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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00067237 ID=TCONS_00067237|Name=TCONS_00067237|organism=Clytia hemisphaerica|type=transcript|length=1637bp
CCTGACTCAAAATCATTTGGTATTGTTTCATTTCAGcgataaaaaaagaa
cagaaaaacaagaaattatttaaaaaaacagcTACAATGGCCAGCATCAA
TTGTGACAACATCGTTCCGAACGAAGAGCGAAATGGAAAATTAGTTCCGT
TCGATTTCCATGAAAATGAATGTGACGTCATTATTAAGACAAAAGACAAA
GAAGTTCAGTTGCCATCCAGTTTCTTAGAAATGGTATCTAGTCCAATGGA
TTTCAATAACAACGTAAATAATCTTTTCGACGTTGATGTTTGTGCTGAAA
GTGTAACCAAAGCGTTGTCATTTTATCACCCTAAGGATTGGACCAACAAA
ATTGACTgtTCAGAGTTGGATGATTTACACTTAGTTGCCAATACGCTTAA
GCTTAAATTATTCAAATTACATTTAATCGAACGTATGAAAACAAAATGCA
AAGCAACCAGTCAATTTAATGATGCAAATCATTTTAACGcaagttttctt
caaattttccatGTTGCTCAAAAGTATGGATTGACTTCAATAATCAAAGC
TATTAGATCAAGACATCTATATATTACCGATTACAATTTCAAGCTTTTCG
ACGACCTTCATTTCACCGCTTTGGAGAAGAGATATCGATGTGAAATTTTA
CAGACCTCTGTAATGAAGTACCCACTGAATCAAAATAGTGGCCTATCCGA
AAGTACGAAAACAGAGTTAAGTTCAATATTTCACCTTTTCAAATTGTTAN
CAAAATAGTAGCCTATCCGAAAGTACGAAAACAGAGTTAAGTTCAATATT
TCACCTTTTCAAATTGATAATCCACAAATTTCAAAGAGTAGACTTATCCT
CTAAAACAGATTTTTTAACTCAGGAAATTCCTGAGCATTTAATTGACCCG
GAATCTATTTCCTACAAAAGAGGTTCTCCAGATTGTGTTGTCTTGGACGT
TgagaacaaagaaattcatgTCAGTTCGTATTTACTCATAAACAACTCTC
CTGTATTCAAAGCAATGCTTCAGTCGACAAATTTCAAAGAAGGTCAAAAC
AGAAGGATTGAACTTCCTGGCAAGAAATTCAATGAAGTTGTCTACTTCCT
TCAACACCTGCATTCGCTCCAAGATATCAACGATGATACCAATATTTGGG
CACTCGCTCATTTTTGTCAAGAATATCAAGTTGATTGGCTATCCGACAAA
ATCAAATCCTTTATACAAGGTTTCCTTTTCAAATGACACGACGTCGATTC
TCAATTATTTGGTGCTTGCTGAGGAGATGAATTTCGGTCACGAGATAGAA
GAATTTCTAGTCCACAAGCTGACGGGACTATTCCAAAATATCAGCATGTG
TTTGGAATTTCTATTACTAAGTCATCGAATGCAGGTTTTAATCgcaagaa
gaaaattaattaattgaaaGTTGAAAGGGCTTTGGGTTAATGTCTATAAA
AATAACAAGCACTTCAAATCTAAGCTGGAAGCAGGAATAAAGAATTGCAA
AGCAGTCGATGTAGAGGTTGTTTCCATATTCAACGATCTAGATCAACCTA
ACATTCCAGATCAACCTAACATTCCTGTTCAAACTTATTCGTTTGCTCAA
TTTCGAAGACCCCTCATATTGTAACCTTGATGGGGGG Run BLAST on NCBI transcript from alignment at scaffold_466:473322..481271- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00067237 ID=TCONS_00067237|Name=TCONS_00067237|organism=Clytia hemisphaerica|type=transcript|length=7950bp|location=Sequence derived from alignment at scaffold_466:473322..481271- (Clytia hemisphaerica)
CCTGACTCAAAATCATTTGGTATTGTTTCATTTCAGCGATAAAAAAAGAA
CAGAAAAACAAGAAATTATTTAAAAAAACAGCTACAATGGCCAGCATCAA
TTGTGACAACATCGTTCCGAACGAAGAGCGAAATGGAAAATTAGTTCCGT
TCGATTTCCATGAAAATGAATGTGACGTCATTATTAAGACAAAAGACAAA
GAAGTTCAGTTGCCATCCAGTTTCTTAGAAATGGTATCTAGTCCAATGGA
TTTCAATAACAACGTAAATAATCTTTTCGACGTTGATGTTTGTGCTGAAA
GTGTAACCAAAGCGTTGTCATTTTATCACCCTAAGGATTGGACCAACAAA
ATTGACTGTAAGTTTCGACTCTTTTCGCATTTTGTAAGTATCAATCAAAA
GCCATACCGTATTGCTTTGAATAAACGCCCCGGGTGTGTTTAAAGGTGGC
GTTCATCGAAAATCTTTCCTTAAATTAGTAGCTACAAGATAGGCCGATTC
GCGAAATTCTATCCACTCGAAAAATTTTGATCTTCGATTCGCGAAAAAAA
GTCCACGTGAAAATTAAAGATCAGCGACTTTAAGGTAGTACCAAGAAGGC
TATTTTAGTTTAAAGCTATAGAAGGTGCCAAGAGATTCTCATATTTTTAT
TTCTCATACAAATATGTTTTAATACTTTGGATTTTTTGTATTTTTAGGTT
CGGAGTTGGATGATTTACTCTTAGTTACAAATACGCTTAAGCTAAAATCA
TTCAAATTACATTTAATCGAACATATGAAGACAGAATACGTATCAAAGTC
AAAGCAATTTGATGAGAATTTACTGCAAGTTTTTCATGCTGCTCAAAAGT
ATGAATTGACTACATTAATTGAAACAATTAGATTAAGGTCTCTGCGCATC
TTAGATTTGGCTAGAAGCCAACGTACATTATACCTCGCTGGAGAAAATAT
ATCGATGTGAAATTTTAGAGACCTCTGTATATGAACATGTCAATATCAAC
AATGATCCGGAGTTGCTTGCAATATTTCACCTCTTCAAATTAATTATTCA
CAAATTTCAAAACCCCGACTTGGCTTCTAAAACAGATTTCTTAACCCACC
AGATTCATGAGCACTTTATTGATTATGAGTCAATTTCCTACAAAAAGGGT
TTTCCAAATTGTGTCGTCTTGGACGTTGAGAACAAAGAAATTCATGTCAG
TTCGTATTTACTCATAAACAACTCTCCTGTATTCAAAGCAATGTTGAGTT
CGACAAATTTCAAAGAAGGTCAAAACAGAAGGATTGAACTTCCTGGCAAG
AAATTCAATGAAGTTGTCTACTTCCTTCAATTTCTACACACACTTCAAGA
TATTAAAGGTATTTTTGTGTACAATACTCTTGAAGTAACTTATCGTTTTT
TGAACATTTCCCGACCTTTTTTCGACCTTCACAAACAAATTACTTCTATA
GTGTCTTTTCTAATCATCAATGAATTTAGATTTTCAAAATTTCCTTCTTG
TTTTTTACTGTCCGAATTTTCCTACCCATTTGTAGATGACACTAATATTT
GGGCTCTGGCACCTTTGTGTCAAGAATATCAAGTGGATTGGCTCTCCAAC
AAAATACAGTCCTTCATACGAAATTGTGCTAGAAANATACCTCGCTGGAG
AAAATATATCGATGTGAAATTTTAGAGACCTCTGTATATGAACATGTCAA
TATCAACAATGATCCGGAGTTGCTTGCAATATTTCACCTCTTCAAATTAA
TTATTCACAAATTTCAAAACCCCGACTTGGCTTCTAAAACAGATTTCTTA
ACCCACCAGATTCATGAGCACTTTATTGATTATGAGTCAATTTCCTACAA
AAAGGGTTTTCCAAATTGTGTCGTCTTGGACGTTGAGAACAAAGAAATTC
ATGTCAGTTCGTATTTACTCATAAACAACTCTCCTGTATTCAAAGCAATG
TTGAGTTCGACAAATTTCAAAGAAGGTCAAAACAGAAGGATTGAACTTCC
TGGCAAGAAATTCAATGAAGTTGTCTACTTCCTTCAATTTCTACACACAC
TTCAAGATATTAAAGGTATTTTTGTGTACAATACTCTTGAAGTAACTTAT
CGTTTTTTGAACATTTCCCGACCTTTTTTCGACCTTCACAAACAAATTAC
TTCTATAGTGTCTTTTCTAATCATCAATGAATTTAGATTTTCAAAATTTC
CTTCTTGTTTTTTACTGTCCGAATTTTCCTACCCATTTGTAGATGACACT
AATATTTGGGCTCTGGCACCTTTGTGTCAAGAATATCAAGTGGATTGGCT
CTCCAACAAAATAGAGTCCTTCATACGAAATTGTGCTACAAACAGAACAA
AGACAATTCTCAACTATTTAGTGTTAGCTGAAGATATGCATTTTGGTATT
GAAGTAGAAAGGAGTTTGGTTTCTAAACTCTTAAGAGGGTTCCAAAATAT
CAGTATGTGCTTGGAATTTCTCCTACTCAGCCGTCGAATGCAAGTTTGGA
TTGCAAGAAGAAAATTAGCTGATTCTTTGAAGAAGTTTCTGATTGATCCG
TACTTTGATACTCTTCCCAGGTATGGCAAGCAAACAACCCGAGAGAAAAA
AGAGGCTGGGATAAAGAAATATAAAGCAGTTGATGCTGACGTTGTTTCCA
TATTTCATGATCTAGATCAACCCAAAATGGAGCTTATAAATGCATAATGG
CATACATAATCACAATTTTTTGTTTGTGCCAGATTCTATTATATTAACTA
AAAGTTCTGTTTTATTTACCATGCATTGGGCTTTTCCAGAAAAAAACCGC
ACACCCCCTGTTGAGGAGGTCTATCCCTTTATGGCTGGAAATGCTGTAAA
CCCCCTGGAATTCCAGGAAATTTTAGATTTAAACCCCTCTGAAATTCTTA
AATTTAGTAGGATTTAAAAAGCTACCACATGGAATTCCAGTTATTTTTGA
CAGATTTTTGTATCTCCCTATGGAATTCCACCACATATATCAAACCTTAC
CCCCTTGGAACGAAAGTGGACCTCCTCAACAGGGGTTTTTTTTCTGGAAA
AACCCATTCTTAAAATGATTCTGTCCCTTTTTTTGAAAATACTTTTTATT
AAATCATTGTGATCATTTTTTAAATAAAAAACTTATTGCCTCATTTCTTG
CCTTTTTTGGACATTTTTTAAAATTGATGTTTTTGTTTTTTGTCCATAAC
TTCTGAACTAATAAAGCAAATTTCAAAAATAATACACCAAAGTTTAAGTT
AGGCTTTCCTTTAAACAATTCAAAAAAAAAAAATGTAACTTCTTTGTGGC
ACACCCGGTATCTCTTATATGTTATTTATTTATGTATAAGAAGTGGTTTA
TTTGAAAATGATAAGAGTTTAAATGTACAACATATGTATTAATTAAGTAT
AAATCTTGTTAAGAAATTCTAATCACTAATCAATCGAAACTGAAAGCCCC
ATTATTGAAAGCCAGTAAATTCTCTTGTGCTTATTTTGATCAACTTGTTA
TGCTACAATCAGTTCTGAAGGTGTATTTTTCAAGGCTTACTGCCAACATA
CTATTGCACTGATTTTAACTCTTGTCAAGATTTGTTGTATTTGGCTCTAT
CTTATTCCATCTTCAAGGGACCAAGAAACTTTGAAATATAGAACAAAATC
TGATAAAATAGGAGAGTTTTTAAGCCAAATGTCCAGTTGATTTGACCTAT
ATTTTAGTTTGAATTGCAGAAATAAAATTATAAGATAAAAGATTTAGAAC
ATAATTTATGACCTGGCAACATTTAGCATTTATTTTTTTAAAGAGGAGAT
TTGTTGTGATTAAAACAATTATATTAGATTCAAAGATTTATTTTTACGCT
TTTTTATAAGAACAATTTTGTAAGAGCCATGGTGCTCAAAATCGCCAAAA
AATAAAAACAATTTAGGAACAACGCTAAGCCNTTTAAACAATTCAAAAAA
AATGTAACTTCTTTGTGGCACACCCGGTATCTCTTATGTTATTTATTCAT
GTATAAGAAGTGGTTTATTTGAAAATGATAAGAGTTTAAATGTACAACAT
ATGTATTAATTAAGTATAAATCTTGTTAAGAAATTCTAATCACTAATCAA
TCGAAACTGAAAGCCCCATTATTGAAAGCCAGTAAATTCTCTTGTGCTTA
TTTTGATCAACTTNGGAAACTGAAAGCCCTATTATTGAAAGCCAGTAAAT
TCTCTTGTGCTTATTTTGATCAACTTGTTATGCTACAATCAGTTCTGAAG
GTGTATTTTTTTCAAGGTTTACTGCCAACATACTATTGCACTGATTTTAA
CTCTTGTCAAGATTTGTTGTATTTGGCTCTATCTTATTCTATCTTCAAGG
GACCAAGAAATTTCTTTGAAATATAGAAAAAAAACTGATAAAAAAGGAGA
GTTTTTAAGCCAAATGTCCTGTTGATTTGACCTATATTTTAGTTTGAATT
GCAGAAATAAAATTATAAGATATAATATTTAGAACATAATTTATGACCTG
GCAACATTTAGCATTTATTTTTTTAAAGAGGAGATTGGTTGTGATTAAAA
CGATTATATTAGATTCAAAGATTTATTTTTACGCTTTTTTATAAGAACAA
TTTTGTAAGAGCCATGGTGCTCAAAATCGCCAAAAAATAAGAACAATTTA
GGAACAACGCTAAGCCTGAAATTACTAAATTTCAAGCAATTTAGGGGTAA
AAGTAGTAAAAATTGAGTATAACACCTAAAATTATTCAATTAACCCTATA
AATGTTATGGACGCCAGCAAGTTTTCCATTCCCTTTCTAGCAATGTAACA
CTGTTCTTGAATAGTATTTTCTAATTTTATTTTAACATCATCACTATCTA
AAACATTTTCCGGATTTGCCGTTTTATTTTTGAAAATAATTTTAGTTTGA
AGATTGTAAATGTCTCGTGTGAACTTACAAGAAAGTTCAGTGGTTGTTAG
CGCTCCACTTGATTGCAGGATGTGTGAATTAGCAACTCATACTAGTAAAT
TTTGAAAGAATTCTGTTCGTATTGATATAGAATATGTTTTATGTTTAAAT
TCCTCGTATAGCGGGGCATGCTTACTCATGGCCACACCTGATACCAGACT
TTGTTCTTCATCTATCCGCACTCCATTTATTTCTCGGCTTTCTTTTATTC
ACGTACCGGTTTTCTTTATGCTAAGTTTGATTTTTGTCAGTTGTCAAAAA
AGAAAATCATAAACGGTCCGTTTCTCCCATTTTTAGCAATGCTTTTAGAT
AATATTCGCAGAATGTCTGTAATTAGTATAAGACCGATCTGTCTGAAATT
AAAATTTGATTTTGAGCACTTGATTTTGATTTTTTCGTTTTGTGATTCCT
TTTTTGAACACCCTGGAACATCTACCTGTGCTTTAGAAAGGCATTAGAAA
TCTAGAATCTCCTTGACTGATATATCACTCAATTTTCTCTCAAACTGGGT
ACTTTAAGGGCAGAAAGTTTTTTATTAATGGAAACAACTTTCACGAATGG
TTAGGGAAAATTTCTAAAGATTTTGTTCAATCCAAGTAGAAATACCTGAC
TCAAAATCATTTGGTATTGTTTCATTTCAGCGATAAAAAAAGAACAGAAA
AACAAGAAATTATTTGAAAAAACAGCTACAATGGCCAGCATCAATGGTGA
CAACATCGTTCCAAACGAAGAACAAAATGAAAAATTGGTTCCGTTCGATT
TCCATGAAAATGAATGTGACGTCATTATTAAGACAAAAGACAAAGAAGTT
CATTTGCCATCCAGTTTCTTAGAAATGGTATCTAGTCCAATGGATTTCAA
TAACAACGAAAAAAATGTTTTCGACGTCGATGTTTGTGCAGAAAGTGTAA
CCAAAGCGTTGTCATTTTATCACCCTAAGGATTGGACCAACGAAATTAAA
TGTAACTTTCAACTCTTTTCACATTTTGAAAGTATCAATCAAAGGTCAAT
ACCATATTGCTTTGGTGAGAGGGGAGGGGGTTCATAAAATTTCCTCCAAG
AGGGCTTTTAAAAGCGTGTCAACACATAAGCCTATCATCCCTATCCCAAC
ATGCGTGTTTTGCTTTTGTGAATTAAAGTGGTGGGATTGAAGAGGCCCCC
AGTGGACTTTCAATCACGCAATCACGCAAATTTTTTCCCCAAATTCACGC
TTTCACGCAATGTTTTTTCACAGCTCACGCAATTTTTGTTCACGCAAAGC
TTTCCAATTCATGCATTCACGCAATTTTTTTTTAATTTTCACGCATTCGC
GCAAGTGAAAAAGCCCATTCACACAAACCGCTAGGGGGCATTGAAACCAC
CATCTCTCCGACCAGGAAGAGATGCCTTATGGATAAAAAATTTGTCGGTG
AATCAAACATCAATTTAATTCCTTTTGTCTTTTTTTAGGTTCAGAGTTGG
ATGATTTACACTTAGTTGCCAATACGCTTAAGCTTAAATTATTCAAATTA
CATTTAATCGAACGTATGAAAACAAAATGCAAAGCAACCAGTCAATTTAA
TGATGCAAATCATTTTAACGCAAGTTTTCTTCAAATTTTCCATGTTGCTC
AAAAGTATGGATTGACTTCAATAATCAAAGCTATTAGATCAAGACATCTA
TATATTACCGATTACAATTTCAAGCTTTTCGACGACCTTCATTTCACCGC
TTTGGAGAAGAGATATCGATGTGAAATTTTACAGACCTCTGTAATGAAGT
ACCCACTGAATCAAAATAGTGGCCTATCCGAAAGTACGAAAACAGAGTTA
AGTTCAATATTTCACCTTTTCAAATTGTTANCAAAATAGTAGCCTATCCG
AAAGTACGAAAACAGAGTTAAGTTCAATATTTCACCTTTTCAAATTGATA
ATCCACAAATTTCAAAGAGTAGACTTATCCTCTAAAACAGATTTTTTAAC
TCAGGAAATTCCTGAGCATTTAATTGACCCGGAATCTATTTCCTACAAAA
GAGGTTCTCCAGATTGTGTTGTCTTGGACGTTGAGAACAAAGAAATTCAT
GTCAGTTCGTATTTACTCATAAACAACTCTCCTGTATTCAAAGCAATGCT
TCAGTCGACAAATTTCAAAGAAGGTCAAAACAGAAGGATTGAACTTCCTG
GCAAGAAATTCAATGAAGTTGTCTACTTCCTTCAACACCTGCATTCGCTC
CAAGATATCAACGGTACACATCTTTTTATAAGCAACCTCAATTTTCGGCC
CAGGGCTAAGGATTTTTCGGATTTCAGCCAAAGGTTTTGGCTTTTTATCT
CATTTAATGTTCACAAAATGGACCCACTTTGAAGGACAACTTTTTCGAAA
AAGGTTTGAAGCCTTGAAATAATCTGCTCAGAATTAACTTTCCAATGAGT
TTATATATGTTCATTATATCTTTTTGCCTTAGAAAGCAATTTATGGAAAC
TTGGGCAATGACATTTTTTTGAAACAGACTTCAATTCCTTTTTAGATGAT
ACCAATATTTGGGCACTCGCTCATTTTTGTCAAGAATATCAAGTTGATTG
GCTATCCGACAAAATCAAATCCTTTATACAAGGTTTCCTTTTCAAATGAC
ACGACGTCGATTCTCAATTATTTGGTGCTTGCTGAGGAGATGAATTTCGG
TCACGAGATAGAAGAATTTCTAGTCCACAAGCTGACGGGACTATTCCAAA
ATATCAGCATGTGTTTGGAATTTCTATTACTAAGTCATCGAATGCAGGTT
TTAATCGCAAGAAGAAAATTAATTAATTGAAAGTTGAAAGGGCTTTGGGT
TAATGTCTATAAAAATAACAAGCACTTCAAATCTAAGCTGGAAGCAGGAA
TAAAGAATTGCAAAGCAGTCGATGTAGAGGTTGTTTCCATATTCAACGAT
CTAGATCAACCTAACATTCCAGATCAACCTAACATTCCTGTTCAAACTTA
TTCGTTTGCTCAATTTCGAAGACCCCTCATATTGTAACCTTGATGGGGGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00067237-exon-scaffold_466-1575043694:480915..481271 | TCONS_00067237-exon-scaffold_466-1575043694:480915..481271 | Clytia hemisphaerica | exon |
| TCONS_00067237-exon-scaffold_466-1575043694:474109..474883 | TCONS_00067237-exon-scaffold_466-1575043694:474109..474883 | Clytia hemisphaerica | exon |
| TCONS_00067237-exon-scaffold_466-1575043694:473322..473826 | TCONS_00067237-exon-scaffold_466-1575043694:473322..473826 | Clytia hemisphaerica | exon |
| TCONS_00067237-exon-scaffold_466-1510915933:480915..481271 | TCONS_00067237-exon-scaffold_466-1510915933:480915..481271 | Clytia hemisphaerica | exon |
| TCONS_00067237-exon-scaffold_466-1510915933:474109..474883 | TCONS_00067237-exon-scaffold_466-1510915933:474109..474883 | Clytia hemisphaerica | exon |
| TCONS_00067237-exon-scaffold_466-1510915933:473322..473826 | TCONS_00067237-exon-scaffold_466-1510915933:473322..473826 | Clytia hemisphaerica | exon |
| TCONS_00067237-exon-scaffold_466-1491911889:480915..481271 | TCONS_00067237-exon-scaffold_466-1491911889:480915..481271 | Clytia hemisphaerica | exon |
| TCONS_00067237-exon-scaffold_466-1491911889:474109..474883 | TCONS_00067237-exon-scaffold_466-1491911889:474109..474883 | Clytia hemisphaerica | exon |
| TCONS_00067237-exon-scaffold_466-1491911889:473322..473826 | TCONS_00067237-exon-scaffold_466-1491911889:473322..473826 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_466 | supercontig | scaffold_466:473322..481271 - |
Blast
The following BLAST results are available for this feature:
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