Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00000747-protein ID=TCONS_00000747-protein|Name=TCONS_00000747-protein|organism=Clytia hemisphaerica|type=polypeptide|length=347bp
MEKQCVPDKELPEWAKPKPKGAPPSQVKKNLLSSAIQSAFIIGSFLLAFA
SLRNSLTWKFEELWGGSKTFYQDVWTYFYRDIFKGNRLLLSTFGVHAIIF
AWFWLNSIFFFILDVFEPKFFMKYKIQEDKKPTRAQMLKAIRVVMFNQLV
GLIFSFPIYYFVAKRGMTYDAEDLPTFQWFLVEMFVYIWVEEFGFYYSHR
LGHHPRLYKHIHKIHHEWTAPISIIGIYNHWLEHIVSNILPVTLGPLIMG
SHMGSLVMWTCIAITSTQISHGGYHLPLLPSPEAHDYHHLKFINNFGVLG
VLDRLHGTDSMFVKSNAYDRHILLLGLEPAKALFPDDKKKGCEKKTN Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR006694 | Fatty_acid_hydroxylase |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0008610 | lipid biosynthetic process |
| GO:0055114 | oxidation-reduction process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005506 | iron ion binding |
| GO:0016491 | oxidoreductase activity |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0008610 |
lipid biosynthetic process |
| biological_process |
GO:0055114 |
oxidation-reduction process |
| molecular_function |
GO:0005506 |
iron ion binding |
| molecular_function |
GO:0016491 |
oxidoreductase activity |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR006694 | Fatty acid hydroxylase | PFAM | PF04116 | FA_hydroxylase | coord: 185..308
e-value: 1.1E-19
score: 71.0 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..24 |
Blast
BLAST of TCONS_00000747-protein vs. Swiss-Prot (Human)
Match: FXDC2 (Fatty acid hydroxylase domain-containing protein 2 OS=Homo sapiens GN=FAXDC2 PE=2 SV=1) HSP 1 Score: 279.256 bits (713), Expect = 1.438e-92 Identity = 147/322 (45.65%), Postives = 199/322 (61.80%), Query Frame = 0 Query: 25 SQVKKNLLSSAIQSAFIIGSFLLAFASLRNSLTWKFEELWGGSKTFYQDVWTYFYRDIFKGNRLLLSTFGVHAIIFAWFW-LNSIFFFILDVFEPKFFMKYKIQEDKKP--TRAQMLKAIRVVMFNQLVGLIFSFPIYYFV---AKRGMTYDAEDLPTFQWFLVEMFVYIWVEEFGFYYSHRLGHHPRLYKHIHKIHHEWTAPISIIGIYNHWLEHIVSNILPVTLGPLIMGSHMGSLVMWTCIAITSTQISHGGYHLPLLPSPEAHDYHHLKFINNFGVLGVLDRLHGTDSMFVKSNAYDRHILLLGLEPAKALFPDDKKK 340
S+ + ++ S ++AFI+GS LL+F + NS+TW + WG S F+Q W F+G +L G + +FW N + + +P F +Y+IQ K ++ ++IR V+FNQ + SFP+ F+ K +LPTF WFL+E+ ++ +EE FYYSHRL HHP YK IHK HHEWTAPI +I +Y H +EH VSN+LPV +GPL+MGSH+ S+ MW +A+ T ISH GYHLP LPSPE HDYHHLKF +GVLGVLD LHGTD+MF ++ AY+RH+LLLG P PD K+
Sbjct: 14 SKQEGHIWGSMRRTAFILGSGLLSFVAFWNSVTWHLQRFWGASGYFWQAQWERLL-TTFEGKEWILFFIGAIQVPCLFFWSFNGLLLVVDTTGKPNFISRYRIQVGKNEPVDPVKLRQSIRTVLFNQC---MISFPMVVFLYPFLKWWRDPCRRELPTFHWFLLELAIFTLIEEVLFYYSHRLLHHPTFYKKIHKKHHEWTAPIGVISLYAHPIEHAVSNMLPVIVGPLVMGSHLSSITMWFSLALIITTISHCGYHLPFLPSPEFHDYHHLKFNQCYGVLGVLDHLHGTDTMFKQTKAYERHVLLLGFTPLSESIPDSPKR 331
The following BLAST results are available for this feature:
BLAST of TCONS_00000747-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 ( Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
| Match Name | E-value | Identity | Description | |
|---|
| FXDC2 | 1.438e-92 | 45.65 | Fatty acid hydroxylase domain-containing protein 2... | [more] |
back to top
|
