XLOC_041845 (gene) - C. hemisphaerica

Overview
NameXLOC_041845
Unique NameXLOC_041845
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_462:242567..248075-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_041845 ID=XLOC_041845|Name=XLOC_041845|organism=Clytia hemisphaerica|type=gene|length=5509bp|location=Sequence derived from alignment at scaffold_462:242567..248075- (Clytia hemisphaerica)
AAAAAAAATAGATGTTTATATCAACTCATTTAGTAAAGCCAGACAGATTT
TCAGTGATTTTTTGATATTGTGATTAGCTTGGTAGTTTCATTTTAAGGGT
TTTTCTTTATAGAAACAGATCACTTTGGTATTGGAAGTTTATCAGCTTGA
ATCACGCGATTTATGTTTGGCTAACGCGTTTCGAGCCTTTCGAGAGAGAT
TCTTCTCTCACTATCTAATTTTTGGTTTTCCTTTCGCCAGAAATGACGTT
ATTGCTGTGAGCAATTAACAGTTGAATTTGCTGCTCATAATAACAGTTTA
AAAAACAGGAAATCAATGTTGTGTTAACATGCTGGCTTGAGCTTTCACTT
TTGTAGAAAATTTTAACTGGACGTGACGTGGTCGTGCTGTAGTTAGGTTT
TTTTACTTCATTATACTTTTACTTTTATTTATTTTAGGTTTAGATTACAT
AGAGTCACTGATACGTGATATCATTTGAATGTTGGTTTGGATGATGTTTT
CAAATCATAATTGTTTAACTTGAAAGATTTTACTTCCTCCTAGATTGATC
GTTATTTACTGGAACAAGAGGAAAGATTGTTAAATGTTCCAGTCATTATC
ATAGAAAATACAAGAAAATATTAGACTTAGGCAATAACAAGCATAAACTG
GGCAGACTGAACACTTAAGAACAATGACTTTGCAAATGAAGAACAGAAGA
ATTTTGTGCGTCTATGCTTTTGTTTCTTTCCACGTATTGGGAAGCATAAA
CGGTAACTTTATCATTGAGAGAAAAATTGGCGACTCGGATGAGATTATAT
TACTGGACAAAAACAAAGATCCGTTAGATATTCTTGCAGGTGGCACTTTT
AAGGATCACCGCACCTGTAGGGCTGATACTAACAAGGGTAATATTCGAAG
GAACATTGGTTTATCATCACAAGACCCTGGCAAAAAGATTAGTTGCTATA
CTGAAGGTGAATTACAATCAGGTAAGACTTAAAAATATGGTTTGAGAAAA
TGAAATGAAAGTAGTGGTTAGTAGAACTCCTTTAATGTATCAAATTAGTT
ATTAAAGGTCACGGAAAAAACTCTAGCCTGAGTAAAGTGTATTCTAGCGG
TAAGGACTGTTGTAGCCTGGTCACTATGAGGTAAACAATGTAAGTGATGC
ATTTTCTAGAATTGTGTAAACTATCATTTTGCAAGTGACCCCTTTTAAAA
TCCATCAAGTGACTTAATGATTACGATGGGAGTGACTTTATTTCTTAATA
AGAATCCCATGATATAGTTGTGGTATACCGAGAATCCTTAGCTTTTAAGT
CAACTGAAGCATACAGTATATGCCATAGGCTTCTGCTCATACTCCGATGA
AAGTTCCTTATAGGAAGTACATCAATAGAGGTCTGCGAATCAAACTAATT
AAAACCATATTCAATAAATCTTCAGAATGTGGAAGCACTAATGGGAACGA
ATTCAGAACCATTCCCAAACACATTACTCAAATCCCTACGAGATGTTCAA
GCGCTGGATGGGAAAATATAAAAATATGGGGTTTCAAAGAGCGTGATAGA
CTCGGTTGGCAGGAATTAAGTAATGGAGAGAAAAGAAACATTAGATTGTC
CAGCAGAGCGTTAGTAAGTATCATGAATGAGTTTGATTACTTTGATTTTA
CGCTTAATCTTTCTGAAATTATCACCAGTCTGGAATCAGTCTATTTGCTT
TAGGCAAGCATTCATTTTAGCGAATGTAGTACAAAGGTAGAGCCTTCTAC
TATGGTATGCAAGGTCGTGGGTTCAATCCCGCCCGAGTCATATCAAAAAC
TTCGTAGTAGTACAAAATGGTACTTGATGCTTTGTGTTATACAATTAAAG
AGAAGGATCAAGGGTGAGTGGAGCATTTCATGGAGAAAGAGTAGCGCCCT
CTCCTACCTTCGGGGAAAATTCGACAATAAAGGTTTATTATATAACCATT
GAAAAAAGAAATTATTTGGTAAAACGCCTTATAATACCATTCTTTACAGA
ATTTCGATAATCGAAGAAAATTGGATGGACTTTTAGGAGTTATCACGTAC
ACATGTCCAAATGGAAATGTTTACTGTGATGTTCTTAAGTTTGCTGGAGC
GGCTAAATGTAAGTGGGAAAACTTTTCTTTAACGTCATCAATTGGAAGAG
TGCTTTTTAAAGCTCAGGTTTAATCAAAATTTATTTTGAAATACAACTTT
ATTGAATTCGCTCTACGAAGAGTATTGAGCACTCTTTTAATAGTTGTTCA
ACAAAAACATTATTGTTTTCGCCTCAAAAATGGCGTGATATGTTGGGAAT
TAACACCACGGTTATTACAAGTCGCCTCCATTCTAGATAGGTAAAAGTCT
ACTAATTCTCTTAGCAAAGCGTCTACCACAAGCAAAGTGTTGAGTCTCTC
TATACCTCGAACCCGCACGGAAAACACAAAATTGTTTGAATTAAGGTTCA
AAAGGTGTTGTTAATTGGAGGGACAAGAAAACTTGTCCGAGTTAAGGAAA
CATTCGATTTATAGAGGTTCAATTTCTTTTAAAATGTTCTATAGATCCTC
TACCATACGCCAGTTCAATAGACGACCTGGTGAAAAATCTTAAGCAAATC
GACGATGGATACCCAATAGGAGCAACACCACCCACACCAGGGAGAAACAC
AAGATCACCAGTAACAAGAGATGACGAATCTTCAAATAACAGTGGTCTCA
TTATTGGCATCGTATTTGGTATATTTGTTGTCATCTTTGCAATGGTTCTG
GCATTCTTCTTGTATAGGAGGTAAAAAAATCTTACACAATCAAATATAAA
CACTTACAATGTCACAAAAGTTGCCAAAAGGCGTACTGATCCCCATTTCT
CGAAGCTGAGAATAAACTGGAGCCCAACCCTTACAATCCTTACTTTCAGC
AAAAAGTTGACACTTAGAGAGACATTCGATTTAGAAGATGAAAAACCAGA
CCCTTTAAGCACGCACATAACCAGCACCAATTTGTGCCTAAGTATCCCCC
CCCCCTTCGGGGGTTATTAGCGAGTTTATGTATTTGCATTTTTGAGGACG
CGGTAAAGTGACTGAAGCGATCTGGAAAAACCCACAGTTCTGACCAGCAA
AATCGAGGACGGTAAAAGTGCTGATTTACCGTCGTCCTCACTTAGTCAGG
ATCTAGTCAAGTTAGAACCTTATCGTCTCCGTCGCAGAAAAACACACATG
CATAAACTCGGTATTGAAAAGGTGCCTTTCATGCATGAATCACAGTATTA
TTTTCTTTTTCTTCAAGACGTAAAAGAAGCCGCCGAGCCAAGAAACAAAC
GCTCTCACCCGTATACGCNAAAAAAATCTTACACAGTCAAATACAAACAC
TTGCAATGTCACAAAAGTTGCCAAAAGGCGTACTGATTCCCCATTTCTCG
AAGCTGAGAATAAACTGGAGCCAAACCCTTACAATCCTTACTTTCAGCAA
AAGGTTGACCCTTAGAGAGACATTCGATTTAGAAGATGAAAAACCAGACC
CTTTAAGCACGCACATGACCAGCACCAATTTGTGCCTAAGTATCCCCCTT
CGGGGGTTATTAGCGAGTTTATGTATTTGCATTTTTGAGGACGCGGTAAA
GTGACTGAAGCGATCTGAAAAAACCCGCAGTTCTGACCAGCAAAATCGAG
GACGGTAAAAGTGCTGATTTACCGTCGTCCTCACTTAGTCAGGATCTAGT
CAAGTTAGAACCTTATCGTCTCCGTCGCAGAAAAACACACATGCATAAAC
TCGGTATTGAAAAGGTGCCTTTCATGCATGAATCACAGTATTATTTTCTT
TTTCTTCAAGACGTAAAAGAAGCCGCCGAGCCAAGAAACAAACGCTCTCA
CCCGTATACGCAAAATGTGAAGTCGACATCAACTCAACAAATGGAGAAGA
AGAAAGCAAACTCATACACCAGTATACCGACTCCAATGCATACGCTTTAC
CGTCAAACCCACAACCTGAGTACCGTGAAATCGAACCTGAAATTCGCTAT
TCACCTAGAAATAATCATGTTTCCATGGAGACTCCGAAACAAAACAACAG
CCATTATGTGTCAGCGACTTCTACACAAACCAATAGCAAGCAAAAGGGAC
TTGAAGCTGAGTACCAGACCCCTGATATAGTGCCATCACCACAAAATAGA
ATCACATCTGAGATAAGCATAACAAAAGACAATATTACCGATGAAGCACT
AGATTATAGCGTTCCTGATAAAACTGGAAAGTCAAAATCTAAAAACAATA
CTAAAAATGATACGCCTTACAAAGAACATTCTGTAGGATATAGCGTTCCT
GATAAAACTGGAGACTCGGAATGGAAAGACTATACTGAAAACGTGAAAGA
ATCTTCGCCAGAATATAGTGTTCCAGGATCATCGGTAGATCATGTAGACA
GTGGAGCTGCCGATGACGAAACAACACCTTTAAAGGGGTATAGTGAGCCG
GGACAAATAATAGATAATGGTAAAAGTGATAATGATAATGATGATGACGA
TGACGAAGTTAATTATTACAGTACACCAGTAACCAGTGAAACGGATGCAT
TGGTGAGACCGAATTCAGCATTGTACGCTAAAGTGAATAAAAATACGAAG
AGATAGGGGACTTTGAGAAAGTTAAGCTTGAATATCAAAGTATGTAAATT
TTAAAGCTTTGCATTGGCTTCAAAAGGAAATTTTGAAGAAATTTAAAATA
CCTTCTTCTCATAGAGCATTTAATGACATTTGTTAACCGGTTACTTCTTC
AAAGCAGGCTACACGGCTATTTGCGCAATGCAATTGGTTCTTTTCGCGTG
ACGACGGGCCTACATTGCCCAGAGTTGCCCGTCGTTAGGAAAATTCGTTG
ACATCAATGCGTTGACATCATGTCTCTCAATTTTTATTTCTGACGTCAGA
AATTATAAAAATTTTTGATCTCTTTTCGCTTGTATTTTTCACTTTAGTTC
GCTATTTTTCCTGAATAAAGCGCTAAAAATCAATCGAAGCTGAAGGAAAC
GGTTAATAAATACAATAATGACCGGTTTTTTCGGCTGTACTGAAAATATT
GCCCTCGGTCGACGCAACAACCTCGCAAGCTCGGTCATTACTTGACCTCG
GGCAATATTTCTCAGTACAGCCCTTACTAACCAGTCTTTATTGTATTAGT
GTAATATATGTATACAAAATGATGTAAGATAAAAGTTTGCGTTGGCTTCG
AAAGGAAAATTTCAAGAAATTTTTATAAAATACTTTTCCAAAAAAAATTA
ACAAAGAAAAGCAAGAAAAACCACATAAGATTTAATTCAATTTTACTACT
ACTATATTGAGTTTCAAATTGCACATAACCTCCTGCTCTCTTAGAATCAC
TTTTAAGTAATTTACAACAATATCCCGGGGGAGGGGACGTGTCACTGGTC
AGAGTTCCTTTTTTAGGCTCTGAAGATATCTGACAGGGTTCCAGATAGAT
TTCCAAAATATGTATCCGACAGGGGCGACTATTGGGAATTTTTGAAAATT
CATAGGGTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00066969TCONS_00066969Clytia hemisphaericatranscript
TCONS_00066968TCONS_00066968Clytia hemisphaericatranscript
TCONS_00066967TCONS_00066967Clytia hemisphaericatranscript
TCONS_00066966TCONS_00066966Clytia hemisphaericatranscript
TCONS_00066965TCONS_00066965Clytia hemisphaericatranscript
TCONS_00066964TCONS_00066964Clytia hemisphaericatranscript
TCONS_00066963TCONS_00066963Clytia hemisphaericatranscript
TCONS_00066962TCONS_00066962Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00066966-proteinTCONS_00066966-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_462supercontigscaffold_462:242567..248075 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.07	0.07	0.28	0.33	9.98	7.97	8.8	7.7	3.82	6.83	2.1	2.05	11.61	8.53	5.13	7.36	9.07	12.61	20.14	20.84	7.89	8.47	7.56	9.42	8.89	6.63	50.34	35.89	35.1	37.39