XLOC_006375 (gene) - C. hemisphaerica

Overview
NameXLOC_006375
Unique NameXLOC_006375
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000127:18849..22627-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_006375 ID=XLOC_006375|Name=XLOC_006375|organism=Clytia hemisphaerica|type=gene|length=3779bp|location=Sequence derived from alignment at sc0000127:18849..22627- (Clytia hemisphaerica)
TAATTATGTTATCCTGATCAAGAATCTGTCTATTTTTTGATGATTGACAC
ATAGATGGGTGTAGCTCAGAATCGACCAAGAAGAATAAGGGAAAAAAGAA
TTAGGAACAAGGTAATCCACTTTAATTCTTCTCTTTTTTTTCAAATACAG
ATGAACAAATGAACAATTGGTTAGTGTAATTTAACAAAATTAAGAAATGT
TGCCTTGTGAGAAAGCTGATAACCCCCCATGATAAAGCTCTCATATTATT
TAATTAGTATTCTAATTTTGTTTCTATTCATACAGCGTCGATCGGTTTGT
AAGTATCTCTCGTTTTTTTTGTTTTTTAGATATCAATCCTTTAAGGCAAT
GTTTTTAAGGTATGATTATCCACATAAATTTTCTCAACGTTTTCATGAAG
GTTTATTATTACATTCTGCCTGAACAGTTTTCTCCGAAAGTAGTCGATGC
AATCTTTGAGAAAAGTTTTCTGCATGATTTTCTGTATTAAATCTTTCCCG
AAAAACAGTTATCTCCGTTGATGTTTCGTTTTGGAAAACGATCGCATTTC
AAGTATTTTGGCAATTGAAAACCAAACTCTTCCATCAGCTGACTGCAACC
ATTTGTAGCGTCCTTACAATACTCTCGACAAGGTGGCAAAACTTTGTTCA
GTTCACATTTTGGGAAATAATATGAACAAATGAAATTTTGCATTTGATCT
GAGCAGCCTGCTTTGAACAGAGGTTCATAAAGTTGAACTTCAAGAATTGA
ATTTTTGACATAGCTGATTGATGACTTTTCAATGGAAGTATATTTGTAGG
GTAGTTTATTGCAAACATTTGATGATTTCCTTATGAGTTCTTGACATTGA
TTTGGTTTGGTTGCCATTTCCGATGTCTTTGGTTTTAGGGAAGTTGAAAA
AATCGGTAAGTTTGTTGTTATTCGAGTCATTTTTGTTGTCATTTGAGTTG
CTTTTGTTGTCCTTGGTTCTCCACCTAAATCATGAATGAAAATAAAAGAA
ATAAAATGTGTTATATTGAGTTTTTTGAAAGGTGTTCGCCTGCTACTACG
ACGATTTTGATTTTAAGTTTAAGTCTGTTCCAAAAAAAAATAGCAGTCCC
ACATTTTGATAAATTGCCCTTGAAGGATAGAAGGACATAATTAAAAGTAA
TACCATGTTGAAAAGATTTTAATCTTAATCTTCTTAATTTCCATTTTGCT
AATTTTACCCTAACCTACTTTGGAGAGGTGCAACTTTCGCTCCAAGAAAG
ATATGAAAAACCTGAAAACATATTGAAATCAGCGAAGTTCCAAGTTTTCA
GAAAAGTATAAATTCAAAAACTTTCGTTCTGTAGAAAAGATCTTGATTTT
TTTTCATCTTTATTTCCGAAAAAGTTTGAAAGTCTTAAAATCCTCCGCTT
GACTATCTTTTCAACATTTTGATTGTATCTTTTCTTCTTAGAGAGGAATG
TATCAAAATGTGCAAACTGCCAATTTTTTAAGGAACAGACTTTAGGCTGT
AATTTTGTACATTGAGAATTCACAAAATTTACTTTTCAAAATTTATGAAT
TTACCAGCAAAGCAGTTATTTTCATTGATATCTTTTTTCGGGAATCGATC
ACACTTCAATTCTTCTGGCAGCTGAAAACCATACTTTTGCATCAAAAGAC
TGCAACCATTTCTAGAAGTCTCGCAAAGCTCTCGACAAGGTGGCAAAACT
TTGTTCAGTTCACATTTTGGGAAATAATATGAACAAATGAAATTTTGCAT
TTGATCTGAGCAGCCTGTTTTGAACAGAGGTTCATAAAGTTGAACTTCAA
GAAAACTTTTGGCGTAATAAGGTGACTTTCCAATGGAAGTATATTTGTAG
GGCAGTTTATTGCAAAAATTTGATGATTCATGAGTCCTTATGAGTTCTTG
ACATTGATTTGGTTTGGATGCCATTTCTGATGTCTTTGGTTTTTGGGAGG
CTGAAGAATTCGGTAATTTTGTTGTCATCTGAGTCCTTTTTGTTGTCTTT
TGAGTTGCTTTTTGTTTGTTTGTTCTTGGTTCTTCACCTGAATTTTGCAA
TGAAAAAAATTGAAAAAAAAATTCTAAGAAATCACCGTTGCTAAGAAGAA
TAACTTTTTTACGACCTCATGACGTCTAAAACCGTCCGAAATATTTATCT
GGGTTAACCCTTTGCGTTACAAGTTTTGTATAGTGTGGAAGCGCTTTAAA
GATTATATTTTTAACTTTATTGTAGATTAAATCTTATAACTTACCTAAGA
TTCGAGAAGAAAACTTATGAATGAAAAAAAGAAAAAGAAATGTACGGTCT
TCTTTGTAGTGCTCTTATATAAAACCCTTTTTATTTGCATTCCTTTAAAA
CTCAAACTTACCGGAAAAGCAGTTATTTTCATTGATAACTTTTTTCGGGA
ATCGATCACACTTCAATTGATCTGGCCACTGAAAACCATACTTTTGCATC
AACAGACTACAACCATTTCTAGAAGCTTCACAAAGCTCTCGACAAGGTGG
CAAAACTTTGTTCAGTTCACATTTTGGGAAATGATAAGAACAAATAAAGT
TTTGTAAATGATCAGAGCATCTGACTGCATATAATGGGTTGAACATTTCA
ATCATCCTCTTTGCACCACTTATCGCCTTTAACTTATCGATTGACGTATA
GCTGTACGGGAGCTGCTGGCAAATCCTTTTATTTCTCAAAACTTCTCTAA
CTAAGTTGCATGTTTTGTTTGGTTTTATTATCGAGGGGCGAATCTTTTGT
ATTTCTTCCCCATCAGTCATGAAACAGTTATCTTTATTTTCATTTTGTAC
AGGATAATGATGACAATTGAGTTTCTCCGGCCAGCTGAATCCAAATCTCG
CTACTGTATCTTTGCAACCGTTTCTGGCAGCCTCACAAACCTTTCGGCAT
GGAGGTAAAACAAGTCCGGATTCACATTTCGGGTAATGCACCGAACACAC
AAATAACTCAAGATGTTTTGAACATCTTTGAAAGAAAGGGATGTACCGTA
CCACTTTACTTCCAACGGAATTAAGTGTAGTCTTTTTCATCTTTAATGTC
CTGTCATATGGTAGAACTTTACAGTATTTCCCCTTAAAAGGTACAGGCTG
CTTCTCAAATGCTATACATTCACCTTTAACTGGTAGCTTTGGTGTTAAGG
TAGGCTTTGGAGGTACTTTTTTCTTAACCATAAAGCAATTGTTTCCTTCT
TGATTTCTCTTAGGAAAGTGCCTACATCGGAGGTGGCGTGGCCATTGGAA
TCCAAATTTGTTCATTAACTCTTTACAACCCTTTCTAGCTTCCTTACAAA
GGCTTCGGCACGGAGGTAAGGGTTTATTTGCTTCACACTTTGGCAAATAA
TAGGAACAAATGAAATCTTGAATATGCTCGGAACATTCGACCTTGAACAG
TGGTTCGAATTGGTTTCCTACCAGATTTGCTTCCTCTATCTCAGATTTGG
TCTTCATAATTGTGTAGTTGTAGGGTCGATTTCTACAAAATCCTTTCATT
ATTATTTTATTGTCAGCGATAGACATACATTTTGATTTTTCTGCTGTTTG
TGATGCTGTTGTTTTCATGTTCGACTGTCGTACCGGCTCTTGTTTTACCG
TGGTAGGAAATGATTTAGGTGTTGTCGTCGTAGGAATACTTGATCTTTCG
GGAGCTGGTGCTACCGTGGCTAGAAAGAAGTGAGAATTACGTTTGAGAAT
TAAATTATTTTAACTGGCTTAGCTTGACCACAATCTATAGTCTAATTCTT
TTCCCTAGAGTATTTAGTGTTGATGTTTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00011372TCONS_00011372Clytia hemisphaericatranscript
TCONS_00011371TCONS_00011371Clytia hemisphaericatranscript
TCONS_00011370TCONS_00011370Clytia hemisphaericatranscript
TCONS_00011369TCONS_00011369Clytia hemisphaericatranscript
TCONS_00011368TCONS_00011368Clytia hemisphaericatranscript
TCONS_00011367TCONS_00011367Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000127supercontigsc0000127:18849..22627 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.07	1.11	0.3	0.56	7.28	5.76	4.86	8.09	4.41	11.2	23.41	18.89	3.07	8.42	1.45	1.45	6.5	2.71	5.52	10.56	5.13	4.39	2.39	2.09	4.47	3.16	0.33	1.26	3.4	5.34