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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000002:3548925..3557748- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00007972 ID=BlTCONS00007972|Name=BlTCONS00007972|organism=Branchiostoma lanceolatum|type=mRNA|length=8824bp|location=Sequence derived from alignment at Sc0000002:3548925..3557748- (Branchiostoma lanceolatum)
CGCTGAACAACAATTCACACGGACAAATACTATCGCCTTGAATCAAGATG
GCAAGCAAGATGTCGACGGAAGATTTCGACGACCAGTTTTTGACGTGTCC
TGTTTGCATGCTGCACTTCCGGGACCCCAGAATCCTGCCATGTCTGCACA
CATTTTGTAGGGAGTGTCTGCAAGAATGGGCCACTAAACAACAGCCGCTG
GAGTGTCCAACCTGCCGCACACAGGTCAGTCTACCAGACCAAGGCGTGGA
CGGACTCAGGACCAACTTCTACGTCAACAACCTGCTGGATTTCGCGGCCG
TGAAGAAAGGGGCGGGGCCAGGTGTGCCGTGCCAGGTGTGCGAGGGGAAT
GTGGAGGGGTCAAAGTCTTGGTGTGCCGATTGCGCTACATTAATGTGTGA
GTCATGCGCGGCAGTACACCGGAAACTTCCATCTACAAAAGACCACGAAG
TTACCACCGAAGAAACACTTAAAGCAGATAGAGGTGTGAGCAAATTTCAG
CGCAAACGGCACTGCCACAAACACAAGAACCAAGAGCTGGTTTTCTACTG
TGAGAGCTGTAAAGATTTGATTTGTACAGCATGTACCGTGGTCGACCATC
GACCGGGCAAAGATCACAATCCGATAGAAATCGCCACTGTTGCTAAGAAC
AAGAAAGAAACCCTGCAAGAACTTCTTCGGCAGATAGATCCGCGTCTGAG
GGAAATAAAGGCGTCTGTTAAGGAAGCTGAGAAGAAGATGACAAACTTAA
TTCCCTCCAAAGAAGTAGCCATAAACAAAACCAACACGTATTTCCACCGA
CTTATCGACCTTCTGCAAGAGCGTAGAAAGACGATTTTGAGCCAGATTGA
CGAACAGTGCCGAGCCGATGGCAAGGCTCTGCAGACCAAGAAGGAAGCAA
TAGAGTTTGAGTTGGCCGGACTGACGAGCGCACAAACGTTCTGTCAACAA
GCTGTGGAACACGGAAGTGACGTGCACATTCTGGAGGTGGGAAATCAAGT
TCAAACAAGGGTAGAAACTCTGCTGGCAAAGGAACTGGACCTGGAGTCCA
ACTGGAGCGAGTTTCAGTTCGTAGAAAACACAGCTGTAACTGACTTTGCA
GAAGAAATTGGGAACCTTGGTGGTTTACAGACGGACGTTGACGCGTCGAA
GTGTAAAGTTGTTGTAAAGCCGGCAGTCCAGGGGTTTCAATGTGTCGCCA
TTCTGACGACAATGAACAGAGACGGGCAGGCGTGTGTCACAAACAGCAAA
GCGATCACAGCCAACATGAAGGACCCTTCTCGAGCAAACGTCCCGACGAA
ACTTGACATGAGGAGTGGAGGAGTGTGGGAAATATCGTACTTGTCCAAAG
TTACGGGCGACCATGAGTTAGAGGTCAAGGTCAACTCACAACATGTGTCA
GGAAGTCCGTTTGGTGTTAAGGTACAAAACAGGGAGACCCCAGTGTTTAC
TATCGGTCGAGAGGGTAGTGGGATGGGGGAACTGAGCAATCCGGCAGGTG
TCGTGGTTGATAGGGACGGCAACATTGCAGTGCTGGAGCACGCGAACAAA
CGGGTTCAGATATTTGACGCAAACAAAGGTCACTCTTTGAACAGTTTCCC
CGTTGACGGCGAGATTCCATTCGGTATTGATGTAGACTCCAACGGACGTT
TTATTGTGACGTCGTGGGGTGAAAATTACGGAACAAGACGTTATTCGCAG
GAAGGCCAACTTTTGGACACATTCCAATCTGACAGTTTCCAAAACCCTCT
TGGCCTTAAAGTTCTGAAGGACGGCCGCATGGTGGTGGCGGGAGGCCTAC
AGAAACTATGTCTTCTCCTGCAGCCTGACGGGAGCCTCATCCGGGAGATC
GGCAAGGGGCGGTTGAAAACCCCAATCTTTGTGACGGCAGATGAGTCACG
TGATGTGCTGTTCGTCACAGATATCAGTGCACACAAGATTTGTGCGTTCG
ACTTTGACGGAAACTTAATGTTCGATTTTGGCAATCAGGGTAAAAATGAT
GGAGAGTTTCAACAACCTGGAGGTGTAGCATTAGACCCGTTAGGTAACGT
CATTGTAGGTAGCGAAGGAGACGGCCGTGTACAGGTGTTCGGGCCCGACG
GAACATTTATTCGGACTGTGGCAACAGTGAAAGGGAATTGTGCCTGTGGA
ATCACACTAACTCCAGATGGTTGCGTAGCAGTAGCATGTACGGTTGGACA
TTGTATAGAAGTGTACAGATACATGTAATATCGTCTTACTGTTTGTGCTT
CTTTCTGTTATATTTTATTTAATTTACACATGTTTGTACATATGCTCCTG
TATGTGAAATTTCTGTTTATTTGCATTGATGATTACATGTACCAAACTTA
AGTTCGGAGTTCATACTTACGTTCATCCACCTTTTGTATGTTATACATTC
ATTTATTTACTACACCTTGTGTATAGTCTGCTTTTAGTCGATCATGTTCA
TCTCTGTACTTCTGATCTTTTTGTTTATGCAATTAATGTAACCTTATATG
GTGTCTTATAAGCCGGCATGGGCTGGGCGCATAATGGCACAAGACACGTA
CGTTAAAAAAGTTTTCATTCATTCATTCATTCATTCATTCATATAATACG
GGTGCCAACGGCCAATAATCTATAGGAGCACCTGGTATGATATGGCTTTG
GCATATAGCCGTTCATTTATTGGTAGTCTTGTTGTCGCTCTTATTCTTTT
ACTTCGCCGTAAATAATGTGTCATTTTTGCTGTAGATTGGCAAAGTGCTT
TCATGCAGTGTAATTGAACGGATCCGGACAAGAACTTGAACTCAGAGTCC
TGTCAAGATCATTGTAAAAGGATCTCTTCATTTATTATGTAAGTTAAGTC
TCAATTTGCATAATATGTCCTTCCTTATGTACATTTCTGCATACTAGATA
ATAAATGTCATTGAAAGCCATCGTTCCTTTGTTCAGTCATTCCCCTTGGA
ACACTGACAAAAACGCCCCTGCAGTTCCAGAGCAAGCAGCTAGGGGGCCC
AAACCTACACCACTTTTTCCTTACATCACAAACTATCTGCCTCCAACAAA
TCAAGACCATAGCACGTCCAGATCAAAAGATATTAAAAACCGAATTTTCG
AAACAAAAGTTCTGCTGTAGTACCAAGGTCACGTACCAGGTGGTCCAAAA
TCGACATTGACCTTTGTCTTCCCAACACCTACCAACATTCCAAATATCAT
CGTAATCCATCCAGAGGTACTTCAAGTTATGCTGACTAAAATCACATACA
AAATATCAACAGTTCGTTCATGAATAGCTGATTCTCAGTTTACTATGCTG
TTCACGCACGCACCTATTGGCCAAGCTAGATAAATGGGTTTGCCCCCGCC
AATACATGAAGTATTAAATTAGGGGTTGCTGTAAATGTATGATGAATGAA
ATGAAACTATTTTGTTTTGAGATTCTCCCAAAAGCACAGGCTCACTGCAT
ATGATACCTGAAGCCTCAATTAACATTTTGTTGACTGTATATTGATGTTT
CTGTCATCAATGTCATAAATTTGTCAAATTATTAAGGTACCTGTACCTAA
ATGTTACGTTTAGTGATACATCCCTAGTATGAGGTCAACACCGACCAATG
GTTGCGCTTGCGGTAAACACGTGACAAACCCTACGTCACCGAAACTACCT
TTGAACCAGGCAGAACATCGAGTTTGATTGAAACTCCTCCATCTCGATAG
AAACGTCGGGTAGAGACCCGCTGTACAACAATTAACAGGTACAAATACTA
TCGTCTAGAATCAAGATGGCAAGTAAGATGTCGAGGGGAGATTTCGACGA
CCAGTTCCTGACGTGTCCAGTCTGTATGCTGTACTTCCGGGACCCCAGAA
TTCTGCCATGTCTGCACACATTTTGTAGGGAGTGTCTGCAAGAATGGTCA
ACTAAACAACAGCCGCTGGAATGTCCAACCTGCCGCACACAGGTCAATCT
ACCAGACCAAGGCGTGGACGGACTCAGGACCAACTTCTACGTCAACAACC
TGCTGGATTTCGCGGCCGTGAAGAAAGGGGCGGGGCCAGGTGTGCCGTGC
CAGGTGTGCGAGGGGAATGTGGAGGGGGCAAAGTCTTGGTGTGCCGATTG
CGCAACCTTAATGTGTGAGTCATGCACGGCAGTACACCGGAAACTTCCAG
CTACAAAAGACCACGAAGTTACCACCGAAGAGACACTCAAAACAGATAGA
GGTGTGAGCAAATTTCAGCGCAAACGGCACTGCCACAAACACAAGAACCA
AGAGCTGGTTTTCTACTGTGAGAGCTGTAAAGATTTGATTTGTACAGCTT
GTACCGTGGTCGACCACCGACCGGGCAAAGATCACAATCCGGTAGAAATT
GCCACTGTTGCTAAGAGCAAGAAAGAAACCCTGCAAGAGCTTCTTCGGCA
GATAGATCCGCGTCTAAATGAAATAAAGGCGTCTGTTAAGGAAGCTGAAA
AGAAGATGACAAACTTAATTCCCTTTAAAGAAGTAGCCATAAACAAAACC
AACACGTATTTCCAACAACTTATCGACCTTCTGCAAGAGCGTAGAAAGAC
GATTTTGAGCCGGATTGACGAACAATGCCGAGCCGATGGCAAGGCTCTAC
AGACAAAGAAGGAAGCAATAGAGTTTGAGTTGGCCGGACTGACGAGCGCA
CAAACGTTCTGTCAACAAGCTGTAGAACACGGAAGTGACGTGCACATTCT
GGAGGTGGGAAACCAAATCCAAACAAGGGTAGAAACTCTGCTGGCAAAGG
AACTGGACCTGGAGTCCAACTGGAGCGAGTTTCAGTTCGTAGAAAACGCA
GCTGTAACTGACTTTGCAGAAGAAATTGGGAACCTTGGTGGTTTACAGAC
GGACGTTGACGCGTCGAAGTGTAAAGTTGTTGTAAAGCCGGCAGTCCAGG
GGTTTCAATGTGTCGCCATTCTGACGACAATGAACAGAGACGGGCAGGCG
TGTGTCACAAACAGCAAAGCGATCACAGCCAACATGAAGGACCCTTCTCG
AGCAAACGTCCCGACGAAACTTGACATGAGGAGTGGAGGAGTGTGGGAAA
TATCGTACTTGCCCAAGGTTACGGGCGACCACGAGTTAGAGGTCAAGGTC
AACTCACAACATGTGTCAGGAAGTCCGTTTGGTGTTTATGTACAAACCAG
GGAGACCCCAGTGTTCACTATCGGTCGGAAGGGTAGTGGGGTGGGGGAAC
TGTACAAGCCGGTAGATGTCGTGGTTGATAGGGACGGCAACATTGCAGTG
CTGGAGTACGCGAACAAACGGGTTCAGATATTTGACACAAACAAAGGTCA
CTCTTTGAAACGTTTTCCAGTTGATGGCGAGAAACCATTCGGTATTGATG
TAGACTCGAACGGACGTTTCCTTGTGACGTCGTGGGGTGAAAATTACGGA
ACAAGACGTTATTCGAAGGAAGGCCAACTTTTGGACACATTCCAATCTGA
CAGTTTCCAAACCCCTCTTGGCCTTAAAGTTCTGAAGGACGGCCGCATGG
TGGTGGCGGGCGGCCCACAGAAACCATGTCTCCTCCTGCAGCCTGACGGG
AGCCTCATCCGGGAGATCGATAAGGGACAGTTAAAATATCCAATATGTGT
GACGGCAGATGAGTCACGTGATGTGCTGTACGTCACAGATATCAGTGCAC
ACAAGATTTGTGCGTTCGACTTTGACGGAAACCTCATGTTCGATTTTGGC
AAGCAGGGTAAAAATGAAGGAGAGGTTCAACGACCTCGCGGTGTAGCAAT
AGACCAGTTAGGTAACGTTATTGTAGGTAACGAAGGAGACGGCCGTGTAC
AGGTGTTCGGGCCCGACGGAACGTTCATACGGACTGTGGCAACAGTGAAA
GGGAATTGTGCCTGTGGAATCACACTAACTCCAGATGGTTGCGTAGCAGT
AGCATGTACGGTTGGACATTGTATAGAACTGTACAGGTACATGTAATACG
GGTGCCAACGGTCAATAATCTATAGGAGCACCTGTTATGATATGGCTTTG
GCATCTAGCCGTTCATTTATCGGTAGTCTTGTTGTCGCTCTTATTCATTT
ACTTCGCAGTAAATAATGTGTCATTTTGCTGTAGATTGGCAAAGTGCTCT
CAGTGTAATTGAACAGATCAGGAAAAGAACTTGTACTCAGAGTCCTGTCG
AGCTCATTGTAATAGGTTCATTTATTATGTAAATTAAGTCTCAATTTGCA
TAATATGTCCTTCATTATGTACTTTTCTGAATACTAAATAATAAATGTCA
TTGAAAGCCATCGTTCATTTGTTCAGTTATTCTCCTTGGAACACTTTGAC
AAAACGCCACTGCAGTTCCAGAGCAAGCAGCTAGAGGGCCCAAACCTACA
CCACTTTTTCCTTACATCACAAAATATCTGCCTCCAACAAATCAAGACCA
TAGCACGTCCAGGTCAAAAGATACAAAAAACGAATTTTCGAAACAAAACT
TAACGTTCTGCTGTAGTACCAAGGTCACGTACCAGGTGGTCCAAAATCGA
CCTTAACCTTTGTCTTCCCAACACCTAGCAACATGCTACATATCATCGTA
ATCCATCCAGAGTTTCTTCAAGTTATGCTGACTAAAATTACATACAAAAT
ATCAACAGTTCGTTCTTGAATAGCTGGTTCTCTGTGTACTATGCTGTTCA
CGCACGCACCTACTGGCCACGCTAGATAAATGGGTTTTCCCCCGCCAATA
CCTGAAGTATTAAATTAGGGGTTGCTGTAAATGTATGATGAATGAAATGA
AACTATTTTGTTTTGAGATTCTCCCAAAAGCACAGGCTCACTGCATATGA
TACCTGAAGCCTCAATTAACATTTTGTTGACTGTATATTGATGTTTCTGT
CATCAATGTCATAAATTTGTCAAATTATTAAGGTACCTGTACCTAAATGT
TACGTTTAGTGATACATCCCTAGTATGAGGTCAACACCGACCAATGGTTG
CGCTTGCGGTAAACACGTGACACTACGTACGTCACCGAAACTACCTTCCG
AGAACCAGGCAGTGTTTGATAGGAACTCCTACATCTCGATAGAAACGTCG
GGTTATGACTCGCTGAACGACAATTCACAGGTAAAAAAATACTATCGTCT
AGGTAAAAAATACTATCGTCTAGAATCAAGATGGCAAGTAAGATGTCGAG
GGAAGATTTCGACAACCAGTTCCTGACGTGCCCAGTCTGTATGCTGCACT
TCCGGGACCCCAGAATCCTGCCATGTCTGCACACATTTTGTAAGGAGTGT
CTGCAAGAATGGGTCACTAAACAACAGCCGCTGGAGTGTCCAACCTGCCG
CACACAGGTCAGTCTACCAGACCAAGGCGTGGACGGACTCAGGACCAATT
TCTACGTCAACAACCTGCTGGATTTCGCGGCCGTGAAGAAAGGGGCGGGG
CCAGGTGTGCCGTGTCAGGTGTGCGAGGGGAATGTGGAGGGGTCAAAGTC
TTGGTGTGCCGATTGCGCAACCTTAATATGTGAGTCATGCACGACAGTAC
ACCGGAAACTTCCAGCTACAAAGGACCACGAAGTTACCACCGAAGAAACT
CTTAAAGCAGATAGAGGTCTGAGCAACTTTCAGCGCAAACGGCACTGCCA
CAAACACAAGAACCAAGAGCTGGTTTTCTACTGTGAGACCTGTAAAGATT
TGATTTGTACGGCATGTACCGTGGTCGACCATCGACCGGGCAAAGATCAC
AATCCGGTGGAAATCGCCACCGTCGCTAAGAACAAGAAAGAAACCCTGCA
AGAACTTCTGAGGCAGATAGATCCGCGTCTGAAGGAAATACAGGCGTCTG
TCGAGGACGCTGAGAGGAAGATGACAAACTTAATTCCCTCCAAAGATGTA
GCCATAAACAAAACCAACACGTATTTCCAGCAACTTATCGACCTTCTGCA
AGAGCGTAAAAAGACGATTTTGAGCCGGATTGACGAACAATGCCGAGCCG
ATGGCAAGGCTCTACAGACGACGAAGGAAGCGATAGAGTTTGAGTTGGTC
GGACTGACGAGCGCACAATCGTTCTGTCAACAAGCTGTAGAACACGGAAG
TGACCTGCACATTCTGGAGGTGGGAAATCAAATCCAAACAAGGGTAGAAA
CTCTGCTGGCAAAGGAACTGGACCTGGAATCCAACTGGAGCGAGTTTAAG
TTCGTAGAAAGCACAGCTGTAACTGACTTTGCAGAAGAAATTGGAAACCT
TGGCGGTTTACAGACGGACGTTGACGTATCGAAGTGTAAAGTTGTTGTAA
AGCCGGCAGTCCAGGGGTTTCAGTGTGTCGCCATTCTGACAACAATGAAC
AGAGACGGGCAGGCATGTGTCACAAACAGCAAAGCGATCACAGCCAATAT
GCAGGACCCGTCTCGAGCAAACGTCCCGACGAAACTTGACATGAGGAGTG
GAGGAGTGTGGGAAATATCGTTCTTGCCCAAGGTTACGGGCGACCATGAG
TTAGAGGTCAAGGTCAACTCACAACATGTGTCAGGAAGTCCGTTTGGTGT
TAAGGTACAAAACAGGGAGACCCCAGTGTTTACTATCGGTCGGGAGGGTA
ATGGGGTGGGGGAACTGTACAAGCCGGCAGGTGTCGTGGTTGATAGGGAC
GGCAACATTGCAGTGCTAGAGCAGGGGAACAATCGAGTTCAGATATTTGA
CGCAAACAAAGGTCACTCTTTGAACAGTTTTCCAGTTGATGGCAAGCATC
CATACGGTATTGATGTAGACTCAAACGGACGTTTTCTTGTGACGTCGTGG
GGTGAAAATTACGGAACAAGACGTTATTCGCAGGAAGGCCAACTTTTGGA
CACATTCCAATCTGACAGTTTCCG Coding sequence (CDS) from alignment at Sc0000002:3548925..3557748- >BlTCONS00007972 ID=BlTCONS00007972|Name=BlTCONS00007972|organism=Branchiostoma lanceolatum|type=CDS|length=1692bp|location=Sequence derived from alignment at Sc0000002:3548925..3557748- (Branchiostoma lanceolatum)
ATGGCAAGCAAGATGTCGACGGAAGATTTCGACGACCAGTTTTTGACGTG
TCCTGTTTGCATGCTGCACTTCCGGGACCCCAGAATCCTGCCATGTCTGC
ACACATTTTGTAGGGAGTGTCTGCAAGAATGGGCCACTAAACAACAGCCG
CTGGAGTGTCCAACCTGCCGCACACAGGTCAGTCTACCAGACCAAGGCGT
GGACGGACTCAGGACCAACTTCTACGTCAACAACCTGCTGGATTTCGCGG
CCGTGAAGAAAGGGGCGGGGCCAGGTGTGCCGTGCCAGGTGTGCGAGGGG
AATGTGGAGGGGTCAAAGTCTTGGTGTGCCGATTGCGCTACATTAATGTG
TGAGTCATGCGCGGCAGTACACCGGAAACTTCCATCTACAAAAGACCACG
AAGTTACCACCGAAGAAACACTTAAAGCAGATAGAGGTGTGAGCAAATTT
CAGCGCAAACGGCACTGCCACAAACACAAGAACCAAGAGCTGGTTTTCTA
CTGTGAGAGCTGTAAAGATTTGATTTGTACAGCATGTACCGTGGTCGACC
ATCGACCGGGCAAAGATCACAATCCGATAGAAATCGCCACTGTTGCTAAG
AACAAGAAAGAAACCCTGCAAGAACTTCTTCGGCAGATAGATCCGCGTCT
GAGGGAAATAAAGGCGTCTGTTAAGGAAGCTGAGAAGAAGATGACAAACT
TAATTCCCTCCAAAGAAGTAGCCATAAACAAAACCAACACGTATTTCCAC
CGACTTATCGACCTTCTGCAAGAGCGTAGAAAGACGATTTTGAGCCAGAT
TGACGAACAGTGCCGAGCCGATGGCAAGGCTCTGCAGACCAAGAAGGAAG
CAATAGAGTTTGAGTTGGCCGGACTGACGAGCGCACAAACGTTCTGTCAA
CAAGCTGTGGAACACGGAAGTGACGTGCACATTCTGGAGGTGGGAAATCA
AGTTCAAACAAGGGTAGAAACTCTGCTGGCAAAGGAACTGGACCTGGAGT
CCAACTGGAGCGAGTTTCAGTTCGTAGAAAACACAGCTGTAACTGACTTT
GCAGAAGAAATTGGGAACCTTGGTGGTTTACAGACGGACGTTGACGCGTC
GAAGTGTAAAGTTGTTGTAAAGCCGGCAGTCCAGGGGTTTCAATGTGTCG
CCATTCTGACGACAATGAACAGAGACGGGCAGGCATGTGTCACAAACAGC
AAAGCGATCACAGCCAATATGCAGGACCCGTCTCGAGCAAACGTCCCGAC
GAAACTTGACATGAGGAGTGGAGGAGTGTGGGAAATATCGTTCTTGCCCA
AGGTTACGGGCGACCATGAGTTAGAGGTCAAGGTCAACTCACAACATGTG
TCAGGAAGTCCGTTTGGTGTTAAGGTACAAAACAGGGAGACCCCAGTGTT
TACTATCGGTCGGGAGGGTAATGGGGTGGGGGAACTGTACAAGCCGGCAG
GTGTCGTGGTTGATAGGGACGGCAACATTGCAGTGCTAGAGCAGGGGAAC
AATCGAGTTCAGATATTTGACGCAAACAAAGGTCACTCTTTGAACAGTTT
TCCAGTTGATGGCAAGCATCCATACGGTATTGATGTAGACTCAAACGGAC
GTTTTCTTGTGACGTCGTGGGGTGAAAATTACGGAACAAGACGTTATTCG
CAGGAAGGCCAACTTTTGGACACATTCCAATCTGACAGTTTC
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00007972-exon-Sc0000002-1564993656:3556520..3557748 | BlTCONS00007972-exon-Sc0000002-1564993656:3556520..3557748 | Branchiostoma lanceolatum | exon |
| BlTCONS00007972-exon-Sc0000002-1564993656:3548925..3549436 | BlTCONS00007972-exon-Sc0000002-1564993656:3548925..3549436 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000002 | genome | Sc0000002:3548925..3557748 - |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF003968 |
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