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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000048:478045..485459- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00061663 ID=BlTCONS00061663|Name=BlTCONS00061663|organism=Branchiostoma lanceolatum|type=mRNA|length=7415bp|location=Sequence derived from alignment at Sc0000048:478045..485459- (Branchiostoma lanceolatum)
CCTTGGTACAGACGATGAAGCGACTGAAGACGAATCGTAAATGGCCGTTA
TAGCAGGTACAATCTTGGAGATAGACACACTTACACAAGATGTTTATTTA
TCTATTTACACAAAATCTCGTATGTATAGGGACTACAATATATACATGTA
TATATCATAAATTGTGAATTATGGCATCATTTGTATTATCACTATTGTGA
TTATCCTCAATCTTCTTTATGGCATAAATGTTGAAGTTTATATATTCCTT
ATTGCTATGTAAACAGAACGATAATATTGTGTTTTGATTTTGACTAAAGT
GTTTGATGACAGATTATCGTCATGCAAAACTGTGTGTGTACATTTACTAC
ATGTGCAGAGTTTTGGCTTGTATGTACGAAACATAGTAGTTGGTATAGCG
CATTTTGTCTGCATGTAGATTGTGAAGGCTAATGAATATTTGCAAAGACG
TCTGACGTAATGTCTCAGTTTGTGGTGTGATTATTCATAAATATATCATG
ATTAATGATATCAATGATGGCGCATGTAACAACGTGCCACCAGTGTACGA
CGCAGACAATCTAAAACATGTTTCTAATCATAATAATAAACAGCCACATA
CCATGCCCTGAATATTAATGATATCAGCGTGTGCAAATAATGTCTTATTG
ACAGGAAGCACAGAGACTACATAGAAATCGGTAAACATCCAATTGAAGAA
TCAGTGCAATCGATACAGTCAGTGGGCAGAGTGATCAGCTGGCAAGCAGA
AGGTCGTGGGTTTTATTCCAAGTAGGACGTTCCTTTTTAACATCCACTCT
TTATCATTCATCAATTACTCTTGCTCCGGCATGTGAATAAGTATTATTTT
TGCAAAATTGTACAGGATTATCCTCGGGGTTAGGGTTAGGGTTAGGGTAG
GGTCCGTTTTTTCGGTTATTCAGAAGATTTTTAAAGGAACACGCTGTCAG
TATACGTAGTGACCAGAAAATTCTTAGACTTGGCCTAATACTAAAACCGT
CATCCTCAACTGGGGTGAAGCATAATGATTTTTTTCAAACAGCTAGTTGT
AGTGCAATGCGACTTCGCAACTTTTGTCGATGTACTTAATTGTTCCAAGG
AGAAAATTGCTTTATACACATGATACACCTTCCGGTGCTTCATGGTGTAA
GTTAGGAATCAGACAATAACGACGCCTATCAATAATACTACAAATTGCAA
TATCGTGGCCGCTTTAGAGGCGACAAACAACTATGTAAAGATAAATATAG
TTATAGCTAAGGACAGAAAGAACAGAAATTGAATACTATTACAGAAAAAT
TCATCTTTAAAAATGTTTGAACATATTTTGTGGCACTATTTCAACTCTAT
CTAGATTTCTTTCGTAGCAATATGTTACAACATTAGCTGTGAAGTTTTGT
CGCCCTCCTAAGGTTAGGGGTCAAGTCACCAGCACACCCGGAAGAGCACA
TGATAACCTCTTTCTTGACACAAACGTTTGCTGGAGGCGTAAATAATCGC
GGTATACGGTATACGTGCGTTGTGCCACGTCTGGTGAGATCTTACAAGAC
AGGTAGTAGTATACCGTATCATCAGACTGTCAGACATTCCGTCTTTAGAC
GCTGTAGTAACGTGTCCACTCCGACCAAGTACAAGGACTCAGAGATCATG
AGGGGTGCCCACCGTGTGCTTGCGGGCGTCCTCCGTCGCGGAACGCCGAG
CCTTGGGTCCAAGACTGTGGGCGGGTTTGTCCGCTACAGCTTCAAGTTCA
GCTCAAGTGCAGCAGTCAGCACCAAACCACACATACGGCCTGGATATGTC
ATCCTCGGTGAGTAGCTGTGAAGTTCAAAGGGAGTGGGTCGTGGGTTACA
GCTGATCGATTGTTATAACGGCAGTATGTTAACATAACGGCACGATTGAG
CAGAGTAGAGTTACATACTAGTATGTTAACATTACATGCCTTGATGCATT
ACCGAAAATTTCCGCGTATTGCAAAACGGTATCTGCATAATTTGAGAAAT
CGTCCCTCAGTGTAACATATGGTTTTGTCATCCAGCTCTGTGTTATATTT
GTGCACGCCTGCGAACTAAAGTGTTTCGAACCTTCTGGGTGAGAGCGTGC
CTGTAACAACAGCACGTACACCACGTATGATCCTAATCCCACGCCTGTCG
TTACCATGGTTACACTTCCCACAGTTCACAGTGAGGAAACTAGAAAGGCG
AGCAGAATCATGATCATGAAACATTTCCCTACAATGGACTATTCCATTTT
CATTGTGTGGCTGGGTGAAAGCTATTGAACTACCAGTTGTTATCTTTATT
ACTGCTTCCAATATTGTACAGAGGCAGGAGGTCATACTTTTTATTTGGTA
AAAATAGACAAAATCCCCTATCTGATGAGCAGAATAGATTCTTCTTGCCT
TTGTCATTATACAACAATTCATGAAAAGATACGTATACATTTTTTGGTAA
AAGTAGAAAAATATTCCCCGATGGCAATCAAATTAGACCATGATAGTATC
TTACCCTGTTGGCATAATATTCAATGGATCCTATAAAAATCCATGTGTTT
ACCAATTATCAGCTTGATTGCTTTCCGCACAATAACACAGAAGCAACAAA
TAAACATATACAGACGAAGCCACTTAATTGCACCTCGGATAAACGCACCT
TCCGTTTAATTGCACAGAATCTCAATATCCAAAACCGGTTCCCATTCACT
GCATTGTTAGTGACTCCGCATATCTGCACCGCGCATGGGCACCAATGCCG
GATAACTGCACCATTTTTTTTCAAAAATCCTCGACAAGTTAACTGAAAAG
GTGCGCTAAAATCGGCAAACGCGGTACAAATGAGCCGATACCTGCCGGTG
TAAAGGCGCAATACCGCCAATATGTTTNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNAAACTGTTTTGAGTAACAAAACAAGGCGGTCTCCATTGGCA
GTTACGTTGATAGGAATCGTATGGGAGGTCCCGGGTGGGTCACCCGTAAT
CAGTAACCAAGTTTTAGTTTCAATTCCTAGTTTCATGGCGGTACATGATT
TACGTAAATCGACAACTGCACTCTACGTAATGTAACACAGAAACTGTTAT
CCCATGAGTGGTATGACGATGTTTCAGAATGCCTGCCCTGTAACATTATG
TGTGTTGTAATGTGGTAGATCGCATGGAAAAATGAAAGAATGCAAAATCA
AAACAGGTTCGTAGTCATTTCTTTATTTTCAGCAAAGGGTCAATAAATAA
AGTTAATAACTGAATAATTTCGTCTGTTTTCTTTGTGCTAGTGTTTCTGA
CTAACAATACACCCCNCAACAATTCATGAAAAGATACGTATACATTTTTT
GGTAAAAGTAGAAAAATATTCCCCTATGGCAATCAAATTAGACCACGATA
GTATCTTACCCTGTTGGCATAATATTCAATGGATCCTATAAAAATCCATG
TGTTTACCAATTATCAGCTTGATTGCTTTCCGCACAATAACACAGAAGCA
ACAAATAAACATATATAAGTAAAATCATATCACTTTTAATCTCTTCCTTT
CATGACGCACTCCTCAGGTGCAGGACTGGCCTGTGGCGCCGGTGCCGTGC
TTTACTCAGCCCACCTGAGGAAGAAAACTCTCGCCGCCACTCTGGAACCC
GTCTTCATGGCACAGCCAATCACAGACATGGCTACCATACAGCAGGGGTC
AGACATGCGCAGTCGGATGGAGCTGCTCATCCTGCGCGTGCAGTCCGACG
TGTGTAAGGCTATCGAGGAGCTCGAATCTACCGAAGGTGACAAGAAGTTT
CTCATTGATCGGTGGGAGAGAAAGGAAGGCGGTGGGGGGATCAGCTGTGT
GTTACAGGACGGACAGGTGTTTGAGAAAGCCGGGGTCAACATCTCCATCG
TCCTGGGGAACCTTCCTCCCGCCGCTGTGCGACAGATGCGGGCCAGGGGT
AAAGAGTTCAAGACCAAGGACGACAGCGGCCTCCCGTTCTTTGCGGCGGG
CGTCAGCTCGGTCATCCACCCCCGCAGCCCCAACGTCCCCACCATCCACT
TCAACTACCGGTACTTCGAGGTGGTGGAGGAGGACGGCACGCGGCAGTGG
TGGTTTGGAGGGGGTACGGACCTGACACCGTCTTACCTGGACACAGAAGA
CGTCGTGCACTTCCACTCCACACTTAAGGATGCCTGTGACAAACACGACA
AGTCTCTGTATCCAAAGTAAGTATCTGATCAAACATGTTCTAATCAGTGC
CAACACTTAGCATGTTACGTTGAAGGATGAAATTATTCTTCTTCAGAGCA
AACTACTGGTCCTTAGTGAATGACAGACATAACAAAAGTTTGAAGATCTC
ATACCTCTGTGAAATATTGAGAATTCCTTGTATGTCTTGTTTAATCATAA
TTCATTGATTATGCAAATAAGGTTTTGACTAACATTACATGTATCCATTG
ACCATTTCCTGTCACTCTACAGTGAGCATGACTAACATGTATCTGCAAAA
CACAAACAATGAGACAAACAAGTCCTCCCCGTGAACTAGTAGGCGCTTCC
ATTGACCCCCTGACCTGGTGTGTCAGTTGTCACACAAGGTTGATGAGTTA
CTCACTTTCTGACACACTGAAAACCTGACCTATCGTTTCACAGAGGTGAT
AGTTACATGATGAATTTCATATACTTATAGTAGGGAACTTTCTCCTGTCT
CAAAATTAAGAAAAAGAAGGACACCATGTTCATATTCTATCCCTCCTGTC
AGGTTCAAAAAGTGGTGTGATGACTACTTCACCATACCCCACCGTGGGGA
GTGCAGAGGGGTCGGTGGGATCTTCTTCGATGACGTTGACGAACCATCGC
AGGAAGATGCATTCCGTTTCGTCCAGTCCTGTGCTGATGCAGTATTACCT
TCCTACGTGCCTATCGTGAAGAAGCAGATGACACGCGGGTATGGCCTCGC
GGAACGTCAATGGCAACTTCTGCGCCGTGGAAGGTTTGTTACTACTGTAT
GATGAAAGTGCCACCCTAGCCTTTGATGTTTAGATGAATGAATCACAGAT
AGTGCATGTACACTGTTGTATCTATGTCAATATTCACATGTAGTATATCT
TGTGTTATCGATTAGAAATATTTTTGCAATGATTTAGCATTTCGATATTG
ACTTTTATTTTCATATTTTCATAGGGACTAGATTTCATGGTAGAAGGGGT
AATGAGGTTTTTGCAGTGTATTAAGTTTGCATTTGAAACAGTTCTGTTGT
ACAACAGTAATGCATTGGAGATGCATATTCGCGGTGTCATGAATTTGCGG
GGAAAAGATCACACAAAAGCCGCACAAATAAAACTACCACAGACATTTGC
AGTACTTTGTTTCCTCAGTGCTAGTGATCCGCTGATGTGTAACACTTTCT
TTGCGTGGACTGCAGGTATGTGGAGTTCAACCTCGTGTATGACAGAGGCA
CGAAGTTCGGTCTGGCCACCCCAGGCGCCCGTATTGAGAGCATCCTGATG
TCGCTCCCCCTAGCAGCCCGGTGGGAGTACTGCCACGACCCCGCCCCGGG
GTCACCAGAGGCGAAGATGGTGGAAGTTCTCAAAAACCCCAGAGACTGGG
TGGAATCTCAGTAACAGCAATTCTTAAAAGTATCTACTTTTTCAATAAGG
AAATACCTCTACTTTTGTAATTCTTAAAGGGAGGCTAAACTAAGAATTAA
AAAGTGTACTATACCCCAAAGTCAAGTCCTCATTTGTTTCAAATTAGTTT
ATCATAGTTCAGGGCTCTCCCGTCATTTGTAATCCTAAAGACTGGGTGGA
ATGTCAGTAGTGGCAATTCTTAAAAGTTTCTACGTTTTCACTAAGTAAAT
ACCTCTACGTTTGTAATTTTTTTGTATTTCAAAGTTTAAAAAAGCAACAA
TATCTCCAAATAACCTTTTTTCAGTGTAATTCTAACTCAAGTATTGACAC
AGCATTCTCTAGCTACCTTCAAGAGATTGTCTGAGGGGAGTCGCATAATG
CTGCAAACAGCACACTTACAGTGTTTGGCTCTGAGCAACAATCTACATGT
GCCTCCTCAACTGCAAATGGCATTTCTTACAGATATGTATTGTAGAATTT
TGGTGCCAAAACTTCAAAAATTCTGAATTTAAAGATCTCCATTCAGATTG
ACATTTGCAACTAATTTCCAACATTTTTGTGCCATTTTGTCAGTTGACAA
ATCAAGCGGCATTGGAAAGTGTGCAAGACATTTATATGGTGTAGTCACAT
TCATACATGTGAATATTGCTGTGAAGTGTGATAAGCTTGATTCAACTTAT
GATTGACCAAAAGCAGTGACTTTGTTGTAATGTTTTGATCGGTCAGATTC
TACAATATGTACCTTTAAAGATAGATTCACCTGAAGTGCTTCTAAGGTCA
GAGTAAGACTTAATAGAGAGGCCAAGGTCTGTGAGGGAAAGACCTCACCA
AACAGCAAAATATGAACATGTCCTGGTGTGAAATGTAGATGGACCAAAAT
TCTTAGCTTGAGTCTTGCCCACAAAATTTTTCAAGTTACATGTACATGTT
TTTATGCTGCAAGATAGAGTACTGAATTAAAGTTTCATATGATACAGTAT
GTAGACCTTGTTAACATTTACTCAAGCTACTGGATATGATTTTAAAAACC
AGTTGCTTGAGTAACTTCTTTTTTGGCGTATCTTATTACCTGGATGTCTA
ACCTTTATCAAACCTTGTTAAAATTTGTTTCTGTATAGTTAGTGGGCTTG
TTTTACGTCCAGTAGATGTTTCTACATGTTGTTAGCAATATAATGTAATA
GTGATTGTAATGGGGCTACAACAGTGCAATGTCTATTTCCTTCTGAAATG
TTTACAATTTACTTAAGGACAACTTACTGGTGTAGGCCACAGGCCTCTTG
TCATTCATCATGTATGTGTTGCTACGTCAAACTAACCTACTGATGATTTT
CATACACTGTGAATATCGCAGTGCAGGGTGATAAGGTAGATTCGGCTTAT
GATGTAGGAAACTGACCTAAAACAGTGACTTTGTTTTGAGCTTTGATCGG
TCATGGTTACGCCACTACTCATGATTGTCAAATAGCTATATATAATCATA
CCATCTGATAGGTTGGTCAATGAGTCACGTAGTATCCCTTCTGTGTTTTT
TGTCTTGTGCAAAATAAGGTGACTCAATCACTCATCCATGTGTAAAGGGT
CTATATGCAGCAATAAAGATTTTAGTACCTGAAAGGACTTTGCACCTCTT
GTTACCTCCGTGAAGGAGGTTCGCCTCCTGTGGGGGTATTGCAGTAGTCT
GGATCTGTGTGTTCCCAGCTGTAACTCAAGATCTGTTTGATGCATTTGTT
TTCATTTTGGCATGT Coding sequence (CDS) from alignment at Sc0000048:478045..485459- >BlTCONS00061663 ID=BlTCONS00061663|Name=BlTCONS00061663|organism=Branchiostoma lanceolatum|type=CDS|length=1437bp|location=Sequence derived from alignment at Sc0000048:478045..485459- (Branchiostoma lanceolatum)
ATGATAACCTCTTTCTTGACACAAACGTTTGCTGGAGGCGTAAATAATCG
CGGTATACGGTATACGTGCGTTGTGCCACGTCTGGTGAGATCTTACAAGA
CAGGTAGTAGTATACCGTATCATCAGACTGTCAGACATTCCGTCTTTAGA
CGCTGTAGTAACGTGTCCACTCCGACCAAGTACAAGGACTCAGAGATCAT
GAGGGGTGCCCACCGTGTGCTTGCGGGCGTCCTCCGTCGCGGAACGCCGA
GCCTTGGGTCCAAGACTGTGGGCGGGTTTGTCCGCTACAGCTTCAAGTTC
AGCTCAAGTGCAGCAGTCAGCACCAAACCACACATACGGCCTGGATATGT
CATCCTCGGTGCAGGACTGGCCTGTGGCGCCGGTGCCGTGCTTTACTCAG
CCCACCTGAGGAAGAAAACTCTCGCCGCCACTCTGGAACCCGTCTTCATG
GCACAGCCAATCACAGACATGGCTACCATACAGCAGGGGTCAGACATGCG
CAGTCGGATGGAGCTGCTCATCCTGCGCGTGCAGTCCGACGTGTGTAAGG
CTATCGAGGAGCTCGAATCTACCGAAGGTGACAAGAAGTTTCTCATTGAT
CGGTGGGAGAGAAAGGAAGGCGGTGGGGGGATCAGCTGTGTGTTACAGGA
CGGACAGGTGTTTGAGAAAGCCGGGGTCAACATCTCCATCGTCCTGGGGA
ACCTTCCTCCCGCCGCTGTGCGACAGATGCGGGCCAGGGGTAAAGAGTTC
AAGACCAAGGACGACAGCGGCCTCCCGTTCTTTGCGGCGGGCGTCAGCTC
GGTCATCCACCCCCGCAGCCCCAACGTCCCCACCATCCACTTCAACTACC
GGTACTTCGAGGTGGTGGAGGAGGACGGCACGCGGCAGTGGTGGTTTGGA
GGGGGTACGGACCTGACACCGTCTTACCTGGACACAGAAGACGTCGTGCA
CTTCCACTCCACACTTAAGGATGCCTGTGACAAACACGACAAGTCTCTGT
ATCCAAAGTTCAAAAAGTGGTGTGATGACTACTTCACCATACCCCACCGT
GGGGAGTGCAGAGGGGTCGGTGGGATCTTCTTCGATGACGTTGACGAACC
ATCGCAGGAAGATGCATTCCGTTTCGTCCAGTCCTGTGCTGATGCAGTAT
TACCTTCCTACGTGCCTATCGTGAAGAAGCAGATGACACGCGGGTATGGC
CTCGCGGAACGTCAATGGCAACTTCTGCGCCGTGGAAGGTATGTGGAGTT
CAACCTCGTGTATGACAGAGGCACGAAGTTCGGTCTGGCCACCCCAGGCG
CCCGTATTGAGAGCATCCTGATGTCGCTCCCCCTAGCAGCCCGGTGGGAG
TACTGCCACGACCCCGCCCCGGGGTCACCAGAGGCGAAGATGGTGGAAGT
TCTCAAAAACCCCAGAGACTGGGTGGAATCTCAGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00061663-exon-Sc0000048-1564993656:485404..485459 | BlTCONS00061663-exon-Sc0000048-1564993656:485404..485459 | Branchiostoma lanceolatum | exon |
| BlTCONS00061663-exon-Sc0000048-1564993656:483653..484047 | BlTCONS00061663-exon-Sc0000048-1564993656:483653..484047 | Branchiostoma lanceolatum | exon |
| BlTCONS00061663-exon-Sc0000048-1564993656:481194..481842 | BlTCONS00061663-exon-Sc0000048-1564993656:481194..481842 | Branchiostoma lanceolatum | exon |
| BlTCONS00061663-exon-Sc0000048-1564993656:480427..480657 | BlTCONS00061663-exon-Sc0000048-1564993656:480427..480657 | Branchiostoma lanceolatum | exon |
| BlTCONS00061663-exon-Sc0000048-1564993656:478045..479994 | BlTCONS00061663-exon-Sc0000048-1564993656:478045..479994 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000048 | genome | Sc0000048:478045..485459 - |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF030439 |
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