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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000048:489494..497053- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00061666 ID=BlTCONS00061666|Name=BlTCONS00061666|organism=Branchiostoma lanceolatum|type=mRNA|length=7560bp|location=Sequence derived from alignment at Sc0000048:489494..497053- (Branchiostoma lanceolatum)
GATTGATCAGAAGAGAGAGAGGTTGTCTTCTACCCAACAGCAAATAACTA
TAACTTTGATCGCCCAGGTGAGTGGTAAGTTCATCATTTATCCTCAGCAG
TAACTCGGCATTAACGGCATAGTTAGCATATTGATAATAGACCACTACAT
ATAGAATTAGACAGCAAAAGAGCAGATAACGGACTGAAACTATCACAGGT
GACGATTAGATAAGAAAACATGCTTGATTTAAAACTTGGTATCTGTGTAA
CAGAAGCTGGAGAAATAGCGCATTGGGCCAAAGAGCTAAATCGAAGGCGA
GTGGAGAAATAAACTGTATTGAACATGGATAACGTCAGAGTAAGGGACGC
GGACAGGACAGTCATGTGAGTAGACAAAATCCTTGTGTGAACATTGATGG
GAAACATGGACAGGTGAGGCGGGCTAAACCATACGGAGGGGTGTCATGCG
TAGATATGGCTGGTGGGAAAACAACCAAACAACCAAATAAACAAACAAAC
AGAAACATATTTTTGGGGTTGACAAGTATGTTTCTTGGTCATTTGTCTAC
CGTAATGTTTGTTATTATGTATCAATCGTTTCAACGAATCCCTACTCCTC
ACAAAAACAGTATAGCTCAATCATAATTCACCTAACTCCTGTACCGTTAA
TCTATTTTCATGCAAGGTCAAGAAACGACAATGGGGATTGGCCAAGTCAT
GGTGATAGCGGCCGTCCTTGTAGCCGCTAAGGCTGCTGAAGGTGAGATCC
TTGAAAAGACTGAGTATCCTTAGAAAGTGTATCAAAATGACTACAACGTT
AGATACATTGTAGTTAAAATACTAACAATTTTCATACACGTCTCTGAATT
GCATTCCTTGAGAATCTTTTACTACAGACAGAACTTTCTTGATTTAGTAG
CATAAAAAGTAGGTATAAAGTGACTGGTCTACTGCCTCCATCATGAACTT
CCGTGTTCAAGTAAATGCATCAGATTTCATTATACACAGATAAGCACGTG
GGTTGTTATATAAAAGGCCTAACTAACGCTATGGTCACATCTCCAAAGCG
GGGCTAGGCCGGGCATGCAGTTTGTTGGAACGAAATAAAGCCCATAAAAC
ACGTAAATCGTAAAAAAAGATATTCATGAGCCTAGTTGGTGCATATTTCT
TAAATAATCACGTCGTTTCAGCTTACAGCCCGGCCGAGGCCCGGGTTAGA
ATGTAGTATAACCGTAAATAGTCTAAACTTCTCCCGTCTTCACAGCCCAA
AGTTGCGGCGGAACCTTTTCTGGTTCAGCCGGTGAGGTGACGTCACCCGG
GTACCCGGCCAGCTACGGAGCGAACCTCAGGTGCGAGTACGTCTTCACGG
CTGAACCTGGCCAGGTGACCCAGGTCGTCTTCGAGTCCTTCGCACTACAG
GAGAAAAGCGGATGGTGGCTGTTTAAAACATGCCGCGACTATGTCGAAGT
GTATGATGGGGACAACCAGATTGGTGAGTGTAGCACTTGTTGTTAGATTG
TTCGTTCTGCTATTTTACACGGGGGCATACCCACCGGACCTCATGATCAA
GTCACACACACACACACACACACACACACACACACACACACACACACACA
CACACACACACACACACCGCATGTGGACCCGCTTACGTACGCAATCACAG
TGTGCATTCGGAGTCATGTTTATCAAATTATTTAACAACCATCACGATTT
CCATTCTTCCACAGGCAAGTACTGCGGAGATGACAGCCCAGGCATCATCA
GCACCTCGTCTGAACTTCGGATCGTCTTCACCTCCGATGACAACACCGAA
GCACCAGGCTTCTTCGCTTCCTTCATACGCACGGGTCAGTCGTTCGTTCG
TTCGTTCAGACCCTTGTAGTGCCTAGTGCCACGTAGTTGCCTTGCTGTTT
CTGCAGCAGGGTAGAACGTTATTTTTACAGGGAGCGGTTGCTAGCCCTTC
TAATGTGCTCGAGGTACCTCCACAAACACTGGTTCCTTCCGAAAGAAAAT
CAAGTCCTTTCTCATCCATCTTGTGGTGCGATAGTCACTCAGATGTTTTC
CATTATTTCTATCTTTTGCATATTGTGTCCTTAGATCAATTTAAGTATCA
ATTTGGAAGTAACACATGTTTAGATTCACAGCAATCAACATTCTGTTACT
CTTCATTTTCAGCATGCGGAGGAATCTTTTCGGGTGACGTCGGTAAAGCG
TCCTCCCCGGACTACCCAGAAAACTACGCGAACAACCTGAACTGCGAGTA
CGTCTTTCCTGCCGACGGCCGAATGTTGACGATCAGCTTCGAGGAGTTCA
GCCTGGAAGGAAAAACTGGCTGGTTCTTCAACCGCAAATGCCGTGACTCC
ATCACCGTCTACGATGGCGACAGCAAGCTTGGTACGTCTACTTATTTTCT
TTCTAATTCCTTAATCATGCTCAAGTAGTCAGCATAGTCCGTCAATCTGT
CTGCCTGTCTGTCGGTCGGTCGGTCGGTAAGTCAGTCAGTCAGTCAGTCA
GTCAGTTAAGTCAGTCTACCCATCCATTTTTTATATATAGCAAGATATTC
ATATAAATGTGCAATTCCTTTGGTATCTTTTTTCAGGCGAGTACTGTGGA
GATGACAGACCGGAGACGATTGAAACTGTCTCCGATGTCCGGCTGGTCTT
CACCACAAACGAGGACAAAACAGATTACGGCTTCTTTGCTGTGTACACAC
GAACTGATGACGTCGTCATAACCCTCCCTCCTACTGACCCGCCACTGAAT
ACTGATGGCAAGTTCTCTATGTTCGTCCGTTCGTTTGTTCAGACCCTTGT
ACTGCCTATAGCTATACTGGCAGTTTCCTTGCTGTTTCAGTATAGCAGGG
TATAGTTTTACAGGGAGGGATGGCTAGCCCTTCCCCTTAAACGTGCTCCG
GCACCTCCTCTCCACGGTACCCCCATTTTACGTCCCTTCCGATAGTACAG
TACAGCCCCAACTGAGATGTCCTGACCCGGGGACTTGAACCGGGGTCTCT
CGGTTACCAACTGATTGGAAACAGGAGGTCAACTGTGAACCGCTATCAGT
TGAGTCGCAGGGACATCCCTCTCTATGAAGAGATACAAATTGCAAATCAA
CAATACACAAAAAATATTTTCATCACTTAATGTCCTGCTATAGAGCACTA
ATTTGTTTTAAATACAAGAGCATGGGGCTACGTGATCGAACAAAGAGGCC
AGTTTCCAATTTTCCCGAGTTTCCCAAAACTGAACAAAAACCTTTCTACC
AACAACACACCTTGGCGATTGAGTGATTGAGTACTTACTATACATGATAG
GAAATAACGAAATCATAATGCACAGGATCTGTTGAACAAAACAGGTTAAA
CTTCGACCAAGCCTAGGAGCATATAGTATATACCAGACACTATGAAGCCA
AGCCAATACATGTACTAAGTCTGCTTTACTGTGCCATGTATAGGCCCCAC
TACAGGCAGGTGTGGAATCTCCCCCAGTCAACCCCGGGACCTCCCCGGCC
AGAACCGCATTGTCAATGGACAAGAGGCCATTCCCCACTCCTGGCCCTGG
CAGATATCCCTACAGGTACGACCTTAACGAGTGAAAACGGAGATATTGTT
TTTGGTCTGTTTGTTTGGTTGTCTTGGTGTGTATTTGTTCCCGCTTGCCC
GGGTCCAAGTTTGTTATCGGGCCGAGTTGTAACCGGAGACTGGCAGGATG
CGAAGGTTGAGCTGGCCTGTGTCCGCAGAAGTGAACGATAGTAAGTCAGG
AACCCAAGGATGGCATGTGCTAGAGATTGGAGCATGTTATATGCGTTAAA
TGCACATATAGTTGTGTTACATTCTGTCACTAAATTTACCAAAAATCTTT
AAAAAACATATTTACGGAGGTATGGCATACATGGGTTGGTGTTTTTGTTT
TTAACACATAGCAGTTGTACCAAGAGGCGCTATGTAATATGTGTTTCGTA
TGTTATAACACGACTGTTTGTCACTCCGCACAGACTTCTGACGGTCGCCA
CTTCTGCGGAGGTTCTCTTGTGACAGAGAACTGGGTCATCACTGCAGCTC
ACTGTAAACCCAAGTAAGTTTTCTCTCATTTCCTGAACACCTTTCAGTTC
CAACTTCCAAGTCAAGATGAGCTTTGAAATACTAGTACCTTACCTTACAA
TCTCTGGTGTTCTAACCACATTTCACTTATTCGTACCCTCGCGAATTGTG
TCATCAAGATGGCAAGTTACTGAATAAAAAAAGACTCTTTGTACACAACC
AAGTGTTTTCTTAGACCGACGTTTTGTTTACCGTCGGTCGCCTTCCTCTG
GGCAATTCTGACTGGTTCACTTTCACTGCAGCTATAGGTGTCGTTGCTTA
CAGATGCTGTCCTAAATGTAAAGTATATACGTATATACGGACCGCATCTG
TATATCAACCAGTGACACCTATCGCTGCAGTGCAATGTAAACCAGTCAGA
ATTGCCCTGAGGAAGGTGACAGACGGTTACCGAAACGCCTGTTTAATAAA
ACACTTGGTTGTGTACAAGGAGTCTTTTTGTTAATTTACTTCATCGTTCC
GAATCCCTCAGCCCCAGTGCCCACCTTGTCGTCCTGGGGGAGCATGACAG
GGACAGTAACTCCGAGATCACCCAGCGCATTCGCATCGAGAAGAGCATCA
GTCATCCCATGTATGCTCCAGCTGACGCCACCCCAGACGCCCCTGTCTCA
GACACCACCCTAGACTACGACATCTGTCTGGTCAAGCTGGCCACTCCCGC
CCGGATCGGCGAAACGGTCAGCCCCGTCTGCCTGCCAGGCGCTACGGATT
CCTTCGGTCCCGGGGAGGACTGCTACGTCTCCGGCTGGGGAAGGACGAGC
GGATTCGGTGGGTAATGGTATTAGACATCACATACTAAGGTAACTCTTAA
TGTGCTTGACGTCAGCATCCGGGATGCACGAGATAAGTGATAACCTTCGC
CAAGAAGGATATGCTTTTCGCAGCGTTTGCATGTATGTATGTATGTATGT
TTGTTTGTATGTCATGTCCTATCGGTGAAATGGTTAGACTTCGGGTCCCC
TGGCGGCAACAGATCTAGAACTTCCGGTTCGAACAAGCTGTATATATGGT
CGCGAATTTTTGGTGGTAGTTTTTTGTAGTTAAGGACCCATCTATTCTGA
TGTTAATATGCTTGTTAAGGCCTGTTAAGGCCCCTATTTCAACAGGACGG
CGATCGCTGAGCGACAGCACTTGACTTCATAATTGTAGTAATGATGCAAG
ATATGGAAGTATGATTCAAAAGACAACTAAAAAAACACGCGAAACGTCAA
AAGAATCGTTCTTTTCTTTGAAATTCGTTCAGCAATTTATGAAATCTTTG
ATCGCTAAGCGGTCGCAGCGAGGTCTCAGTCTGTAGTGGAAAGGAGGCGT
ATTCAGTTGCATCTACGACGCCATCTGCGTAGAGGGTAACCGTAAAAAGC
CCCCCTCCCACTGGACCCGCGACGCGTTGGCGACCTCGCTGCGTCCTAGA
TTGAATTTCAAGTGATTTAGCCTTGACTTTACAATGGGAATATCATGCAA
AACGTACAAGCATGAGTAAAGAGACAACAAATCACACAAAGCGTGAAAAG
ATTCGTTTTTTATCGCTGAAATTCATTTAGCTGGGTGTCAAATTGCTCGG
TCGCAGCGAGGTCACCAACGTGTCGCGGGTCCAGTGAGTTGTGCGTGACT
TAGCCCCTTTTCTGTTGCCTAGGCTTCAGCACAGCCAGGAAGCTTCAGCA
GGCCCGGACCGAACTGCTGAGTACCCCCACCTGTAGGAACACCTGGGGAT
CCAGAATTACCGACCGTATGATCTGCGCAGGCGCAGACGGTACCAGCGCC
TGCCAGGCAAGTACAATTTGATTCTGTTTCTTCTCAACAGAAAGATTTTA
TTAGTATGGGAGTTCCTCTGAGTTGGCAAATTGCATCATGGAGGTTGGGA
GTAGGCTGGAATCCATTGAAATTGAATTGAATTCTAATCTACCTCCTCTT
ATAGCAATGATCTGATGAATATAACTTTTCCGACTTTGATTGTTCAAAAT
GTACATTCGACTGGTGCAGTCGACTTTTAAAAACTACTAGGCAACCACGC
CGACCAACCACAGATTGGCCTTTTAATCACGACTAGCTCCCAACCACAGC
CTGGAGAAGGCCGGGAGGCCATGGTAGGCTATGTGTTGTTGTTCACCTTG
TTGTGCCTAGTGGCACATATGTCAGCAAATTTCCTTGCTGTTTCTGCAGC
AGGATATATGTTTTAATTTTACAGGGAGGAGTTGCTAACCCTTCCCCTTT
AGCGTGCTCGAGCACCTCCTCGAACACGGGAACCCCATTTTATGTCCCTT
CCGAAAGACGGGTGCAACCCCAATTAAACCGAGGTACCCTGTCACAGGAT
TTGAACCGGCGTCTTGCAGTTACAAACAAAAAATGGAACCAGGAGCTCAA
CTGTGATGAACCGCTATCATGCAGTTGAGCCGCAGGGACATCCCACTCTA
TGAAGAGATACCGTACAAATCGAGAGTACACGAAAAATATTTTCACATAC
TTTCATCCACAAATGACCTTTTTTCACGACCATCTCCCAACCACGGCCTG
AAAAAGCTTGGTGAGGAGGCCATGGTCGGCTATGTGTGTCGGGGTTTTAA
CCGACTCTCCTACTCTGTTGTGTCCCCAGGGTGACTCCGGCGGCCCGCTG
GTGTGCCAGAGGGCCGGTGCGTGGCAGCTGGTGGGGGTGGTGTCATGGGG
TAGCGCCTTCTGCAGTACCTGGCGGCCCGCCGTGTTCGCCCGCGTCACCG
AACTCAGGGAGTGGCTGGACCAAAACATGGCGGAAAACAATTAGAACGGC
GTTCTTCCAACTTTTGCCGTATTCACAATAGGTCTAACTATCCACAACTC
TGAACGTATGTAAGGTAATGGGCAGGTCTGGTCCATCTTTATAATAATGA
TAAACGGCTTCTACCATCACCAATGCTGACAACTTCAAATTCTCACACAT
GTGTACAGTGTAACGTAAGTCCAAATGAAGGAGGGCATGAATACGCAAAT
GTTGAAGGAATGCCATTTTGGTCGAGGGTCCATTCGTCGAAAGCCCATGT
AGTCTTGAGTAAGAGTGTTGAGCACATCATACATGTACACGTCACTCAAA
TCGACCCAACTTTATGGTATGTTTTAACTCGCAGACACGTCGACACATTA
CAAAATCATTTCAGATTGAAGTATATTTTGATGTTTTAGCACAAAAAGTT
AGCATGCATTAATCTGAGGGTTTCTACGACCGTTTTTGCGACACTGTTAT
GTATCACTCGAACATGACTTAAAGAATGGATCCACATGTGTTGTTCTGGT
GTCTTGGTTTCCATACATACTTTAATCGACTCTTAAAACATACAATAGCA
GGTAGAATTTCTTAAGATAACGTGAGCCATCATTATGACAAAAATGATCC
ATTTACCAGAAAACAGATGAACACTATATTGTGGGTGGGCGTTGAAATGA
TTTTGATTGCTCTGAAACACAACCCGTGATTGATTATTCATGTTCTGCTT
TATCAAAAAG Coding sequence (CDS) from alignment at Sc0000048:489494..497053- >BlTCONS00061666 ID=BlTCONS00061666|Name=BlTCONS00061666|organism=Branchiostoma lanceolatum|type=CDS|length=1596bp|location=Sequence derived from alignment at Sc0000048:489494..497053- (Branchiostoma lanceolatum)
ATGGGGATTGGCCAAGTCATGGTGATAGCGGCCGTCCTTGTAGCCGCTAA
GGCTGCTGAAGCCCAAAGTTGCGGCGGAACCTTTTCTGGTTCAGCCGGTG
AGGTGACGTCACCCGGGTACCCGGCCAGCTACGGAGCGAACCTCAGGTGC
GAGTACGTCTTCACGGCTGAACCTGGCCAGGTGACCCAGGTCGTCTTCGA
GTCCTTCGCACTACAGGAGAAAAGCGGATGGTGGCTGTTTAAAACATGCC
GCGACTATGTCGAAGTGTATGATGGGGACAACCAGATTGGCAAGTACTGC
GGAGATGACAGCCCAGGCATCATCAGCACCTCGTCTGAACTTCGGATCGT
CTTCACCTCCGATGACAACACCGAAGCACCAGGCTTCTTCGCTTCCTTCA
TACGCACGGCATGCGGAGGAATCTTTTCGGGTGACGTCGGTAAAGCGTCC
TCCCCGGACTACCCAGAAAACTACGCGAACAACCTGAACTGCGAGTACGT
CTTTCCTGCCGACGGCCGAATGTTGACGATCAGCTTCGAGGAGTTCAGCC
TGGAAGGAAAAACTGGCTGGTTCTTCAACCGCAAATGCCGTGACTCCATC
ACCGTCTACGATGGCGACAGCAAGCTTGGCGAGTACTGTGGAGATGACAG
ACCGGAGACGATTGAAACTGTCTCCGATGTCCGGCTGGTCTTCACCACAA
ACGAGGACAAAACAGATTACGGCTTCTTTGCTGTGTACACACGAACTGAT
GACGTCGTCATAACCCTCCCTCCTACTGACCCGCCACTGAATACTGATGG
CCCCACTACAGGCAGGTGTGGAATCTCCCCCAGTCAACCCCGGGACCTCC
CCGGCCAGAACCGCATTGTCAATGGACAAGAGGCCATTCCCCACTCCTGG
CCCTGGCAGATATCCCTACAGACTTCTGACGGTCGCCACTTCTGCGGAGG
TTCTCTTGTGACAGAGAACTGGGTCATCACTGCAGCTCACTGTAAACCCA
ACCCCAGTGCCCACCTTGTCGTCCTGGGGGAGCATGACAGGGACAGTAAC
TCCGAGATCACCCAGCGCATTCGCATCGAGAAGAGCATCAGTCATCCCAT
GTATGCTCCAGCTGACGCCACCCCAGACGCCCCTGTCTCAGACACCACCC
TAGACTACGACATCTGTCTGGTCAAGCTGGCCACTCCCGCCCGGATCGGC
GAAACGGTCAGCCCCGTCTGCCTGCCAGGCGCTACGGATTCCTTCGGTCC
CGGGGAGGACTGCTACGTCTCCGGCTGGGGAAGGACGAGCGGATTCGGCT
TCAGCACAGCCAGGAAGCTTCAGCAGGCCCGGACCGAACTGCTGAGTACC
CCCACCTGTAGGAACACCTGGGGATCCAGAATTACCGACCGTATGATCTG
CGCAGGCGCAGACGGTACCAGCGCCTGCCAGGGTGACTCCGGCGGCCCGC
TGGTGTGCCAGAGGGCCGGTGCGTGGCAGCTGGTGGGGGTGGTGTCATGG
GGTAGCGCCTTCTGCAGTACCTGGCGGCCCGCCGTGTTCGCCCGCGTCAC
CGAACTCAGGGAGTGGCTGGACCAAAACATGGCGGAAAACAATTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00061666-exon-Sc0000048-1564993656:496987..497053 | BlTCONS00061666-exon-Sc0000048-1564993656:496987..497053 | Branchiostoma lanceolatum | exon |
| BlTCONS00061666-exon-Sc0000048-1564993656:496313..496387 | BlTCONS00061666-exon-Sc0000048-1564993656:496313..496387 | Branchiostoma lanceolatum | exon |
| BlTCONS00061666-exon-Sc0000048-1564993656:495581..495808 | BlTCONS00061666-exon-Sc0000048-1564993656:495581..495808 | Branchiostoma lanceolatum | exon |
| BlTCONS00061666-exon-Sc0000048-1564993656:495220..495339 | BlTCONS00061666-exon-Sc0000048-1564993656:495220..495339 | Branchiostoma lanceolatum | exon |
| BlTCONS00061666-exon-Sc0000048-1564993656:494673..494891 | BlTCONS00061666-exon-Sc0000048-1564993656:494673..494891 | Branchiostoma lanceolatum | exon |
| BlTCONS00061666-exon-Sc0000048-1564993656:494297..494467 | BlTCONS00061666-exon-Sc0000048-1564993656:494297..494467 | Branchiostoma lanceolatum | exon |
| BlTCONS00061666-exon-Sc0000048-1564993656:493489..493610 | BlTCONS00061666-exon-Sc0000048-1564993656:493489..493610 | Branchiostoma lanceolatum | exon |
| BlTCONS00061666-exon-Sc0000048-1564993656:492991..493070 | BlTCONS00061666-exon-Sc0000048-1564993656:492991..493070 | Branchiostoma lanceolatum | exon |
| BlTCONS00061666-exon-Sc0000048-1564993656:492197..492492 | BlTCONS00061666-exon-Sc0000048-1564993656:492197..492492 | Branchiostoma lanceolatum | exon |
| BlTCONS00061666-exon-Sc0000048-1564993656:491198..491331 | BlTCONS00061666-exon-Sc0000048-1564993656:491198..491331 | Branchiostoma lanceolatum | exon |
| BlTCONS00061666-exon-Sc0000048-1564993656:489494..490374 | BlTCONS00061666-exon-Sc0000048-1564993656:489494..490374 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000048 | genome | Sc0000048:489494..497053 - |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF030441 |
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