XLOC_042004 (gene) - C. hemisphaerica

Overview
NameXLOC_042004
Unique NameXLOC_042004
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_466:473322..481276-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_042004 ID=XLOC_042004|Name=XLOC_042004|organism=Clytia hemisphaerica|type=gene|length=7955bp|location=Sequence derived from alignment at scaffold_466:473322..481276- (Clytia hemisphaerica)
AAATACCTGACTCAAAATCATTTGGTATTGTTTCATTTCAGCGATAAAAA AAGAACAGAAAAACAAGAAATTATTTAAAAAAACAGCTACAATGGCCAGC ATCAATTGTGACAACATCGTTCCGAACGAAGAGCGAAATGGAAAATTAGT TCCGTTCGATTTCCATGAAAATGAATGTGACGTCATTATTAAGACAAAAG ACAAAGAAGTTCAGTTGCCATCCAGTTTCTTAGAAATGGTATCTAGTCCA ATGGATTTCAATAACAACGTAAATAATCTTTTCGACGTTGATGTTTGTGC TGAAAGTGTAACCAAAGCGTTGTCATTTTATCACCCTAAGGATTGGACCA ACAAAATTGACTGTAAGTTTCGACTCTTTTCGCATTTTGTAAGTATCAAT CAAAAGCCATACCGTATTGCTTTGAATAAACGCCCCGGGTGTGTTTAAAG GTGGCGTTCATCGAAAATCTTTCCTTAAATTAGTAGCTACAAGATAGGCC GATTCGCGAAATTCTATCCACTCGAAAAATTTTGATCTTCGATTCGCGAA AAAAAGTCCACGTGAAAATTAAAGATCAGCGACTTTAAGGTAGTACCAAG AAGGCTATTTTAGTTTAAAGCTATAGAAGGTGCCAAGAGATTCTCATATT TTTATTTCTCATACAAATATGTTTTAATACTTTGGATTTTTTGTATTTTT AGGTTCGGAGTTGGATGATTTACTCTTAGTTACAAATACGCTTAAGCTAA AATCATTCAAATTACATTTAATCGAACATATGAAGACAGAATACGTATCA AAGTCAAAGCAATTTGATGAGAATTTACTGCAAGTTTTTCATGCTGCTCA AAAGTATGAATTGACTACATTAATTGAAACAATTAGATTAAGGTCTCTGC GCATCTTAGATTTGGCTAGAAGCCAACGTACATTATACCTCGCTGGAGAA AATATATCGATGTGAAATTTTAGAGACCTCTGTATATGAACATGTCAATA TCAACAATGATCCGGAGTTGCTTGCAATATTTCACCTCTTCAAATTAATT ATTCACAAATTTCAAAACCCCGACTTGGCTTCTAAAACAGATTTCTTAAC CCACCAGATTCATGAGCACTTTATTGATTATGAGTCAATTTCCTACAAAA AGGGTTTTCCAAATTGTGTCGTCTTGGACGTTGAGAACAAAGAAATTCAT GTCAGTTCGTATTTACTCATAAACAACTCTCCTGTATTCAAAGCAATGTT GAGTTCGACAAATTTCAAAGAAGGTCAAAACAGAAGGATTGAACTTCCTG GCAAGAAATTCAATGAAGTTGTCTACTTCCTTCAATTTCTACACACACTT CAAGATATTAAAGGTATTTTTGTGTACAATACTCTTGAAGTAACTTATCG TTTTTTGAACATTTCCCGACCTTTTTTCGACCTTCACAAACAAATTACTT CTATAGTGTCTTTTCTAATCATCAATGAATTTAGATTTTCAAAATTTCCT TCTTGTTTTTTACTGTCCGAATTTTCCTACCCATTTGTAGATGACACTAA TATTTGGGCTCTGGCACCTTTGTGTCAAGAATATCAAGTGGATTGGCTCT CCAACAAAATACAGTCCTTCATACGAAATTGTGCTAGAAANATACCTCGC TGGAGAAAATATATCGATGTGAAATTTTAGAGACCTCTGTATATGAACAT GTCAATATCAACAATGATCCGGAGTTGCTTGCAATATTTCACCTCTTCAA ATTAATTATTCACAAATTTCAAAACCCCGACTTGGCTTCTAAAACAGATT TCTTAACCCACCAGATTCATGAGCACTTTATTGATTATGAGTCAATTTCC TACAAAAAGGGTTTTCCAAATTGTGTCGTCTTGGACGTTGAGAACAAAGA AATTCATGTCAGTTCGTATTTACTCATAAACAACTCTCCTGTATTCAAAG CAATGTTGAGTTCGACAAATTTCAAAGAAGGTCAAAACAGAAGGATTGAA CTTCCTGGCAAGAAATTCAATGAAGTTGTCTACTTCCTTCAATTTCTACA CACACTTCAAGATATTAAAGGTATTTTTGTGTACAATACTCTTGAAGTAA CTTATCGTTTTTTGAACATTTCCCGACCTTTTTTCGACCTTCACAAACAA ATTACTTCTATAGTGTCTTTTCTAATCATCAATGAATTTAGATTTTCAAA ATTTCCTTCTTGTTTTTTACTGTCCGAATTTTCCTACCCATTTGTAGATG ACACTAATATTTGGGCTCTGGCACCTTTGTGTCAAGAATATCAAGTGGAT TGGCTCTCCAACAAAATAGAGTCCTTCATACGAAATTGTGCTACAAACAG AACAAAGACAATTCTCAACTATTTAGTGTTAGCTGAAGATATGCATTTTG GTATTGAAGTAGAAAGGAGTTTGGTTTCTAAACTCTTAAGAGGGTTCCAA AATATCAGTATGTGCTTGGAATTTCTCCTACTCAGCCGTCGAATGCAAGT TTGGATTGCAAGAAGAAAATTAGCTGATTCTTTGAAGAAGTTTCTGATTG ATCCGTACTTTGATACTCTTCCCAGGTATGGCAAGCAAACAACCCGAGAG AAAAAAGAGGCTGGGATAAAGAAATATAAAGCAGTTGATGCTGACGTTGT TTCCATATTTCATGATCTAGATCAACCCAAAATGGAGCTTATAAATGCAT AATGGCATACATAATCACAATTTTTTGTTTGTGCCAGATTCTATTATATT AACTAAAAGTTCTGTTTTATTTACCATGCATTGGGCTTTTCCAGAAAAAA ACCGCACACCCCCTGTTGAGGAGGTCTATCCCTTTATGGCTGGAAATGCT GTAAACCCCCTGGAATTCCAGGAAATTTTAGATTTAAACCCCTCTGAAAT TCTTAAATTTAGTAGGATTTAAAAAGCTACCACATGGAATTCCAGTTATT TTTGACAGATTTTTGTATCTCCCTATGGAATTCCACCACATATATCAAAC CTTACCCCCTTGGAACGAAAGTGGACCTCCTCAACAGGGGTTTTTTTTCT GGAAAAACCCATTCTTAAAATGATTCTGTCCCTTTTTTTGAAAATACTTT TTATTAAATCATTGTGATCATTTTTTAAATAAAAAACTTATTGCCTCATT TCTTGCCTTTTTTGGACATTTTTTAAAATTGATGTTTTTGTTTTTTGTCC ATAACTTCTGAACTAATAAAGCAAATTTCAAAAATAATACACCAAAGTTT AAGTTAGGCTTTCCTTTAAACAATTCAAAAAAAAAAAATGTAACTTCTTT GTGGCACACCCGGTATCTCTTATATGTTATTTATTTATGTATAAGAAGTG GTTTATTTGAAAATGATAAGAGTTTAAATGTACAACATATGTATTAATTA AGTATAAATCTTGTTAAGAAATTCTAATCACTAATCAATCGAAACTGAAA GCCCCATTATTGAAAGCCAGTAAATTCTCTTGTGCTTATTTTGATCAACT TGTTATGCTACAATCAGTTCTGAAGGTGTATTTTTCAAGGCTTACTGCCA ACATACTATTGCACTGATTTTAACTCTTGTCAAGATTTGTTGTATTTGGC TCTATCTTATTCCATCTTCAAGGGACCAAGAAACTTTGAAATATAGAACA AAATCTGATAAAATAGGAGAGTTTTTAAGCCAAATGTCCAGTTGATTTGA CCTATATTTTAGTTTGAATTGCAGAAATAAAATTATAAGATAAAAGATTT AGAACATAATTTATGACCTGGCAACATTTAGCATTTATTTTTTTAAAGAG GAGATTTGTTGTGATTAAAACAATTATATTAGATTCAAAGATTTATTTTT ACGCTTTTTTATAAGAACAATTTTGTAAGAGCCATGGTGCTCAAAATCGC CAAAAAATAAAAACAATTTAGGAACAACGCTAAGCCNTTTAAACAATTCA AAAAAAATGTAACTTCTTTGTGGCACACCCGGTATCTCTTATGTTATTTA TTCATGTATAAGAAGTGGTTTATTTGAAAATGATAAGAGTTTAAATGTAC AACATATGTATTAATTAAGTATAAATCTTGTTAAGAAATTCTAATCACTA ATCAATCGAAACTGAAAGCCCCATTATTGAAAGCCAGTAAATTCTCTTGT GCTTATTTTGATCAACTTNGGAAACTGAAAGCCCTATTATTGAAAGCCAG TAAATTCTCTTGTGCTTATTTTGATCAACTTGTTATGCTACAATCAGTTC TGAAGGTGTATTTTTTTCAAGGTTTACTGCCAACATACTATTGCACTGAT TTTAACTCTTGTCAAGATTTGTTGTATTTGGCTCTATCTTATTCTATCTT CAAGGGACCAAGAAATTTCTTTGAAATATAGAAAAAAAACTGATAAAAAA GGAGAGTTTTTAAGCCAAATGTCCTGTTGATTTGACCTATATTTTAGTTT GAATTGCAGAAATAAAATTATAAGATATAATATTTAGAACATAATTTATG ACCTGGCAACATTTAGCATTTATTTTTTTAAAGAGGAGATTGGTTGTGAT TAAAACGATTATATTAGATTCAAAGATTTATTTTTACGCTTTTTTATAAG AACAATTTTGTAAGAGCCATGGTGCTCAAAATCGCCAAAAAATAAGAACA ATTTAGGAACAACGCTAAGCCTGAAATTACTAAATTTCAAGCAATTTAGG GGTAAAAGTAGTAAAAATTGAGTATAACACCTAAAATTATTCAATTAACC CTATAAATGTTATGGACGCCAGCAAGTTTTCCATTCCCTTTCTAGCAATG TAACACTGTTCTTGAATAGTATTTTCTAATTTTATTTTAACATCATCACT ATCTAAAACATTTTCCGGATTTGCCGTTTTATTTTTGAAAATAATTTTAG TTTGAAGATTGTAAATGTCTCGTGTGAACTTACAAGAAAGTTCAGTGGTT GTTAGCGCTCCACTTGATTGCAGGATGTGTGAATTAGCAACTCATACTAG TAAATTTTGAAAGAATTCTGTTCGTATTGATATAGAATATGTTTTATGTT TAAATTCCTCGTATAGCGGGGCATGCTTACTCATGGCCACACCTGATACC AGACTTTGTTCTTCATCTATCCGCACTCCATTTATTTCTCGGCTTTCTTT TATTCACGTACCGGTTTTCTTTATGCTAAGTTTGATTTTTGTCAGTTGTC AAAAAAGAAAATCATAAACGGTCCGTTTCTCCCATTTTTAGCAATGCTTT TAGATAATATTCGCAGAATGTCTGTAATTAGTATAAGACCGATCTGTCTG AAATTAAAATTTGATTTTGAGCACTTGATTTTGATTTTTTCGTTTTGTGA TTCCTTTTTTGAACACCCTGGAACATCTACCTGTGCTTTAGAAAGGCATT AGAAATCTAGAATCTCCTTGACTGATATATCACTCAATTTTCTCTCAAAC TGGGTACTTTAAGGGCAGAAAGTTTTTTATTAATGGAAACAACTTTCACG AATGGTTAGGGAAAATTTCTAAAGATTTTGTTCAATCCAAGTAGAAATAC CTGACTCAAAATCATTTGGTATTGTTTCATTTCAGCGATAAAAAAAGAAC AGAAAAACAAGAAATTATTTGAAAAAACAGCTACAATGGCCAGCATCAAT GGTGACAACATCGTTCCAAACGAAGAACAAAATGAAAAATTGGTTCCGTT CGATTTCCATGAAAATGAATGTGACGTCATTATTAAGACAAAAGACAAAG AAGTTCATTTGCCATCCAGTTTCTTAGAAATGGTATCTAGTCCAATGGAT TTCAATAACAACGAAAAAAATGTTTTCGACGTCGATGTTTGTGCAGAAAG TGTAACCAAAGCGTTGTCATTTTATCACCCTAAGGATTGGACCAACGAAA TTAAATGTAACTTTCAACTCTTTTCACATTTTGAAAGTATCAATCAAAGG TCAATACCATATTGCTTTGGTGAGAGGGGAGGGGGTTCATAAAATTTCCT CCAAGAGGGCTTTTAAAAGCGTGTCAACACATAAGCCTATCATCCCTATC CCAACATGCGTGTTTTGCTTTTGTGAATTAAAGTGGTGGGATTGAAGAGG CCCCCAGTGGACTTTCAATCACGCAATCACGCAAATTTTTTCCCCAAATT CACGCTTTCACGCAATGTTTTTTCACAGCTCACGCAATTTTTGTTCACGC AAAGCTTTCCAATTCATGCATTCACGCAATTTTTTTTTAATTTTCACGCA TTCGCGCAAGTGAAAAAGCCCATTCACACAAACCGCTAGGGGGCATTGAA ACCACCATCTCTCCGACCAGGAAGAGATGCCTTATGGATAAAAAATTTGT CGGTGAATCAAACATCAATTTAATTCCTTTTGTCTTTTTTTAGGTTCAGA GTTGGATGATTTACACTTAGTTGCCAATACGCTTAAGCTTAAATTATTCA AATTACATTTAATCGAACGTATGAAAACAAAATGCAAAGCAACCAGTCAA TTTAATGATGCAAATCATTTTAACGCAAGTTTTCTTCAAATTTTCCATGT TGCTCAAAAGTATGGATTGACTTCAATAATCAAAGCTATTAGATCAAGAC ATCTATATATTACCGATTACAATTTCAAGCTTTTCGACGACCTTCATTTC ACCGCTTTGGAGAAGAGATATCGATGTGAAATTTTACAGACCTCTGTAAT GAAGTACCCACTGAATCAAAATAGTGGCCTATCCGAAAGTACGAAAACAG AGTTAAGTTCAATATTTCACCTTTTCAAATTGTTANCAAAATAGTAGCCT ATCCGAAAGTACGAAAACAGAGTTAAGTTCAATATTTCACCTTTTCAAAT TGATAATCCACAAATTTCAAAGAGTAGACTTATCCTCTAAAACAGATTTT TTAACTCAGGAAATTCCTGAGCATTTAATTGACCCGGAATCTATTTCCTA CAAAAGAGGTTCTCCAGATTGTGTTGTCTTGGACGTTGAGAACAAAGAAA TTCATGTCAGTTCGTATTTACTCATAAACAACTCTCCTGTATTCAAAGCA ATGCTTCAGTCGACAAATTTCAAAGAAGGTCAAAACAGAAGGATTGAACT TCCTGGCAAGAAATTCAATGAAGTTGTCTACTTCCTTCAACACCTGCATT CGCTCCAAGATATCAACGGTACACATCTTTTTATAAGCAACCTCAATTTT CGGCCCAGGGCTAAGGATTTTTCGGATTTCAGCCAAAGGTTTTGGCTTTT TATCTCATTTAATGTTCACAAAATGGACCCACTTTGAAGGACAACTTTTT CGAAAAAGGTTTGAAGCCTTGAAATAATCTGCTCAGAATTAACTTTCCAA TGAGTTTATATATGTTCATTATATCTTTTTGCCTTAGAAAGCAATTTATG GAAACTTGGGCAATGACATTTTTTTGAAACAGACTTCAATTCCTTTTTAG ATGATACCAATATTTGGGCACTCGCTCATTTTTGTCAAGAATATCAAGTT GATTGGCTATCCGACAAAATCAAATCCTTTATACAAGGTTTCCTTTTCAA ATGACACGACGTCGATTCTCAATTATTTGGTGCTTGCTGAGGAGATGAAT TTCGGTCACGAGATAGAAGAATTTCTAGTCCACAAGCTGACGGGACTATT CCAAAATATCAGCATGTGTTTGGAATTTCTATTACTAAGTCATCGAATGC AGGTTTTAATCGCAAGAAGAAAATTAATTAATTGAAAGTTGAAAGGGCTT TGGGTTAATGTCTATAAAAATAACAAGCACTTCAAATCTAAGCTGGAAGC AGGAATAAAGAATTGCAAAGCAGTCGATGTAGAGGTTGTTTCCATATTCA ACGATCTAGATCAACCTAACATTCCAGATCAACCTAACATTCCTGTTCAA ACTTATTCGTTTGCTCAATTTCGAAGACCCCTCATATTGTAACCTTGATG GGGGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00067243TCONS_00067243Clytia hemisphaericatranscript
TCONS_00067242TCONS_00067242Clytia hemisphaericatranscript
TCONS_00067241TCONS_00067241Clytia hemisphaericatranscript
TCONS_00067240TCONS_00067240Clytia hemisphaericatranscript
TCONS_00067239TCONS_00067239Clytia hemisphaericatranscript
TCONS_00067238TCONS_00067238Clytia hemisphaericatranscript
TCONS_00067237TCONS_00067237Clytia hemisphaericatranscript
TCONS_00067236TCONS_00067236Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00067242-proteinTCONS_00067242-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_466supercontigscaffold_466:473322..481276 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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min expression (4.49 tpm) - - (18.26 tpm) max expressionaGrOo_1GrOo_2FGOo_1FGOo_2EG_1EG_2P1_1P1_2P2_1P2_2P3_1P3_2PoPr_1PoPr_2St_1St_2GO_1GO_2PH_1PH_2BMF_1BMF_2MMF_1MMF_2M_1M_2GEC_1GEC_2GEN_1GEN_2
Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
10.52 11.01 7.12 5.59 11.97 10.24 11.98 13.25 6.61 5.53 8.26 4.95 7.91 7.09 10.6 11.47 11.23 11.73 7.68 7.15 11.04 10.29 18.26 13.56 10.13 12.62 5.84 4.49 11.22 12.04