XLOC_000465 (gene) - C. hemisphaerica

Overview
NameXLOC_000465
Unique NameXLOC_000465
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000005:1362307..1368218+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000465 ID=XLOC_000465|Name=XLOC_000465|organism=Clytia hemisphaerica|type=gene|length=5912bp|location=Sequence derived from alignment at sc0000005:1362307..1368218+ (Clytia hemisphaerica)
gtattttaatgaccagccgggcctttcatttgagggctatgcatgttagc ctccactgatgcaagttaccctttttcacggtatgattgataaacttggt ggagttatcaaaacaaatttgtcattaaaaagattttaacagtaagtgaa aatacagaccagatatcaaccagtcccttGTTAccaccaatcgtcccaag ttagagcagttgacggttcCTCTCTTACAACAGTCTTAACTTGACATCTT GAGGTTGTAAacattttatttaataaaaattttctggaCTTGCACATGGT TTTTTCTtgctgtttgtttttattttgttggtgAAATCAGGTGAAATATA GTTATTTAAAAGACTGTtgttgacatccctcatctGATTCTGACACCGTT TTTAAGAGATTGTAAAATAAGAAGATCCTAATAAATGCACATATACTGCA AAAAATTCCAACTTTTCTAGATAAAATATTAGAGgggtttttgtggtaaa aaatgccttttatatttattttgcaCGAATTTATGCTGAGTTTGGGGAGA TTCCtaattttcattcaatctttaaagattttgtgcTTACCTGGCTGTTC AAAAAAAGTCTTTCTCATTTTCTAAAGTTCTCATAttaaaaattttagtt tatataCACAGTGACTTATTATATACAAATGAAAAAGTTGTTTAAAGGGG AATGTAATTCATTAAACCCTTACTTAGGTTcaatttcaattctgtttttt AGGGTAACTGACAAAACTGATAATTCTGAGAAACAAGAAAAACTTAAACG TGACCCTCCTGCGGCAAGGGTGAGATAATAAAATGGAAAAGCAATGCGTT CCTGATAAAGAGCTACCTGAATGGGCAAAGCCAAAGCCCAAGGGTGCACC ACCATCTCAGGTTACACCTTTAATTTTGCATCTGTGTTATTTTCTGTGAG aactttttttaattacaaattgattttcacaaatataaaataaaaaaggt aaTTGTGTAAGCTTGCCAATCATGTCTTTGTATTCATGTCAATTTGTTGT CAGTTTCGGCTATACAATGATTTTGTAATGTTTACTGTACTCAACTTTCT ATTTATTGACAATCTAGGTGAAGAAGAATTTGCTGTCGTCAGCAATCCAA TCAGCTTTCATCATTGGCTCCTTTCTATTGGCTTTTGCATCCTTGAGAAA TTCTTTAACATGGTATATTtcattttaatcaaaataattcTTCTGAACGA TATTTTGCAGTAAAACATTTTTAACTATACTTACAGCtgtaatatttttc aataatgGTGAGACTTTGCTGATATCCTTTATGACCCCTTGCTCCTACAT AAATTTATGTTATATATTTTCCACGAGAGAATCTTTTGGCACAGGTActg caaaattttatcaatGTTGATCCTGGATGGGGAAATGATCATAATGATAT TATCCAAGCGAACGTAGATCTTTAAACACATACCATAAGAAGGCTTTAAA TTTGTCTTTTAGCTTTTAAGAGAGCTTTAAAAGATTTTACTTTGTGTACA GAAGTAGCGAATATTCTTCTTGATAGGTAAGAttcttcatttttgtaatt ttactatttttgtattttcattacaGGAAATTTGAAGAACTTTGGGGAgg ctcaaaaacattttatcaAGATGTTTGGACATACTTTTATCGtgatattt tcaaaggaaatcgATTGCTTCTCTCAACGTTTGGTAAGTTTAATAATAAA TAAGAGAAGAATAGAAAACTATCCAAATGTTTTCGAAAAGTTTTACGTTC tagaattttgaaagaatgcTTTTTTTAATACAATTCATTGAACATCAGGA AGTGTTGTTTTCCTTCATAAAAGGTCAAGTTATAAATTTATAAACGAGGT ATCATGAAGGAGCAGTTTAATTGCAAGATAATCAATAAGTTATACCACCT ACTGTTCAATAAACAGAAAGGTCTTTAAATGCTAATTGCACCATTTCGAC ACTTTGCTATGGAGATAAActattaaaaattaaacaagcCTTTTCTTGTA TATTCACTAGGCGTAATAATTAATGCCGTTTTCGTTAGCTTTAACGCGGA AGGCAATTGACTGATTCCCATATGTTATGTTTTATTCAGGAAGTTCTTCA AAGTGTACACTTTGAAGTTAAAAATGAATTCTCAAATTTGTCTTTTAACT CTCAGAAAACGTTGATTCATTATAGCATAGGAAAAAATATCAGCTAgaca actttcaaaactacaCATTATTTTTCCGACAATACCGGATGTTTCATGTT CACAATACGTAAAACTTTGACATCACATAATAAGATAATGTTATCGTTAT CGATCTCCTTGCTGTTTTGCccgaaaataacaaaaacatgaCATTATCAa tcaggggataaaaatataaaaatatacaaatataCAGCCGAGCATCAAAA TGTCTcgtgcttataaaaagagtGTATTCAGACAACACCACAACATATAC ATATTTTAGAATCTGGTCTTGCTTatcattctagctcattttatgaaaat tttgctttgatatTGTACCATCATGCTGATTGCGTCAAGGGCTATTATCT GTCATaattagattatctaaaaagcttaattctttacgagatagtgaaaa ttttttggtaaatttaaggGCTCGAGTTTTAGCAagctggttgcttataa aaaatatacagCTAACATTGTCATTTCCATATTCCTATTTTAATTGCACA GGTGTACATGCGATCATTTTCGCTTGGTTTTGGCTTAACTCaatcttctt cttcattctGGATGTTTTCGAACCGAAGTTCTTCATGAAATACAAAATCC AAGAAGATAAGAAACCTACACGTGCTCAAATGCTAAAAGCAATCCGAGTT GTCATGTTCAATCAATTGGTCGGATTGATTTTCAGTTTTCCAATCTATTA TTTTGTCGCAAAACGTGGTATGACTTATGATGCTGAAGATTTACCAACTT TCCAATGGTTTTTGGTTGAaatgtttgtttatatttgggTTGAAGAATTT GGATTCTATTATTCGCATCGGTGAGTAGTTTTTCGTTTAAGGAGCCCCCC CCCAGTGGCatccctaatcacgccatcacgcaaaaaaaatttctccatca cgcatcacgaaaatcgctaaaatttgtcatcaNCCTACACGTGCTCAAAT GCTAAAAGCAATCCGAGTTGTCATGTTCAATCAATTGGTCGGATTGATTT TCAGTTTTCCAATCTATTATTTTGTCGCAAAACGTGGTATGACTTATGAT GCTGAAGATTTACCAACTTTCCAATGGTTTTTGGTTGAaatgtttgttta tatttgggTTGAAGAATTTGGATTCTATTATTCGCATCGGTGAGTAGTTT TTCGTTTAAGgaggcccccccccagcggtatccctaatcacgccatcacg caacacgaaaatcgctaaaatttgtcatcacgcaaaaaatagcgaaaaat agcccaaatcacgcatcacgcctcaaatatttgccctatcacgcatcacg caaaaatcttgatcacgtcatcgcgccaaaaaaaatctctagtcacgcca tcacgcaagaaaaaagttccaatcacgccatcacgcaaaccgctgggttT AAGAGATGTATCAAGTATGGATAACATTCTCCAGATGCAAGAAATAAGAA CTCGTTGTTATCATTTTAACAAAGCTTGTTGTTAGATgaaattttaactt tattttttttaatctcgCTAAATTCTCTTACCTTTCTAAAAACTAACATT TACTAACATTTACCCCACTAGTGCTAAATTTATGAAGAAATCCCATGGAA ATGGCAGTTCTTTTCATCAATTTCCCAAATTAAAGGCTTGTAAGGCTAGG CACTACATCTTTCTCCTCTCGATTTATGATGGTTTGAATTTAAGACGAGT TGGACATTCTTACCTTATTTTGTAGCCTTGGACACCACCCACGCCTTTAT AAACACATCCACAAGATTCACCACGAATGGACTGCACCAATCTCAATCAT TGGAATCTACAATCACTGGCTAGAACATATCGTTTCCAACATCTTGCCCG TCACTCTCGGCCCCCTGATCATGGGCTCTCATATGGGGTCGCTGGTGATG TGGACCTGCATTGCGATCACTTCAACACAAATTTCACACGGGGGTTACCA TTTACCGTTATTGCCTTCACCCGAAGCACACGATTATCACCATTTGAAGT gagttaaaagaaaaaattttttttaacaaaaacaacGCCCAAACATAAGT TTTGTATATTTAAAATCTAGTCCCTTACTGTATTCTTCATCGATATGTCA TTTTAGCCAATTACTAAACATGTAGGGATTTTTCCAAGCACCAAGCAATG CCTCCGTTTTTactttcaaattgaatttttaacaaagTCTAACGGGGGCA TTTGGGTGCTTGGAAAAAACACTGACATGATATTTGGTCCTGTCGTGGAG TTTCTTTATGTTAGCTACCCTGCTCTATTTCCTTTTCCATTGTCAGAGAT GAATAATATAGGAAGGGTTGGGTTGAATTGCTGATTTAAGCCTTGGCTAG AAAATTTTATGAACAACCAGGTATTCCGAACTTTCTGTCTCTAATAGTCA ATAACAAATGAATAATAACCGCTTGTTGTATCTTGTTCAGTAAAGCAGCA TGCTCGAACTTCAATGCAAATAGACagttttctttttatcttgtccgtaa taatttcttttttttaggtTCATCAATAATTTTGGTGTTCTTGGCGTTCT TGACCGTTTGCACGGTACCGACAGTATGTTTGTCAAGTCAAATGCGTACG ACCGCCATATCCTCTTACTTGGATTGGAACCGGCAAAAGCGCTTTTCCCT GATGATAAGAAAAAAGGATGcgagaaaaaaacgaattaaaaaatgatata aacTTTTGCGTTTTATACCCtaaaaatccacaagtaatgttTGGAATATG TtattcaaaaatcaaacaatATATGCATCGTATACcgtaaaaattgtatt ttaagatTGTTATGTTTTATGCGTATAATGTACctattatgtttttattt tttatctgtaTGTAATATTTCTAAAGCTTTCTTTTATAATcatctctctc taattcgaacctctactattcaaattcaaaaatattgccCCTGAGGGGGC TTAGCTTAAAAGAagtactctctgtaattcgaatctttcttcaACTCGAA GAAGATTTTcggtcccttgaaaatcgaattaaaaaGAGAGTACTGTACTC ATATTTTGGTTGGCTTTATTCTTCATCGATTCTTTCATAAAGCTGTTCTG AAAAGTTAAAGAtggattttttagaaattgtgGGTCACTAGAATCTACTA GAGTTAGAGAAACCAGCTCTAAATGAGAAAACATTTTGGTGAAAATATCA TAATTCAGAGCgagaaattttgtgaaatttagaAGCCCGTTAGAAttact tttctttttggttttcGCAAAAATTCGATACTCTTGCAGAGGTAATTATG GAAACAAACCAAACTTACCGTCCGCATACACCCAGCAGTCAATTTTTCCC GAAACCCCTTATTTACTATTTTTGCAACCTTCGTTTCATATTATCAATGT AGAATGAAATTCTTTTGCTTTTCACGCCTCTTAACTTTAGCCTAGTACTA GATTGAGTATTTGATATATGCTCACTATGTATGTACTTATCTTTAACTAA TAGTTTGCAGAATAAAATAATATGTTTAGTTTTGTTAGCAAAACTAGTTT GAGTTTTTATTGATTAATGCCCCCTACGCCCCCAGCGGAGTTTCCGATCA CATCATCACACAAAAAGATTGGACGTCATCATAcaaatcttttttcttca tcttgCGCCGTA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00000747TCONS_00000747Clytia hemisphaericatranscript
TCONS_00000748TCONS_00000748Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00000747-proteinTCONS_00000747-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000005supercontigsc0000005:1362307..1368218 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
FAXDC2fatty acid hydroxylase domain-containing protein 2 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
32.35 31.51 21.94 21.76 7.66 7.15 28.81 32.5 75.2 65.79 125.47 62.07 70.11 72.7 34.56 38.21 59.02 67.27 53.18 86.14 82.36 83.21 44.15 51.38 106.2 94.81 54.91 61.89 68.47 56.61