BlTCONS00038045 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00038045
Unique NameBlTCONS00038045
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000019:685339..688286+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00038045 ID=BlTCONS00038045|Name=BlTCONS00038045|organism=Branchiostoma lanceolatum|type=mRNA|length=2948bp|location=Sequence derived from alignment at Sc0000019:685339..688286+ (Branchiostoma lanceolatum)
CTCTGCATCATCAGGTTTGTGAATTGCAGGGAATCGAACTTTTGCACCAA AACAACACAGCACAACACACTCACAATACGCTCGTTCTCACTTAAATGTA CACATTTTGTAACTTCCATTGCTGTTGGAAGTAAGAGGTTCCCGACAGTA AGATTTGCCACATATAAGGTGCCAAACCGTGTCGTTTTTCTGACGACTTA AAAGTTTTCTGGCTTTTAAAAATGACAGTTTGGCACCTTATATGTGGCGT ATCTTAATGCCAGAAACGTCTTACTTCAAACGGTATTGGAAGTTAATAAT TGTGTACATTTAATGAGAACGAGCAAATGGAGCTTATATAACATGTGTGG CTGTCACTGCAGCTTCTTCAAAGCAAATGACTTGTGGTCATAAGCTGCTG GAATACTCTGTAACTAGTCATCTCTCTTGAAGTTGAAGAATACAAAAGTC AAAGATTCGGAGTGGAATCCATGTTGTGCTCAGTTGAGTTTTGTTGAGTT GTGTTACGTTGTATTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTTGTGTT GTGTTGGAAGGAAAGGCCAGCTGTCTAAAAAGTATTTAATCAACACCAGG AAATGTGCAAGTATAATGCTTGAATGTGTTTCCTTTCTTGTGGTCGAAGG AATAATCAAAGCAAACTGTTCCCCAGCAGCGTCCCAGTCTCAGCAAAAGA AGGGCCTGTCCCTGACCCGGGAACAGATGCTGGCAGCTCAGGAGATGTTC AGAACATCCAACAAGGTGATTATGGTAGTGTGTATGGTTCAGGGCTAGTG GCTTAGGACACTGCTTGGGAAGAAGGCCAAGAGTTTGGATCCTTGCTTGA TTTTGACTTGCATACTCATGGTCAAGGGTTTGCAGTTGTTTTAATGGACT GGGAAAAGATATTGTTTATTCGACTGATCCATTTCACCGGAACAATGTAT ATGGTACAAGTACCTGTACAAATGGTCTGTTTTCGTTATCAAGACCAGTG TAAGAATGCATGTACATGTAGCTTCCCAGCAAGCTAAAACTGAATGGAGA AACATTGTTAGCATGGTTGTGCTTGTGGCTCTGATTGTGATTCTGTTAAT GATGAAAAAGTATTACTCAAGATCATTTTATCTGCTATGGATGGATTGTT GTGATATTTTGTATGTGGTTCCATATAAGTCATAAGTTTCACGAACTATG GTATGATATGCATAGGTAAATGAGAAAAGGATTATTGGCAAAGGTGTGAA GTCATTTAATCTTTTGCTCCATTTTTCTCAAGGTCACGCGGCCGGAAAAG GCGCTGATTCTCGGCTTCATGGCGGGGTCACGCGAGAACCCGTGTCCACA TCAGGGCGACAGCGTCACGATCAAGCTGAGCGAACACACGGAGACCGTGC CCAAACCGGATGGAACCGGCGAGGCCAACATGGTCGTGGACACGCTGTTT GAGATGAACTACAAAACGGGGGAGTGGAAGAGACTGAAGAAATACAGGCC AACCGTCTGATCTGCACTTCTCTTCTGTCCAGTTTCTTACAAGAAAAGAA AACATCTTGCACCTCCTCAAGAATATGTAGCAATGAAGAGAAGAGATGGA AAGAAACTGAAAATCTACAGGCCGACCATCTGATCTGTATTTCTGTCCAG TTTATCAAAAGAAAAAATACAATCTTGAGCTTTCTTTAAGGTGTATAGCA GTATCTAATGCCAGTTTAAGATGAACTACAAAACGGGGGAGTGGAAGAAA CTGAAGAAATACAGTCCAGCCGTCTGATCTGTAATCGTGCACAGTTTCTT ACAAGAAAAGAAAACATTTTGACAATGCCTGATGCCAGTATATAATGCAT GTTCAATATGAACTGTGATACAGGAAAAATGAAAGGAAGACAGGAAAGTA AAAGAGACTGAAGAAATAATGTATTGTATGTCCAGTTTCAAAAAGAAACC TCCTCAAGATGTGCAACAATATACCTGACAAGACCTGTTTGAGATGTAAT ACATGTGTAAGACAGGAGAGAGAGGAACAGCCTTAGGAAATACAGGCCAA CTGTGTGATCTGACATCTGTCCAGTTTCAAGGAAAGAAAACATCTTTCCT CTCCTATAAGATGTGCAAATTGGTCCTATTCGAGATGAGCTAGGAAGAAA GGAGATGGGAAAAGACTAAGACATACAGACCAACTCTATGAACTGTATAT CTTTCCAATCTCTTATCCAAATGAGCACATACATGCAAAATTGATATGTT ATAATGCTCAGACACTGATGCGGAAGGACGATATATTAAGTAGAGTGCAA AGGACAAGAGAAGTACAAGCCAGTATGCTGAACTAGTGAGAATGCAGCTT AACTAGTTATAAAACATATTTCAGCTTAAGTATATTAAGCATTATGAACC TGTACCCGAACATGGCAAACTGTTAGAAGGTGATACAATGCTATTACTAG TATTAGTGCTTACATCTTTATTTAGTGTCAGAAGTGCAGTGTAACAGTGT GAATACATTGACTCGGACAGAACAGATATGGACAGGTATATCCATTGTAC CTTAGCAGCAGTAAACAGTGTCTTGGGGTCAGGTGTTATGGTCTCATAAC TGACAACATGCGAGGCATTCTTAGTCTTGGCAATACCAGCTGAGGCACTG AGGGTACAGTTTCAAGGAATTTGTTGTTTTGCATAGGGCTTCTGTTTGGC CTTTGCTCTACTGACTTATGCTGTTATCAATACATATTTAGTACCTGTAT GAAGATAGAATAGAAATATGGTACAACTGTTACAATATCTATTGCCTCTT TACTTGAAATGTTACCCTCTCAAATTAAAACATCTCTCAGATAAAAAATG TCACATACGTTCTTATAGCTTAGCCAACCAACATGGCCGACAATTACGTC ATTATCACGTGACTCCAAACAGCTTATTGCCGCGCTGGCCCTCCTCGG

Coding sequence (CDS) from alignment at Sc0000019:685339..688286+

>BlTCONS00038045 ID=BlTCONS00038045|Name=BlTCONS00038045|organism=Branchiostoma lanceolatum|type=CDS|length=330bp|location=Sequence derived from alignment at Sc0000019:685339..688286+ (Branchiostoma lanceolatum)
TCTGCATCATCAGCAGCGTCCCAGTCTCAGCAAAAGAAGGGCCTGTCCCT
GACCCGGGAACAGATGCTGGCAGCTCAGGAGATGTTCAGAACATCCAACA
AGGTCACGCGGCCGGAAAAGGCGCTGATTCTCGGCTTCATGGCGGGGTCA
CGCGAGAACCCGTGTCCACATCAGGGCGACAGCGTCACGATCAAGCTGAG
CGAACACACGGAGACCGTGCCCAAACCGGATGGAACCGGCGAGGCCAACA
TGGTCGTGGACACGCTGTTTGAGATGAACTACAAAACGGGGGAGTGGAAG
AGACTGAAGAAATACAGGCCAACCGTCTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00038045BlTCONS00038045-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00038045-exon-Sc0000019-1564993656:685339..685352BlTCONS00038045-exon-Sc0000019-1564993656:685339..685352Branchiostoma lanceolatumexon
BlTCONS00038045-exon-Sc0000019-1564993656:686015..686103BlTCONS00038045-exon-Sc0000019-1564993656:686015..686103Branchiostoma lanceolatumexon
BlTCONS00038045-exon-Sc0000019-1564993656:686621..688286BlTCONS00038045-exon-Sc0000019-1564993656:686621..688286Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000019genomeSc0000019:685339..688286 +
Properties
Property NameValue
GeneIDBlCUFF018737