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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000047:1495405..1503163- Legend: CDSexonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00061192 ID=BlTCONS00061192|Name=BlTCONS00061192|organism=Branchiostoma lanceolatum|type=mRNA|length=7759bp|location=Sequence derived from alignment at Sc0000047:1495405..1503163- (Branchiostoma lanceolatum)
ATCTTTTGCCAGTTTCACAGGTTTGTAATATCGGAATCATAGACATGGAA
AATATATACAGGTGTGCATGTCTGCTCGGTTTTCAGGTGAATATGGGTGT
TTTAGCAGGCAATGTGTAAGACTGCACGAGATCGACAGGAGGCGCTCATG
TAATGTGCATAGACTTTATTTGATCTCAAGAAGACTCATTTGATTGATTG
AAGCTTGATTGACTAGCCTCTACCAGGCTCCGCCGGATGGCTGGAAAAAT
AGTAGAAATTGGCCGTAATAGAGTGAATAGTGTGCCAAGGGAGTTAGCTA
CGGAGGGAGTACATTATGGCATAATGTACTCCCTCCGTAGCTAACTCCCT
TGGCACACTATTCACTCTATTACGGCCAATTTCTACTATTTTTCCAGCCA
TCCGGCGGAGCCTGGTAGAGGCTATGATTGATGACGGATGCTGATGTTTT
CAAAACTTCATTTTCCAAGTTTGAAATTATTGACATACTTTAAATACGTT
AATATTCACAGCTTTGTTTCGTGGTAACGTTAACCTCTTCACCGCAAACT
TGAAAGCACCAGGAAAATGCTTGTTTTGTCCTTCGCCNATGTTGCAGCTG
TGCTTGTTACCTGAAGTGACACTGAGTGACTGACTGAGATGCAAATGATC
CCCTATACCATAGATGACTGTGTCTTTTGTAAATTGCCACAGGTAAGAAG
ACAATAGGTATTGTGACAGACCACTCACTCTTCTGAATAGGGCACATAGC
TTAATTCACTCTCTTTTCTGCCTGATGCTTGTCTAATTGGCTGAATTGCA
AGATAAACAAGGGTGGATACACCCCAATTACCGAAGGGCTGTGAAGTGTA
CATCCTCTCTCCAATTCTACAAACAGAGAAGTACTTATTACTGGACATCC
GTGACACAATTTCTATGTCAGTGTTGCAGTTTTGTTCTCAGGAAGCTAGA
GTGACACACATCATCCTAACCGTTCTCCGGAAATTTTACAGATAAGGCTA
TTAATGAAGGAAGGCTTGAAACTGAAATTTGCAACCAAATCTGGTGCAGT
AATGAAGTAGCTGCTCCAGTTATCACTACGAAAATAAACAATTAGGTATT
GGAACTGAGCAAATTGACTTTTCCTGCATGTTGACATTCCTTGTTTGTCA
CAGATAGCTACAGTTACTGTTTCTGAAGATGACTCAGTAGCAAAATGTAC
CTTGAAAGCACCTTTTTCCTGGTAGCAACCTTTTGTCTCTGTGTGTGGTC
AAATGGTTGTACCATGTGTTGGCTAGCAACACTGTTCACTCCATGCTGCT
CCAAAAATCTGTGGCCTAAAAAAACTAATTGGCACAGTTGGACTCCTTCA
GGACTCAATTTCTGGCCATTTCTGCTTGCTCTTCTTTGCTCCACTAGAAT
GCTGTCGTCGAAAATACTGCCTACCAAGGAGGTAACCTCCTTGATCTTAC
TTACATACTTTTCTCAACTGCACTTCAAACAACTGAGTACAGAACATGCT
ACAACACAAAGGCAGCTGACATCCAATCCCACCCTGTTGACAGCCTGGGG
CTTGAAAAGGGCTGCGTAAATCAATAGGTAAACACACCTACAGTATCACT
TTACAAGCTTCTCTAGGGATAACAATGCAGAGGCCTTTGGGCTATTTCAA
TCAGAAACACATAATCTATGTTCAAGGAACTAAATGAAAATTTATTTCAA
ATTAAGTTTCTTAATCCAAGGTAACATTTCCCTCTTTCAATGATCAAATG
CAAATACATGCAAATGACAGATAATCAAATAGGGTCAAATAAGAAAAAGC
AGGTGTCACAATTGACAGGTACAAAATTGGCCACTTTCAGTACCAAAGTG
GTCAAAGTAAAATTTAGTCCTGACACCAAGCCTTCAGCCAAGTAATGAAA
TTTGTATAAGTGCCTTCAGCACTGCTAACTTGGCCTGGTTTGAGCAATTG
CTGTTTGGGCTTTTTCTTCTCCTTTTCACAAAGGAAATTCCACCGATTGT
GGGACTGGGCGTGTGTCATAAACTAGTTATTCCGCCCGGTGTCCACACCC
ACCCACTAATCGACTTCACATACTGCGAACGTCCTTGTTTGGGCAACTGA
CAAGGTGGGAGGAAGTCCCCTGTGTACACAAACACAAACCTGACGATGCA
ATATTTCACCTGCTGTCAAAAGTTTACAAAATTCACGTCCAAAAAAATCA
AGGCCATCACTTGACCTTGACATAACTTGGCGTTCACTTCTTGACCCTAA
TTTATCTACGGTAGCTCCTCTCTTCAGTTAAATCATGTAGCCCGCAACAA
CAACAGGTATTCCCTACACTGTGAAACAAACGATGCTGAAAAAAAGCATC
ACATATTTTCAGGAATTCGCGACGTGCCAGATACTTCACGTTCTCTCACC
AGGAACATAAATCTGGGGAAGCTATTCATCAGGAAGATTCCCCCGGGGGG
TCGGGTCGTGCTAACGGCGAAACAGCTAACGGTGCCCGAAAAATCTACCG
CGAACACCACGAGGCACAATCAACCCTGGCGACAAAGATAACCACAAAAG
CCAAAAGATAAAAGGTGATCGTATACCCATAATAATGACGTTCCTTGCTG
GGAAAAATGACGACCCAAAGACGAATGGCAGACGAAGACAGGAGAAAGGG
AGAGAGAAGCAACAAGAAGCTCCGAAAACGCTCGGTATGTCCTTGGTTTT
GCTCACCTTTTTCAGTCTCTCGGTTCCGATCGACCACGAAAAAAATGTCG
TCCGTGCCTGTCTGGATATTTCTCAGTAACTGGGGAGCTTTATCCACATC
CTGGGGATGCCTTTTGATCGCCAAATCTGCAGGAGATCGATGATTCACAC
AAACTGTGACACACACAGGCGGCCGCCTGGCTACACTCACTGCTTTGGCC
TTCCCGCAGTTTGTATTGTCAACAGTAGCGGCAACTGATTACATATTCAA
CAACTTAGATTCGAATATCAAAGGTGCGGAGAAATAACAATGCGCATAAC
AAAGTAACACAATTGTTCACTATAATGATGTAACTTGTTATTCATATTAC
TATAATATTTTTTGCGTTGGTAACTTTGAATTATCTTCCGTGATTGTTTA
TTTTTACTTCGATTTTGATCAAGTGTAATGGTGCTTCGAATAAGAGACTT
CATATTCGATGACGATCAGCCTACTCCAGCATGGCGGCCTCCTTGAACAG
CTGATTCCACAATCACACAAGATTTCTGCACTCCTTTCCTTACTCACAGT
CCAAAACGTCAAGCATAGCAATGCTAGGGCAGGAAATCTGACCGTAGGTC
GCAATGGAAGGGATCGTGTCTCGTATCGAGCGTGCCATGGCGAATCTGTC
GCTCTCATGTGACGAGCAGGGCGCGACTGCCTCCCCTGGCGCTTCTTCTT
TGATCCAGACCCTCGAAATCTTTTGCCAGTTTCACAGGTTTGTAATATCG
GAATCATAGACATGGAAAATATATACAGGTGTGCATGTCTGCTCGGTTTT
CAGGTGAATATGGGTGTTTTAGCAGGCAATGTGTAAGACTGCACGAGATC
GACAGGAGGCGCTCATGTAATGTGCATAGACTTTATTTGATCTCAAGAAG
ACTCATTTGATTGATTGAAGCTTGATTGATTAGCCTCTACCAGGCTCCGC
CGGATGGCTGGAAAAATAGTAGAAATTGGCCGTAATAGAGTGAATAGTGT
GCCAAGGGAGTTAGCTACGGAGGGAGTACATTATGGCATAATGTACTCCC
TCCGTAGCTAACTCCCTTGGCACACTATTCACTCTATTACGGCCAATTTC
TACTATTTTTCCAGCCATCCGGCGGAGCCTGGTAGAGGCTATGATTGATG
ACGGATGCTGATGTTTTCAAAACTTCATTTTCCAAGTTTGAAATTATTGA
CATACTTTAAATACGTTAATATTCACAGCTTTGTTTCGTGGTAACGTTAA
CCTCTTCACCGCAAACTTGAAAGCACCAGGAAAATGCTTGTTTTGTCCTT
CGCCTGCCTAACAAAGTAACATTACCTTGTTTCCACCACGGAGTTAGAAC
CACTGTAAACTCTCGATTTTCTCCCTACCACAAGATTTAATCACCGCAAA
TTTAGATTTATTTACATTACGTTTATTACATCATAAGTTATTGGTCATAA
TCAGGATCTGGCACTCGTGGCATAATACTGCAACACAGAGATGTTGTTTT
AGCTCAGATTATCGGAGTATACAGACGATGCCAAGAATCAGACATGTGCA
TTTATGTTAACATTACATGATATTTGACATGACAGAAGGGTTGGCTTGTC
AACAATTTCCAGGGAACCTGACAACAACAGGCAGCAGGTGTGCCTTTATC
TGTCTTTATGTTAACATTATAACATATATACTGGCATGATAGAACATGAA
GATGACACAATGATTGGCTTGTCAAAATTTTCCAGGGAACCTGAAAACAA
CAACAGGCGACAGGTGCTGCTGGACCGGCTCCACAAACAGCTGGCGCCCC
TGAGGGAGCTCCCACAATGCACCAGTGAGCTGGAGGCTGTCCAGGCCCTG
AGTGACGGTGTCTGCCGCCTGTACTTCCAACATGTGGGACAGAACAGGAA
TGTGGCAAAAAGAGCTGTCAAGGTCTGCATATCATAAACTACTTGGAAAC
ATTATGCATAACATTTATTACTATCAGAAGTTATTACATTGTTATTCTGT
GTCAATATAGTAGTTATGCAGCTGCGTTCACAAAATGTATCTATGATGAA
GGCAAGTCTAATAGCCTATTATATTTTACTTTTTTTTACACACAGTTTTT
TTATAGAATGTCAGTTTATTCTTAAATATCTGAGGATATTGTTGGTGTCA
GAAACTTTATTAAGTTATATGGCACTAGGTTAATCTATATGAAATTCATA
TTTTGTCCCATTTATAGTATTTAGCTGAACTTGTGAATAATGTTATGTTT
CAGGTCATAAAGGTGCTATACAAACTAGACAAGTCTACCATCGCCTCAAG
ACTAAGAAAAGAATGGAATCCTCTCCTCGGAGATGTGTGGTCTTTAAATG
ACCTTCAAAAAGGTGGGTTTTCATCTGTTCAAAAATGTAAAAGAGTACCT
GGCATATTTGGGAGTATGACATAAGTCACATAACATACTGTAAATGCATT
TAAGTTTGCATGGTTTTAATTTCATGCCAGAGAGGAAATGGAGTGTTCGC
AGTGGTTTTAAGTTCACGTTTAAGACAATAGTAAGACAAGGGGGTAGGAG
GGCACAAAAGTTTACGGTGGTCATAAGTTCACGACGAAGAGCTTACCGCG
AAAACCGCAAACATAAAACAAATGCAAACATGTCTGCATTCACAGTATTA
TGATTGCTATGAAATGTATTGCTATTGCAAGATTAGTCTAACTGCTTATT
TTTTTGTTTTTAGTATTTCAGGTATTGGATGAGCCAGTTCTAGTCAGCGA
ATGCATTCAGGACTTGTGGCCTCAGCTTCTGCTTAGTTTGGCTGGGACCT
GGCAGCAACTCCACCTAGAGATCAGCTCCAGTACTGCACCAGCTCTGATG
TTTGATAGGTGCTATCTAGCCACAAAGGTTAGAAGATGGAGAGGTTTTAA
TGTCAGTCATTTTGAAACACAGGCAAATCTATATATGTGACCACCTCTAC
ATAAGGACTTCTTAGACCCTTAGATTATTTTTTCCATTCACACAAGCATT
GAAAAGCCTGTCTATAATGTCACCATCCGTCCACATGGACCAGATTTTAT
AAGTCCCCCAAGAGGTCTTGTTGCACAATTTTGACTGTAAGATCAATTGA
TGTGAACCTATTGATGGAACAATACTAACATGGTCGAATGAGATTATTTT
TGTTGGAGGAAGAATTCTTTAACTTGACCAAATTAGCTTTCTATTCAGAT
CAAGTTCAAGTCTGTCATTTCATCCTCAGTGAGCATGAAGTTCCCTTCTC
TTTTAGATCTCCTTGCAGCTGTTCCAGGTACTTTCCTCAGGTGATGTTGG
GTTACAGCAGGTGTGTGAAGTGGGTACAGGTACACCTGCCATCCATGCCA
TCAGTAGCACCCTGCTGGAAGTCATATTCAGTCAGGTGAGTGCTTCTAGA
GGTCATTTTACTATCTTTTCCCTCAATCCATGATTCTACATAAGGCTGGA
GAAAATGGTTAGTAGATTGCTGAACATTTCATTATAGCAAAACCAACATT
TCAGGTCAGAAAACATAACTTTAATAGAATAACTAAAATTATTGCCTTTT
CTATCACCCTTCTTGCTCATGTATATAACATACTGTTTCCTGTTTGTATT
GAATATCTGTATTGCTGTATTGAATAGCTGTATTGCTGAAAGTTCAATGA
GCTTTTTTTTCCAAAGTGAGCATGTTTTACATTACCAAGTTTACATTACC
AAGTTTCATTCCAGCAACTCAATGTGAACACGTTTTATCTCGCAGGTTTG
CAGCCTGGACTGTAAGCTGTTTGCCTCCAATGCTCTAGGCTTCTTGTTAA
ACATGTCAAACAACTCTAAGGAGGCTGCAGAAACTGTCAATAAGCTTATA
AACTTACCAGGTGTGTTGTGAAAGTTACACTCTCTACACTAACAAATGCA
AAGTACAGTCAAACCTGCCTATAGCGGTCACTCAAGGGACTGGCCAAAAT
CGACCGCTATGGACAGGTGGCCGCTCTATAGAAACGGTTGATTGATTACG
AGCAATAAGTGGCACATGTTTTCTGTACCCACTGAGAAACATTTATTCAC
ATACATGTACAGTCAAACTTGGTCTACCGACCACTTCCACAAGACGACCA
TCGGCTCAAGATGACTGCTTTCGGTAGGTCCGGATTTTTCCACAAGTCGA
TACATCGATCCGCCCCCAATCCGGAGCACATGCGACCAAAATGTTGCCAA
AGACAACCGTGTCATTTTCAATTGCGCGGCGACATCATTTATCAGCAAAT
AATTGCGGAATTTCACGGTAAAATCAGCCTGTTTGGGTCGGATTCCTTGC
CGGGAGAAAAAACAACAGCTGCAAGATGGCGCTTGAGGTCATAGGGTCAT
GGGATAGTCTACTGTAATGTGGGTGCAGCTGCAATGTGTGAGTTATGATT
TTACTCTACATTAGATAGTACAAAATGTAAACTTATTTCGTCAAAGAAGT
TCTTTGAATAAAGAGAACAGAGTATGCAAAGAATGGATGGCTTTATAACC
TTTTTCTAGAGGATAAAAGGCGTCTGTCTTTTTTTTTAACAAACTGCTCC
CCCATGGTACTACTAGTGAAGTAACCCAAGTAAGCAAAGCGTCCCGCTAG
GACCGCGCACCAAGAGGCTCTTAGCGGTTTTGGAAATTCTAAACCAACAC
CAGGAGCAAAATAAAACCATGTACAACATTTTCATGGGTAACACTACAGC
TATAATGACATTTTTTTCCGCGGGGATTCGAAAGAAGCCTCCCGAATCTT
GCGGCGACCATGCGCCGTGACCGTNCATAAATTTGATAACTGCGTGAAAA
AATGAAGATTTTGAACCCGGCGTGCGGTGGCGATGCGGCTTCTACCGGCG
CGCCGTGACCGTTATCGGCAGTGTTACTGTACTCGCGGGACCGAAAATCG
TCTGGCCGCGACCGCGTTGGACAGGTGACCGCTATAGCCTAATTCTTAAT
GCTTATGTCAATGGGAAAAATCCAAGGGACCGACAAAAAGTGACCACTAT
GGGCAGGTGGCCGCTATGCAAAGGTGACCGCTAATACAGGTTTGACTGTA
TAAGTAAAA Coding sequence (CDS) from alignment at Sc0000047:1495405..1503163- >BlTCONS00061192 ID=BlTCONS00061192|Name=BlTCONS00061192|organism=Branchiostoma lanceolatum|type=CDS|length=732bp|location=Sequence derived from alignment at Sc0000047:1495405..1503163- (Branchiostoma lanceolatum)
ATCTTTTGCCAGTTTCACAGGGAACCTGACAACAACAGGCGACAGGTGCT
GCTGGACCGGCTCCACAAACAGCTGGCGCCCCTGAGGGAGCTCCCACAAT
GCACCAGTGAGCTGGAGGCTGTCCAGGCCCTGAGTGACGGTGTCTGCCGC
CTGTACTTCCAACATGTGGGACAGAACAGGAATGTGGCAAAAAGAGCTGT
CAAGGTCATAAAGGTGCTATACAAACTAGACAAGTCTACCATCGCCTCAA
GACTAAGAAAAGAATGGAATCCTCTCCTCGGAGATGTGTGGTCTTTAAAT
GACCTTCAAAAAGTATTTCAGGTATTGGATGAGCCAGTTCTAGTCAGCGA
ATGCATTCAGGACTTGTGGCCTCAGCTTCTGCTTAGTTTGGCTGGGACCT
GGCAGCAACTCCACCTAGAGATCAGCTCCAGTACTGCACCAGCTCTGATG
TTTGATAGGTGCTATCTAGCCACAAAGATCTCCTTGCAGCTGTTCCAGGT
ACTTTCCTCAGGTGATGTTGGGTTACAGCAGGTGTGTGAAGTGGGTACAG
GTACACCTGCCATCCATGCCATCAGTAGCACCCTGCTGGAAGTCATATTC
AGTCAGGTTTGCAGCCTGGACTGTAAGCTGTTTGCCTCCAATGCTCTAGG
CTTCTTGTTAAACATGTCAAACAACTCTAAGGAGGCTGCAGAAACTGTCA
ATAAGCTTATAAACTTACCAGGTGTGTTGTGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00061192-exon-Sc0000047-1564993656:1503144..1503163 | BlTCONS00061192-exon-Sc0000047-1564993656:1503144..1503163 | Branchiostoma lanceolatum | exon |
| BlTCONS00061192-exon-Sc0000047-1564993656:1498834..1498851 | BlTCONS00061192-exon-Sc0000047-1564993656:1498834..1498851 | Branchiostoma lanceolatum | exon |
| BlTCONS00061192-exon-Sc0000047-1564993656:1498542..1498707 | BlTCONS00061192-exon-Sc0000047-1564993656:1498542..1498707 | Branchiostoma lanceolatum | exon |
| BlTCONS00061192-exon-Sc0000047-1564993656:1498102..1498210 | BlTCONS00061192-exon-Sc0000047-1564993656:1498102..1498210 | Branchiostoma lanceolatum | exon |
| BlTCONS00061192-exon-Sc0000047-1564993656:1497587..1497750 | BlTCONS00061192-exon-Sc0000047-1564993656:1497587..1497750 | Branchiostoma lanceolatum | exon |
| BlTCONS00061192-exon-Sc0000047-1564993656:1497079..1497207 | BlTCONS00061192-exon-Sc0000047-1564993656:1497079..1497207 | Branchiostoma lanceolatum | exon |
| BlTCONS00061192-exon-Sc0000047-1564993656:1495405..1496718 | BlTCONS00061192-exon-Sc0000047-1564993656:1495405..1496718 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000047 | genome | Sc0000047:1495405..1503163 - |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF030252 |
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