BlTCONS00034976 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00034976
Unique NameBlTCONS00034976
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000016:799622..802160-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00034976 ID=BlTCONS00034976|Name=BlTCONS00034976|organism=Branchiostoma lanceolatum|type=mRNA|length=2539bp|location=Sequence derived from alignment at Sc0000016:799622..802160- (Branchiostoma lanceolatum)
ACCGTTCATGCAGCAGGCGGACTTCCGGAAACTCCGCCCGTCGTACGAGA AGGAGCTGGCCATCAGGAACTCGCTCAACAAGTTCGGCAGGAAGTTCACA GGTGGGACAGCAGTGGGGTCAGGGTTTGGGGTTATGGGTCAGGTGTGGGG TTAGGGGTTAGAGTAAGTGGTTAGAGTCAGGGTAAGACGGTTAGGGGGCA TGGCGGCGGCGACCACCAACATGGCTGCGGCCGACACCAACATGGCTGCG GCCAACACCAACATGGCTGCGGCCACCAACATGGCTGCGGCCACCAACAT GGCTGCGGCCACCAACATGGCGGCGGCCACCACTAACATGGCGGCGGCGA CCACCAACATGGCGGCGGCGACCACCAACATGGCGGCGACCACCAACATG GCGGCGGCCGCCGATATGACAGCTAAAGTTAATCAAAACCAAATTTAAAC AGATTAAAATCTCGTCTATAAACTTAATTCCCTTCCCCTTCAGGTGACCC CGGGTACAAGGGCCGAGGCGTCCAGCCCGCCAAGACGGAACTTCCAGACG TCCCGAAGAAACCGCCGTCTCCAAAGAAGCCGAAAAGGAAGACGTCTTAT CCTTCATTAGACTTCAAGACGTTACCAGAGCTCTATCAAGGTCAGTATAC CTTAGATGAGCAGCCCTCATATATACTGGGGGCGGGCAAGACAGAGGCTG TTGATTCTCCTTATGTTTAGTTACGGACTGGACAAGAGTGTATAACAGAA GACAAACTAAAAGGAAACACAGATATAGAGAATTGTGCGAGGAACCAGAA AAGAGAAACTGTTAATGATTCTGACTTCAAGCATAGAATTAACTTGAAAT GTAACGTAATTTTGTGTGCTTTCTGTTTTATTCAGGAGGTTATATTTATG AAGCCAGTATAATAAGTGTGCGTAGTTTGCCCGTAGGCGCCCGTCCCCAG ACAAAGATCTTAAGGAGCGTACTTAAATGACCTCCTCCTTCCCCAGAGAA CCTGCGTAAGAAGGAGGCGCAGCGGAGGCAGCAGGAGAAGGAGGAGCGGC AGAAGAAACGGCGGGAGAAGAAGAAGGGCGAGGCTGATGACGTCATCAGG TTGCCACAGCTGGCGCACGCCGCGCTGCAGAAGATGCATGACGTCAGCAA ACAGAGTAAGGCATTGTTTGAATGCTCATTGAAACTTTTTAAAACCAGGT AAAAAAAAAATACTATACTAGTATATCCTGATAAAGGATTTTTTTTAAAT TGACGTTCTGCTGCAGTACCAAGAAAAGCAGCCAGATGGCGCCAAATTTA CATTGAACTTTGATTTTTTTCTTTCCAATAAATACCCACATACCAAATAT CATTACGATCCATTTAGAGGTTCGTAGGATATGCTGACCAGAACTATGCG GAAGCACGTACAGACATACAGACACACCCAAAACAATATCTTCTTTTTTG GAGGGAGCAAATTTTGATACACATACACTCTAACCAAACCTTCCCGTCCG TAGGGCGTTCCTTGCCGGGCTCTGAGGGCTTGAAGCTCGGCACTTGGGGG CCTGGAGACCGCCGGCCCAGGTCTACACGCCGCCATGGCCTCACCGTATT CCCTACAATGTCTAACCAAACCTTCCCGTCCGTAGGGCGTTCCTTGTCGG GCTCTGAGAGCGGGATGAAGCTGGTTGAAGCTCGGCACTCCGGTGCCTGG AGACCGCCGGCCCAGGTCTACACGCCGCCCTGGCCTCACCGTATTCCCTA CAATGTCTAACCAAACCTTCCCGTCCCCAGGGCGTTCCTTGCCGGGCTCT GAGAGCGGGATGAAGCTGGTCGAAGCTCGGCACTCCGGAGCCTGGAGACC GCCGGCGCAGGTCTACACGCCGCCCTGGCCTCACCACATTCCCTACCACA CACTCTAACCAAACCTTCCCGTCCCCAGGGCGCTCCTTGCCGGGCTCCGA GGGCGGGATGAAGCTGGTTGAAGCTCGGCACTCCGGTGCCTGGAGACCGC CGGCCCAGGTCTACACGCCGCCCTGGCCTCACCACATTCCCTACAATGTC TAACCAAACCTTCCCGTCCCTAGGGCGTTCCTTGTCGGGCTCTGAGGGCG GGATGAAGCTGGTTGAAGCTCGGCACTCCGGTGCCTGGAGACCGCCGGCC CAGGTCTACACGCCGCCCTGGCCTCACCGTATTCCCTACAATGTCTAACC AAACCTTCCCGTCCCCAGGGCGTTCCTTGCCGGGCTCTGAGAGCGGGATG AAGCTGGTTGAAGCTCGGCACTCCGGGGCCTGGAGACCGCCGGCGCAGGT CTACACGCCGCCCTGGCCTCACCGTATTCCCTACAATGTCTAACCAAACC TTCCCGTCCGTAGGGCGTTCCTTGCCGGGCTCTGAGAGCGGGATGAAGCT GGTAGAAGCTCGGCACTCCGGAGCCTGGAGACCGCCGGCCCAGGTCTACA CGCCGCCCTGGCCTCACCACATTCCCCACCACACACTCTAACCAAACCTT CCCGTCCACAGGGCGTTCCTTGCCGGGCTCTGAGAGCGG

Coding sequence (CDS) from alignment at Sc0000016:799622..802160-

>BlTCONS00034976 ID=BlTCONS00034976|Name=BlTCONS00034976|organism=Branchiostoma lanceolatum|type=CDS|length=432bp|location=Sequence derived from alignment at Sc0000016:799622..802160- (Branchiostoma lanceolatum)
CCGTTCATGCAGCAGGCGGACTTCCGGAAACTCCGCCCGTCGTACGAGAA
GGAGCTGGCCATCAGGAACTCGCTCAACAAGTTCGGCAGGAAGTTCACAG
GTGACCCCGGGTACAAGGGCCGAGGCGTCCAGCCCGCCAAGACGGAACTT
CCAGACGTCCCGAAGAAACCGCCGTCTCCAAAGAAGCCGAAAAGGAAGAC
GTCTTATCCTTCATTAGACTTCAAGACGTTACCAGAGCTCTATCAAGAGA
ACCTGCGTAAGAAGGAGGCGCAGCGGAGGCAGCAGGAGAAGGAGGAGCGG
CAGAAGAAACGGCGGGAGAAGAAGAAGGGCGAGGCTGATGACGTCATCAG
GTTGCCACAGCTGGCGCACGCCGCGCTGCAGAAGATGCATGACGTCAGCA
AACAGAGGCGTTCCTTGCCGGGCTCTGAGAGC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00034976BlTCONS00034976-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00034976-exon-Sc0000016-1564993656:802060..802160BlTCONS00034976-exon-Sc0000016-1564993656:802060..802160Branchiostoma lanceolatumexon
BlTCONS00034976-exon-Sc0000016-1564993656:801521..801667BlTCONS00034976-exon-Sc0000016-1564993656:801521..801667Branchiostoma lanceolatumexon
BlTCONS00034976-exon-Sc0000016-1564993656:801006..801164BlTCONS00034976-exon-Sc0000016-1564993656:801006..801164Branchiostoma lanceolatumexon
BlTCONS00034976-exon-Sc0000016-1564993656:799622..799649BlTCONS00034976-exon-Sc0000016-1564993656:799622..799649Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000016genomeSc0000016:799622..802160 -
Properties
Property NameValue
GeneIDBlCUFF017100