAACGA
GGGTCGGGTAGAGGTGTTCTACCAGGGCAAATGGGGGAGCGTCTGCGACG
ACGGCTGGAACCTGAAGGCCGCCCGCGTCGTCTGCCGTCGCCTTGGTTAC
CCGGACGCAACTTCGGCGTTAGACGAGGCTTACTTCGGAGAGGGCTCGGG
GCCCATCTGGCTGGACGATCTGGTCTGCCAGGGCAACGAAAGCGGGCTGT
CGGAGTGCGGCCACAACGGGCTAGGTGTGGTGAACTGTGGGCACGACGAG
GATGCTGGAGTAATATGTGCGCCACCTAGCGATTTGACAACGGC Coding sequence (CDS) from alignment at Sc0000049:467270..474013+ >BlTCONS00061984 ID=BlTCONS00061984|Name=BlTCONS00061984|organism=Branchiostoma lanceolatum|type=CDS|length=2085bp|location=Sequence derived from alignment at Sc0000049:467270..474013+ (Branchiostoma lanceolatum)
ATGTTTTTCTACAAATGGATACCCTATTCAACATACAGGAAGCCTTCCTG
GTATTTAGATACCGTAAAGAGCCGTGGGACCTTATATAGACAATTGTCTG
TCTGTCAGCTGAGCAGTGCACATGCAGCGTGCAGTGTCACGGGGAGAATT
TCAACAACGATGTTTCTCTTTGAGACAGCTATGATTTCCTTGTGCTGTTT
GTCAGCCGTTGCTTACTCAAATGAGGACTTCATCTTGGCCGCCGACACCC
AAATGAACAGCATGTACCAAGTAAACGTCACTTCCGGACAAAAGACGGCA
CTTCCGCTCGGCAACATATCACGTCCGTTTGCCCTGGATTACGACTACAA
GAACGACTACATTTACTGGACTGGGGATGGCAAAATACTGCAGTCACACA
GGAATGGGACAGGCAGGCGGGAACTGCTAAACAGCAACATCACAGCTGAA
GGCCTTGCCCTTGACCTTGCTGGCCATAACATCTTCTGGACTGACGTTGG
AAAAAAGACCATCTCAGCAGCGCGGATAGACGGGAGCTACCAGAGAACCC
TCATCTCGGACAACCTGGACCGACCCCGAGCTATCGTCCTACAGCCTTCA
AACGGGTCCATGTACTGGACAGATTGCGGTCACGAACCCAAGATAGAACG
AGCTGCCATGGACGGCAGCGACAGGACAACACTCATCAACACGCACCTGG
GCAAACCCACCGGTCTGGCAATCGACGTCAGGGAAAACGCGTTGTATTGG
TGTGATGGCGGAGACTTACACCACAGTCTGGAGAGATCGGATCTTCTCGG
CAATAATCGTCGGGTCGTCGTTTCGTACCCAAACACGCAATTTCTCGGCA
TTGCAGTCGACGATGGTAACATTTACTGGACGGCGAAGGATGTGATTAAG
TTCGCTAGAACATCAGAGGCGAACACGGGTCTTCGCCTTGCCATAGGGAG
TAGGTACGGTGAACTGAACGGTGTCCATCAACACAAAGATGGCGTCGTCA
CTGATGTCACCAACGCTTGTTCTTCCTACAATGGCGGGTGCCACCATCTG
TGTTTGGCTCTTCCCGGAGGGAGGACGTGTGCTTGTCGTGACGGCTGGAT
CCTCCAGGATGATGAATCTACCTGCACTCCTCCCGATGTCCGTCTTGTTG
GTGGAAGTAGCCACAACGAGGGGAGGGTAGAAATTCGTCTCAACCGCGGC
GAATGGAGGACAGTCTGCGATGACAACTGGAACATCAACAACGCACGCGT
AGTGTGTCGTCAGATGGGGTACCCAGATGCAGAGGAGGCAAAGATTGCGG
CCTATTTTGGGCAGGGATCGGGTACCATCGGGCTGGACGATGTGGACTGT
ACCGGAAATGAAACTAGCTTATTTGAATGCGCACATAGGGGTTGGGGTGT
AAGTAACTGTGGGCACCAAGAGGACGCTGGCGTTATTTGCATGTTAGATG
TTCGTCTGGTAGGAGGAGGCTCTGCGCACAAAGGGAGAGTCGAAGTCCTT
CACGGCGGAGTTTGGGGCACCGTTTGCGATCGCGGCTGGGACAAGAGAGA
TGCCGACGTGGTCTGTCTTCAGCTCGGGTACCCGGAAGCGGCGACGGCCA
AAAGCGCGGCGGCGTTTGGGGAAGGTGCAGGGCCGATCTGGGTAGACGAC
GCGGCGTGCACTGGGTACGAGACCAGCCTGACCAAATGTGGACACGCAGG
GTGGAACGCAAGCAACTGCGATCACAGTCAGGACGCTGGTGTCGTCTGTC
AGTTGCTAGCTGTGCGTCTCGTCGACGGGAATACTGCTAACGAGGGTCGG
GTAGAGGTGTTCTACCAGGGCAAATGGGGGAGCGTCTGCGACGACGGCTG
GAACCTGAAGGCCGCCCGCGTCGTCTGCCGTCGCCTTGGTTACCCGGACG
CAACTTCGGCGTTAGACGAGGCTTACTTCGGAGAGGGCTCGGGGCCCATC
TGGCTGGACGATCTGGTCTGCCAGGGCAACGAAAGCGGGCTGTCGGAGTG
CGGCCACAACGGGCTAGGTGTGGTGAACTGTGGGCACGACGAGGATGCTG
GAGTAATATGTGCGCCACCTAGCGATTTGACAACG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00061984-exon-Sc0000049-1564993656:467270..467579 | BlTCONS00061984-exon-Sc0000049-1564993656:467270..467579 | Branchiostoma lanceolatum | exon |
| BlTCONS00061984-exon-Sc0000049-1564993656:468824..469063 | BlTCONS00061984-exon-Sc0000049-1564993656:468824..469063 | Branchiostoma lanceolatum | exon |
| BlTCONS00061984-exon-Sc0000049-1564993656:469597..469756 | BlTCONS00061984-exon-Sc0000049-1564993656:469597..469756 | Branchiostoma lanceolatum | exon |
| BlTCONS00061984-exon-Sc0000049-1564993656:470388..470515 | BlTCONS00061984-exon-Sc0000049-1564993656:470388..470515 | Branchiostoma lanceolatum | exon |
| BlTCONS00061984-exon-Sc0000049-1564993656:471012..471186 | BlTCONS00061984-exon-Sc0000049-1564993656:471012..471186 | Branchiostoma lanceolatum | exon |
| BlTCONS00061984-exon-Sc0000049-1564993656:471438..471544 | BlTCONS00061984-exon-Sc0000049-1564993656:471438..471544 | Branchiostoma lanceolatum | exon |
| BlTCONS00061984-exon-Sc0000049-1564993656:471953..472072 | BlTCONS00061984-exon-Sc0000049-1564993656:471953..472072 | Branchiostoma lanceolatum | exon |
| BlTCONS00061984-exon-Sc0000049-1564993656:472309..472620 | BlTCONS00061984-exon-Sc0000049-1564993656:472309..472620 | Branchiostoma lanceolatum | exon |
| BlTCONS00061984-exon-Sc0000049-1564993656:472831..473142 | BlTCONS00061984-exon-Sc0000049-1564993656:472831..473142 | Branchiostoma lanceolatum | exon |
| BlTCONS00061984-exon-Sc0000049-1564993656:473686..474013 | BlTCONS00061984-exon-Sc0000049-1564993656:473686..474013 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000049 | genome | Sc0000049:467270..474013 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF030570 |
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