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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000047:1495405..1499774- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00061191 ID=BlTCONS00061191|Name=BlTCONS00061191|organism=Branchiostoma lanceolatum|type=mRNA|length=4370bp|location=Sequence derived from alignment at Sc0000047:1495405..1499774- (Branchiostoma lanceolatum)
CGCTTCTTCTTTGATCCAGACCCTCGAAATCTTTTGCCAGTTTCACAGGT
TTGTAATATCGGAATCATAGACATGGAAAATATATACAGGTGTGCATGTC
TGCTCGGTTTTCAGGTGAATATGGGTGTTTTAGCAGGCAATGTGTAAGAC
TGCACGAGATCGACAGGAGGCGCTCATGTAATGTGCATAGACTTTATTTG
ATCTCAAGAAGACTCATTTGATTGATTGAAGCTTGATTGATTAGCCTCTA
CCAGGCTCCGCCGGATGGCTGGAAAAATAGTAGAAATTGGCCGTAATAGA
GTGAATAGTGTGCCAAGGGAGTTAGCTACGGAGGGAGTACATTATGGCAT
AATGTACTCCCTCCGTAGCTAACTCCCTTGGCACACTATTCACTCTATTA
CGGCCAATTTCTACTATTTTTCCAGCCATCCGGCGGAGCCTGGTAGAGGC
TATGATTGATGACGGATGCTGATGTTTTCAAAACTTCATTTTCCAAGTTT
GAAATTATTGACATACTTTAAATACGTTAATATTCACAGCTTTGTTTCGT
GGTAACGTTAACCTCTTCACCGCAAACTTGAAAGCACCAGGAAAATGCTT
GTTTTGTCCTTCGCCTGCCTAACAAAGTAACATTACCTTGTTTCCACCAC
GGAGTTAGAACCACTGTAAACTCTCGATTTTCTCCCTACCACAAGATTTA
ATCACCGCAAATTTAGATTTATTTACATTACGTTTATTACATCATAAGTT
ATTGGTCATAATCAGGATCTGGCACTCGTGGCATAATACTGCAACACAGA
GATGTTGTTTTAGCTCAGATTATCGGAGTATACAGACGATGCCAAGAATC
AGACATGTGCATTTATGTTAACATTACATGATATTTGACATGACAGAAGG
GTTGGCTTGTCAACAATTTCCAGGGAACCTGACAACAACAGGCAGCAGGT
GTGCCTTTATCTGTCTTTATGTTAACATTATAACATATATACTGGCATGA
TAGAACATGAAGATGACACAATGATTGGCTTGTCAAAATTTTCCAGGGAA
CCTGAAAACAACAACAGGCGACAGGTGCTGCTGGACCGGCTCCACAAACA
GCTGGCGCCCCTGAGGGAGCTCCCACAATGCACCAGTGAGCTGGAGGCTG
TCCAGGCCCTGAGTGACGGTGTCTGCCGCCTGTACTTCCAACATGTGGGA
CAGAACAGGAATGTGGCAAAAAGAGCTGTCAAGGTCTGCATATCATAAAC
TACTTGGAAACATTATGCATAACATTTATTACTATCAGAAGTTATTACAT
TGTTATTCTGTGTCAATATAGTAGTTATGCAGCTGCGTTCACAAAATGTA
TCTATGATGAAGGCAAGTCTAATAGCCTATTATATTTTACTTTTTTTTAC
ACACAGTTTTTTTATAGAATGTCAGTTTATTCTTAAATATCTGAGGATAT
TGTTGGTGTCAGAAACTTTATTAAGTTATATGGCACTAGGTTAATCTATA
TGAAATTCATATTTTGTCCCATTTATAGTATTTAGCTGAACTTGTGAATA
ATGTTATGTTTCAGGTCATAAAGGTGCTATACAAACTAGACAAGTCTACC
ATCGCCTCAAGACTAAGAAAAGAATGGAATCCTCTCCTCGGAGATGTGTG
GTCTTTAAATGACCTTCAAAAAGGTGGGTTTTCATCTGTTCAAAAATGTA
AAAGAGTACCTGGCATATTTGGGAGTATGACATAAGTCACATAACATACT
GTAAATGCATTTAAGTTTGCATGGTTTTAATTTCATGCCAGAGAGGAAAT
GGAGTGTTCGCAGTGGTTTTAAGTTCACGTTTAAGACAATAGTAAGACAA
GGGGGTAGGAGGGCACAAAAGTTTACGGTGGTCATAAGTTCACGACGAAG
AGCTTACCGCGAAAACCGCAAACATAAAACAAATGCAAACATGTCTGCAT
TCACAGTATTATGATTGCTATGAAATGTATTGCTATTGCAAGATTAGTCT
AACTGCTTATTTTTTTGTTTTTAGTATTTCAGGTATTGGATGAGCCAGTT
CTAGTCAGCGAATGCATTCAGGACTTGTGGCCTCAGCTTCTGCTTAGTTT
GGCTGGGACCTGGCAGCAACTCCACCTAGAGATCAGCTCCAGTACTGCAC
CAGCTCTGATGTTTGATAGGTGCTATCTAGCCACAAAGGTTAGAAGATGG
AGAGGTTTTAATGTCAGTCATTTTGAAACACAGGCAAATCTATATATGTG
ACCACCTCTACATAAGGACTTCTTAGACCCTTAGATTATTTTTTCCATTC
ACACAAGCATTGAAAAGCCTGTCTATAATGTCACCATCCGTCCACATGGA
CCAGATTTTATAAGTCCCCCAAGAGGTCTTGTTGCACAATTTTGACTGTA
AGATCAATTGATGTGAACCTATTGATGGAACAATACTAACATGGTCGAAT
GAGATTATTTTTGTTGGAGGAAGAATTCTTTAACTTGACCAAATTAGCTT
TCTATTCAGATCAAGTTCAAGTCTGTCATTTCATCCTCAGTGAGCATGAA
GTTCCCTTCTCTTTTAGATCTCCTTGCAGCTGTTCCAGGTACTTTCCTCA
GGTGATGTTGGGTTACAGCAGGTGTGTGAAGTGGGTACAGGTACACCTGC
CATCCATGCCATCAGTAGCACCCTGCTGGAAGTCATATTCAGTCAGGTGA
GTGCTTCTAGAGGTCATTTTACTATCTTTTCCCTCAATCCATGATTCTAC
ATAAGGCTGGAGAAAATGGTTAGTAGATTGCTGAACATTTCATTATAGCA
AAACCAACATTTCAGGTCAGAAAACATAACTTTAATAGAATAACTAAAAT
TATTGCCTTTTCTATCACCCTTCTTGCTCATGTATATAACATACTGTTTC
CTGTTTGTATTGAATATCTGTATTGCTGTATTGAATAGCTGTATTGCTGA
AAGTTCAATGAGCTTTTTTTTCCAAAGTGAGCATGTTTTACATTACCAAG
TTTACATTACCAAGTTTCATTCCAGCAACTCAATGTGAACACGTTTTATC
TCGCAGGTTTGCAGCCTGGACTGTAAGCTGTTTGCCTCCAATGCTCTAGG
CTTCTTGTTAAACATGTCAAACAACTCTAAGGAGGCTGCAGAAACTGTCA
ATAAGCTTATAAACTTACCAGGTGTGTTGTGAAAGTTACACTCTCTACAC
TAACAAATGCAAAGTACAGTCAAACCTGCCTATAGCGGTCACTCAAGGGA
CTGGCCAAAATCGACCGCTATGGACAGGTGGCCGCTCTATAGAAACGGTT
GATTGATTACGAGCAATAAGTGGCACATGTTTTCTGTACCCACTGAGAAA
CATTTATTCACATACATGTACAGTCAAACTTGGTCTACCGACCACTTCCA
CAAGACGACCATCGGCTCAAGATGACTGCTTTCGGTAGGTCCGGATTTTT
CCACAAGTCGATACATCGATCCGCCCCCAATCCGGAGCACATGCGACCAA
AATGTTGCCAAAGACAACCGTGTCATTTTCAATTGCGCGGCGACATCATT
TATCAGCAAATAATTGCGGAATTTCACGGTAAAATCAGCCTGTTTGGGTC
GGATTCCTTGCCGGGAGAAAAAACAACAGCTGCAAGATGGCGCTTGAGGT
CATAGGGTCATGGGATAGTCTACTGTAATGTGGGTGCAGCTGCAATGTGT
GAGTTATGATTTTACTCTACATTAGATAGTACAAAATGTAAACTTATTTC
GTCAAAGAAGTTCTTTGAATAAAGAGAACAGAGTATGCAAAGAATGGATG
GCTTTATAACCTTTTTCTAGAGGATAAAAGGCGTCTGTCTTTTTTTTTAA
CAAACTGCTCCCCCATGGTACTACTAGTGAAGTAACCCAAGTAAGCAAAG
CGTCCCGCTAGGACCGCGCACCAAGAGGCTCTTAGCGGTTTTGGAAATTC
TAAACCAACACCAGGAGCAAAATAAAACCATGTACAACATTTTCATGGGT
AACACTACAGCTATAATGACATTTTTTTCCGCGGGGATTCGAAAGAAGCC
TCCCGAATCTTGCGGCGACCATGCGCCGTGACCGTNCATAAATTTGATAA
CTGCGTGAAAAAATGAAGATTTTGAACCCGGCGTGCGGTGGCGATGCGGC
TTCTACCGGCGCGCCGTGACCGTTATCGGCAGTGTTACTGTACTCGCGGG
ACCGAAAATCGTCTGGCCGCGACCGCGTTGGACAGGTGACCGCTATAGCC
TAATTCTTAATGCTTATGTCAATGGGAAAAATCCAAGGGACCGACAAAAA
GTGACCACTATGGGCAGGTGGCCGCTATGCAAAGGTGACCGCTAATACAG
GTTTGACTGTATAAGTAAAA Coding sequence (CDS) from alignment at Sc0000047:1495405..1499774- >BlTCONS00061191 ID=BlTCONS00061191|Name=BlTCONS00061191|organism=Branchiostoma lanceolatum|type=CDS|length=426bp|location=Sequence derived from alignment at Sc0000047:1495405..1499774- (Branchiostoma lanceolatum)
ATGACCTTCAAAAAGGTATTGGATGAGCCAGTTCTAGTCAGCGAATGCAT
TCAGGACTTGTGGCCTCAGCTTCTGCTTAGTTTGGCTGGGACCTGGCAGC
AACTCCACCTAGAGATCAGCTCCAGTACTGCACCAGCTCTGATGTTTGAT
AGGTGCTATCTAGCCACAAAGATCTCCTTGCAGCTGTTCCAGGTACTTTC
CTCAGGTGATGTTGGGTTACAGCAGGTGTGTGAAGTGGGTACAGGTACAC
CTGCCATCCATGCCATCAGTAGCACCCTGCTGGAAGTCATATTCAGTCAG
GTTTGCAGCCTGGACTGTAAGCTGTTTGCCTCCAATGCTCTAGGCTTCTT
GTTAAACATGTCAAACAACTCTAAGGAGGCTGCAGAAACTGTCAATAAGC
TTATAAACTTACCAGGTGTGTTGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00061191-exon-Sc0000047-1564993656:1499727..1499774 | BlTCONS00061191-exon-Sc0000047-1564993656:1499727..1499774 | Branchiostoma lanceolatum | exon |
| BlTCONS00061191-exon-Sc0000047-1564993656:1498827..1498851 | BlTCONS00061191-exon-Sc0000047-1564993656:1498827..1498851 | Branchiostoma lanceolatum | exon |
| BlTCONS00061191-exon-Sc0000047-1564993656:1498542..1498700 | BlTCONS00061191-exon-Sc0000047-1564993656:1498542..1498700 | Branchiostoma lanceolatum | exon |
| BlTCONS00061191-exon-Sc0000047-1564993656:1498102..1498210 | BlTCONS00061191-exon-Sc0000047-1564993656:1498102..1498210 | Branchiostoma lanceolatum | exon |
| BlTCONS00061191-exon-Sc0000047-1564993656:1497587..1497742 | BlTCONS00061191-exon-Sc0000047-1564993656:1497587..1497742 | Branchiostoma lanceolatum | exon |
| BlTCONS00061191-exon-Sc0000047-1564993656:1497079..1497207 | BlTCONS00061191-exon-Sc0000047-1564993656:1497079..1497207 | Branchiostoma lanceolatum | exon |
| BlTCONS00061191-exon-Sc0000047-1564993656:1495405..1496718 | BlTCONS00061191-exon-Sc0000047-1564993656:1495405..1496718 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000047 | genome | Sc0000047:1495405..1499774 - |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF030252 |
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