XLOC_045211 (gene) - C. hemisphaerica

Overview
NameXLOC_045211
Unique NameXLOC_045211
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_86:199383..204265+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_045211 ID=XLOC_045211|Name=XLOC_045211|organism=Clytia hemisphaerica|type=gene|length=4883bp|location=Sequence derived from alignment at scaffold_86:199383..204265+ (Clytia hemisphaerica)
tgaatagaaaatatattttaaataacCGGTAAAATTAATTCATTTAATAT TTCCCTTTTCCAAACCTCTGAATGCACCcatgaaaattgaatagaaaCTA ATAGACCGAATCTGAGAGATAGAAATCTCGGTTTTACAAAGAATTGTAGC TATAAAAATAACTGTTTCGATAAATGTGTTCATCTAGAACATGCCATTGC CACAGCGACTCGTTTGGCGAACGATTCTTTCCTTGCAAGGTTCCACTGGT TGACAAAAAATTGTacataaaaagtgaaatgctCTTGCGTCATCAATTTT GCAGATGTTTTAATGCATTGCAAGAAAGCATTAAATTGCTCACAGATGGA TGTGTTCAAGCCATTAAAGCCAAGTAATCGATTTGACTTGAACACATCAG AACACTTATGTCCATATCCATGGAAAATGTCGTGGAAAAAACGTGTGTCC TGAAAAAAGCCACTTTCTCGGTTTCGACAATATTCTTCAAGCGAGCAAGC AAAATCGTAAAAAATCTCATACGGCGCCTGCTTCATGTACGCGTATAATG ATGCCGCAGCATCTTTTCTGCCCTCAGCATGGGGTATAATATGATACCCA TAACAATGCCCGTGGGCTGGGCAAAACCACAAAAACAAGTAAGAGGTCCC TTTTGAagtggggaaaatttttgagcACACGTCACTGTCAGGCAAATCAT CAAAGTtagattttttgtcttttttgtcttTATCGATATCAAACTTTCTG GTTTGTCTTATTTGGGAGCCGTCGTGAAAGTAATACGCTCTACCATCTCT CGGTGGGTTGTATTTCTTAACCGATTCTGGCTCTTTCGGGGATATATCAC AGCTGTTTAGTTCTTTCCTAAGGGTAGTCagatacttgaagaattcaatT ACGTATTTTTTAGGACAAGATCCTTTGGAAAGCGATGTTGCAATAAGTAG CCAATCGCCTAGCTCTGGAAAGAAAAATTTGGAAGATCGATGGAACTCTT CAACTACACGCCACAGATCGCCGTTCTCCTCGATTATGTTTGCTGATGCC ATCATATCATTCAACCGATCAAACTGGTCCAAGTACCGTCTAGGGATCAG GTTGGTTAAGCTAGTATCCTTTGTCAGAATAGCAAGAGATTTACTGAGTG CTACTTTTTCGAGATTCGACATACCAGGCTCGAATAATTTTTCTGTGAGT AGACGCACAACTGGGATACTTGAATCGGCTAATATTTCTTTGGTTTTACC CAATTCTTCTCCAGAAAGCTTAAGTTTTCCACAAAAATGCTTCACTAACG AATGGAGAGCATCGTTGACAACTTTTCTGTCCTTTTTACTGTTTGTGTTG TTGATAAAAGTTCTATCATACCTCCTTTTATTTGTAGGCAAGAACTCTCC ATCCGTAGCCTGTTCAATCGGTGTCACATTGATTTGTTTGAAGGTTATTC CAATTTTCGTCCCATCGGCGGCTAAGTATCTTGGATTCGGACCACAGCTT GGACACTGTTGGATAAAATCCAAATTCATAGCTGAAGCCCAACTGAACCA CCACTTTATGAGCGTGTTCCGTGACAAGAACTCGCATTGCGACTTGTAAT CCTTATATCTATTCTTCAGGACTTTAACGAATCCAGAAAAGGTTTGTTTA CTGGTCATTACCAGATCGACAAATTCCCAACCGATTTCATAACCACAGGC AACAGTCGAACTTGAACGAAACAAGCTGTCTTCGGAGCCATCGTAACCAC GAAAACATCTTTCTGACAAGCATTTTCGTTCAAACAAACGTGCCTTTGAA GCCCCAACAGTTGAATAAACTACCGTTTCTCCACGAGGCATGATATGACC GTCCGGATATTCATCGTTATACCAACCACTCTAACAAGAAAAAGATTATA CCTTTTAAAGACGAAATCAATGATATTAAAAGGAACTTCATTGAACTTAA AGTAGACGATACTAAACTTAGAGTTGTAGATTTTCAGCATTTATATCCAA TATCGCCACCCTTAAAGGGTTCCTACTTCTTTGCCGACCGCTTTAAACAG ATGAAACGAAAGTGAATAACCGGCGTTTTAACCCCGTTCAATATCtaata gaaattgaatttacCTCGCATCCACAGTTACCATCCTTAGATGGGATCAA CTTTATCTCCTGTCCAAGTAAAATTTGTATGGCTCTTTTTTTTATGTTGT CGCGGTAAATTTCGTCTCTGGAATCATTGACACGCAACTGACTAGGGGCT TTGTCGTGGAATTTCCACTGACCATTTTCCTCGTCGAAAACCTTCTCCCA ctaaaatagaaagaaaatgaTTGCCGGTTAACACTATTATAAACTTACAG TATAAAGCCCCCATATGTCGGTATACACTCTAATCCGCAGGAAAATATAT TAGTTAATTATTTCGTCAATATTCATAGACATAGacttatttttctgaaa acttcTCTGTAAGAATAcgtttttgaatatttcataaaaaattaaatatt ttgtataagAGATTTGTATCTATCGCTTACAAGTAGAATTTTTAGAAAta cctttatttaaaaataaacaaacctcCGAAGGGTCGTTTTCTGTTTCCAA ATTATCATATTCCATATCCATGCCAAAGTCAATGTCTTCACTATCTTCCT CATCATCGTCATCTATTTCGTCGGCGAATTTCAGTGTATTGACATCGAAA GAACTCCTCAGAAATTCCAAATGCGGACACAATTTTTCGGAAGTTTGAAA CGTCTCTAAATACCTTTCTCTGGAAGGTTTGGATTGGCAAAATGAGTTGT GGCATGTGATGACTTTTcgcttcttctttttatttctaNAACTTTTTCGA GATTCGACATACCAGGCTCGAATAATGTTTCTGTGAGTAGACGCACAACT GGGATACTTGAATCGGctaatatttcttttgttttacccAATTCTTCTCC AGAAAGCTTAAGTTTTCCACAAAAATGCTTCACTAACGAATGGAGAGCAT CGTTGACAGTTTTTCTGTCCTTTTTACTGTTTGTGTTGTTGATAAAAGTT CTATCGTACCTCCTTTTATTTGTAGGCAAGAACTCTCCATCCGTAGCCTG TTCAATCGGTGTCACATTGATTTGTTTGAAGGTTATTCCAATTTTCGTCC CATCGGCGGCTAAGTATCTTGGATTCGGACCACAGCTTGGACACTGTTGG ATAAAATCCAAATTCATAGCTGAAGCCCAACTGAACCACCACTTTATGAG CGTGTTCCGTGACAAGAACTCGCATTGCGACTTGTAATCCTTATATCTAT TCTTCAGGACTTTAACGAATCCAGAAAAGGTTTGTTTACTGGTCATTACC AGATCGACAAATTCCCAACCGATTTCATAACCACAGGCAACAGTCGAACT TGAACGAAACAAGCTGTCTTCGGAGCCATCGTAACCACGAAAACATCTTT CTGACAAGCATTTTCGTTCAAACAAACGTGCCTTTGAAGCCCCAACAGTT GAATAAACTACCGTTTCTCCACGAGGCATGATATGACCGTCCGGATATTC ATCGTTATACCAACCACTCTAACAAGAAAAAGATTATACCTTTTAAAGAC GAAATCAATGATATTAAAAGGAACTTCATTGAACTTAAAGTAGACGATAC TAAACTTAGAGTTGTAGATTTTCAGCATTTATATCCAATATCGCCACCCT TAAAGGGTTCCTACTTCTTTGCCGACCGCTTTAAACAGATGAAACGAAAG TGAATAACCGGCGTTTTAACCCCGTTCAATATCtaatagaaattgaattt acCTCGCATCCACAGTTACCATCCTTAGATGGGATCAACTTTATCTCCTG TCCAAGTAAAATTTGTATGGCTCTTTTTTTTATGTTGTCGCGGTAAATTT CGTCTCTGGAATCATTGACACGCAACTGACTAGGGGCTTTGTCGTGGAAT TTCCACTGACCATTTTCCTCGTCGAAAACCTTCTCCCActaaaatagaaa gaaaatgaTTGCCGGTTAACACTATTATAAACTTACAGTATAAAGCCCCC ATATGTCGGTATACACTCTAATCCGCAGGAAAATATATTAGTTAATTATT TCGTCAATATTCATAGACATAGacttatttttctgaaaacttcTCTGTAA GAATAcgtttttgaatatttcataaaaaattaaatattttgtataagAGA TTTGTATCTATCGCTTACAAGTAGAATTTTTAGAAAtacctttatttaaa aataaacaaacctcCGAAGGGTCGTTTTCTGTTTCCAAATTATCATATTC CATATCCATGCCAAAGTCAATGTCTTCACTATCTTCCTCATCATCGTCAT CTATTTCGTCGGCGAATTTCAGTGTATTGACATCGAAAGAACTCCTCAGA AATTCCAAATGCGGACACAATTTTTCGGAAGTTTGAAACGTCTCTAAATA CCTTTCTCTGGAAGGTTTGGATTGGCAAAATGAGTTGTGGCATGTGATGA CTTTTcgcttcttctttttatttctataAATGGTAATTAGCTCTGCCTCG TTTTCTTTTGTTAccactgaaaatttgaaaacgttACTTTTTGATGGTAA TTGAACAATCGGCTTCTTGATATATGATTCGGCCTTCGAAATCAACTCTT CATTAAAGTAGCTTCTTTCTATGGAAGTCTCGTCATTCTCATTCGGCACA AACATCATGGGCTTGATTTTAAGAATATCTTTTGCAAAGCGACAGTGACA ACAATTCATCCCTTCAAATTCCACCGGTCCGCTGATTTCCTCCTCGTTTA AAGTTGAATTCAGTAAGCCGTACAAACTACAGGAGCATCTTATTATTGGA CCAGACGTTGTACCGATAATCGTGACATGAACG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00072834TCONS_00072834Clytia hemisphaericatranscript
TCONS_00072835TCONS_00072835Clytia hemisphaericatranscript
TCONS_00072836TCONS_00072836Clytia hemisphaericatranscript
TCONS_00072837TCONS_00072837Clytia hemisphaericatranscript
TCONS_00072838TCONS_00072838Clytia hemisphaericatranscript
TCONS_00072839TCONS_00072839Clytia hemisphaericatranscript
TCONS_00072840TCONS_00072840Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_86supercontigscaffold_86:199383..204265 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.3 1.63 1.11 0.86 57.63 48.9 49.33 58.63 36.66 42.15 46.79 35.05 37.5 30.15 16.67 26.5 23.86 24.44 23.57 31.63 27.36 27.11 11.19 12.65 17.55 26.04 56.47 46.3 37.08 35.11