XLOC_045139 (gene) - C. hemisphaerica

Overview
NameXLOC_045139
Unique NameXLOC_045139
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_82:255391..263562-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_045139 ID=XLOC_045139|Name=XLOC_045139|organism=Clytia hemisphaerica|type=gene|length=8172bp|location=Sequence derived from alignment at scaffold_82:255391..263562- (Clytia hemisphaerica)
ATATTTCTTACATGTTTCTTCGGTCAGACGTAGTGTCGGTCATGTGAGTG AAGTAATTTTTACTTTAATTCAAAGATTTTTCAGTTTGGTTCAATCTAAA AGATCTTTCTTGCCTGTTTTTGCTGTTTTTATTTTGCATTGCGTATTTAA AATCGCTCACAACATCTTGATTTTCTAGCTAGCTAATATCTCAGAATATC TTTTTTGATATATTTTATTGAGATAACTCTAATCCTTGTCTTTGCAATTA CATTCTTTAGATGACTGATGCTTTTTTTCAGAAACCTGAATTTCCTAGTG TGACTAACTGGTGGGCAGACCAACTAAAGATGTTCATTTTGAGAGTGAGA TAGAAATTTTGAACATGAAGGAAAATCCAACATGTGTTACCGTAAGTTGG TCTAATGTCGACATCCGTCTTCTAATTTCGACATCCTACTTTATAGATAG GAATAAAAAGAAGGTCGAAATCACTGATAGACTAAAGATTTTTCCTCTCA TCGGGCGGCTAATCAAAGTCTATCAGCGATTCCGACCTTCCTCAGTTTCT ATATTGTTCCTATCTCTAAAGAAGGGTTTCAAAATTAGAAGGCGGATGTC GACATTAGACCAACTTACGGTAGGTTCCATGACCTGTCAAGATTTTTTAA TATCTTTTTCTTTGGTAAAACAATCTCAAATAAAAAGGAAATTGACAAGG AATAGATAAGCTTTTCATATAGTCAAACAGAATTATCATAGCTTTTTACC AAAAAAATATATTACTGTTCAGTAAAGGTCCAATTTCAGCCAAATCCAAC TTTTGTTCTTGCTGGTGCAGAGCTCTGACATTAGGCTGTCAGACCGAGAT AAGACGCGGATACTTCAATAAAAAGTTATGCAAGAAAAACCACCATTTCC ATCTAAAAAGGTCACTTTTTTTGCCAAAGAACTTTTGATAAAACTGTTCC CCTAATTTCCCCCTTTCACTAGATCTTCCTCTATCTTATGTGCTTCAGAA AAACCAAAAACATTGCCCTAAAAGCTTAGCCTCGCGTTTATAAATTGAAA ATCGGGGAAATTCTTTTAGCAAAGTATTCTATTATCATTATCCCTTTATT TTAAGTTCTGGAACTTTTAAAGAAAAATGGAAAAATAGAAAAGTTGTATT TATACTCATAGTGTGCAGAGAGGTCCAGCCCCCAGCATTTTTCAGGGGGG GCTAAGGAAAATAGCCCTCAGCTAAATTCTAGAATTTAAATTCTAAATTC TAAATTCCTCCACCTTCACAAAGCAAAATATCAAAGAAATTTTGCATGCA AATTTTCGATAAATTTATTGCGCCGCAGGGAAAATGTTTTTTCAAGAGGG ATAAAACCTTCCCAACAGCATAGATTTTTAACATAATTTAAAATATCTTC AACCTATCAGCTCTGCCACCAGTTCTACTACACAGCACTCAGCCCCCCCT AGCAAGCTAGCCTCCAGTAATTTTTGAAAAATACAGCCCCCAATCAAACA AAAATGGTTTAGCCCCCCCCTAAGCTCAGGGGGGATTCATTCTATGATAC TGCTTTATTCATATTTTGAATTTAAAGCTCTCCCTATGTGACTTTTTTTT GCAAACTTCAAAAACCTGATTTTTTTCCGTTTTTTGCGGGACTCTAACTT AAGTGCTTGCATGCAGCAATAGGTACAAAGTCCAAATATGCGTTATTCGT AGATTTTGTTTGAAATTCGGTACCTCTAGTGGGGATAATGACTTAGGGTT TAGATCTTTTGATAATCAGGATGCCATGTTGAATAATTAAAAACTTCAAA CAATGACACAGTTAATGCATTATTTTTGTAGACTTGTGGAATGCATACTA TTTTCATATAATTAGGTATTGGGCTCGCCACGCCTGTGAATCCTTTATAG CTCCCTACTAACTTGGGCAATGTATCTTTCCATTAAGTCATTGGCGCATG ATCATCTGCAAAGCTATCTTTTTCATAGTACTGAATCATTCGTTTGTTGA AGATCACCACCGAAACTACAGACTACCTGCAAGAAAAATAGTTGGGTTAA TTTATTGAGGTTTCTTCCTCTCAAGTTTGGCTGTGCTGGTCCAAACAGGG GCACCTCGTGAAGGATGTGTATTTGAAATTGCTTAAAATTCTAACAAGAT TCTTAATATTTCTTGCAGCAATAAATAATTATGGAGCTGTATTTAGTGGC AGGGATTGTTCTCGTGACAATATGTAAGTTATCTATATCTTATTAACTTA ACCTTGCCTCACTCATTTTTAAATGTTTATTATCAAGCTTTTTGGGATTT GTATTATCGTTATCTGCCAGGCTACGTGATTTTTATCTATTTTTTTTGGC CTCATCACAAAGTTTTGTATTTACCACTGATCAGTTAAAATAGCAATTAA AGTTGAACAATTTTTCCAAAGACTGTAATTCTGTTTTGATTTTCAAAAAG CCATGTGAATCAATTTATCATAATTTTTAATTGCTGCTTATAACATAGCA AAGAATTGACTGATAAAAGCTATGATGATTTTAAAAGGACGTAGAAATTT GGTTCTCAAAGCTTAACAAGCAGAATTCTAAAAATTTTTAGAACTATTGT GACTAAGTTGTAACCAACTAAAATTTACGGAGTTAGAATTTGTAGATAAT CTTTTAACCTGATGCAATTTCTTCTTTTAGTAATAGTGTTGCTTTTGATT CGATCAAGTAAATCTGGTGATAGCGTCATTCTTTTGGGCTTATGTGATTC TGGTAAAACTTCATTATTTGGACAGGTAAGTTTGTTGATATTCTTTTAGT TTCATAATAATTTAAGAAACATTAGCATATAACAGGTAGCTCTGAAATCT AAGAAATATTGATAATGTGATCTAAGTCTGCTTGCAATAAGTGTTCACTC TTATGGGTCTTTTCGTGGAAACAATGTCATTTTACAACTCGCTGATTTTT CAGCTTACCACCGGAAAAGAATTGAAGACCCAAACTTCCATTATTGAAAA CAAAGGAAAGATCAGTACAACTGCCACAAAGGTACTCTAACCCCCTCGTA TATTTTTTAAAAAGCTTTTTTCTTGTGTGTAATAGGTGCTTAGCTATGAC ATATTTGGTGGCGTATATAACAAGATATCGAGCATTTTAAGGTGTCTATG AAATTCCATATTGATGTAAGATTCAAAATCAATTCTTATCAATCTACTAT TTCGTGTACTCATGATATGCACCACTGCAATGACTCCACTAAATTATGCA ACTTTTCTGTTGTTTTTTGTTCCACCCAACACGTCACTTTTTCTATTGTT TAAGTGACGCATTGGGCTGAAAAGCTTAAAAGTTTTCAGAAGACTCTCCA GTGGTGCATATCATGAATATATCGAGAAAAAAGGAACTAATTTACAATTG TTGGTGCAGTCTTCAGACAATGTAGATCTTTGTTGTATTTATTTCACTGT ACAAAAAGCTATTTTTTACCTCTTCTTTTCTTCTGATAGAACGGTAAACC GTGGAAATTGATTGACATTCCAGGCCATGAAAGAGTTCGAGATAAATATT TCTACAACAACAAAGACAATGCAAGGTAAATTCACAGTAGTTTGATAACA AAGTAGTTATCCTTGCTGCTATCTCTATGTTTTTAATTTTGTTACGATTA CTGACACTCTTGTATCCCCTTCCTTAGCATTGAAAATAGCGAATTTATGT AAAATAAAGACTTTCGCATAAGGGTATTAACTCAGGCACGGGAATTTTGT TTAATGTAGTTTTTAAGAATATGGAAATAACTTAAGTTATTTGAAACAAG TGCGTTTTATTTTTAGAGGTATTCTTTTCCTGATTGACAGTGTCAATTTC CCTCGAGAAATTCGTGATGTGGCAGAGTAAGTCTTGTTTTATAAAAATTT ATTAAGATTAAGTCTGTTTGCTGTGAAACACGTTTCCCTTAGCTTCGCCA TTCAAAGTGCTTGAACAGGAGAATATTTCATATGGATCTTCCAAACTGTA ATTTCAACTCCGTCCAGTAATAAAAAGCCGTTCAACTGAAAATCTTCAAT CCTGGTTTATTTTACACTTCTTTGATCAGACAATATTAGGTCCCTAAATG GAGATGCTAGCGTAACAGAAGTGTCATCGTTGACTCACTGTTCTTTTCAA TTTCACAGATGCATGTATGACTTGTTAGCTAACCGCACAATGCAAAGAAA CAAAGTCTCTGTCATGGTCGCCTGCAACAAACAAGGTATTGCATTCAAAT CCTCTGATGATTATATTTTCCAATATGTTGAAATTATTGAAATTAATAAT TAGTATTATGTATTAGTGATATAATTAGAAGTGTCTGACTTCTAACGATA TACCAATTCAAATTACAGATATTCCCACCGCGAAATCACACAACGTTATC AAAAGCCAATTGGAAAAAGAATTGTAAGTTTTATCTTATCTTAGCTTCTA AAGTTTTCTATCTCTGCTTACCAAGCTAACAATCAAAAGTATGCCACAAA GTTTACAACTTTATTTTCGTAAAGATAAATCTCTCATTAATCTTGAAAAA ACGAAATCTATGTATTTCCTTAAAGTTCTTGCATCGGAGGTAACCTCTAT AAGGTAAGTCTCTATAAGGTAGCCCGTTTCAGTCGAAAAACACCGTTTTT TTCACTCAAACAGGCAACCCTCTAAGACTTGTAACTTTAAATTCATGTGA AAAACCATGGTTTATCTGAAATGAGTTTCTAGCACTAAAGGATAAAAAGT GCATTTTTCATCTTCTTTTTCTAAAATTTTTTAGAATAACTTATTCCAAA AAATTATAGTGCTATGAGCACAGATCTGTAAAGCCCGAAACTTTAAGCTT TCTCCAGCAAAAAAAAGTGAAGCGAAAATTGAACTTTTTAAATTTCGTGC CGATGGATAGGATCTAGCATTTTAAAATTGTTTTTGGAGCGCGAGATAAA AAAAGTAGTGATTTCTTTGGTAGGGAAACCTACCAAAACTTGCTTCACTT TTCGATAAAAGGCCGCGGATCTAGGCTATGAGTTATCTTTTCAACGGCGT ATGATTTGTTGTATTTGAGACATTCGTTGAAAAAATGCAAGAAAACAAGC ACTACTTACTTACTTAAAAGTGAATGGACTTTTAAAATCTATAAAATCGG GTGATGAAAGTCGATCTTAACATTCCCCTCTCATTATTTTCAATTTCAGA AACAAACTTCGGCAAACTCGTTCGGCAGCTTTACTTGGAATTGACGATTA TTCATCCAGTAGAAATGCTTTCATCGGTAAGCAAGGGAAAGACTTTGAAT TCTCGCATGTCAATCCAATCAAAGTTGAGTTTTGCGNTTTTTACCTCTTC TTTTCTTCTGATAGAACGGTAAACCGTGGAAATTGATTGACATTCCAGGC CATGAAAGAGTTCGAGATAAATATTTCTACAACAACAAAGACAATGCAAG GTAAATTCACAGTAGTTTGATAACAAAGTAGTTATCCTTGCTGCTATCTC TATGTTTTTAATTTTGTTACGATTACTGACACTCTTGTATCCCCTTCCTT AGCATTGAAAATAGCGAATTTATGTAAAATAAAGACTTTCGCATAAGGGT ATTAACTCAGGCACGGGAATTTTGTTTAATGTAGTTTTTAAGAATATGGA AATAACTTAAGTTATTTGAAACAAGTGCGTTTTATTTTTAGAGGTATTCT TTTCCTGATTGACAGTGTCAATTTCCCTCGAGAAATTCGTGATGTGGCAG AGTAAGTCTTGTTTTATAAAAATTTATTAAGATTAAGTCTGTTTGCTGTG AAACACGTTTCCCTTAGCTTCGCCATTCAAAGTGCTTGAACAGGAGAATA TTTTATATGGATCTTCCAAACTGTAATTTCAACTCCGTCCAGTAATAAAA AGCCGTTCAACTGAAAATCTTCAACCCTGGTTTATTTTACACTTCTTTGA TCAGACAATATTAGGTCCCTAAATGGAGATGCTAGCGTAACAGAAGTGTC ATCGTTGACTCACTGTTCTTTTCAATTTCACAGATGCATGTATGACTTGT TAGCTAACCGCACAATGCAAAGAAACAAAGTCTCTGTCATGGTCGCCTGC AACAAACAAGGTAACAAATTTATATCCTCTGATGATTATATTTTCCAATA TTTTGGCAATTATTGAAATTAATAATTAGTATTATGTATTAGTGATATAA TTAGAAGTGTCTGACGTTTACCCCGTTGCTTTCATTTGTAGTCTTTTAAC GATATACCAATTCAAATTACAGATATTCCCACCGCGAAATCACACAACGT TATCAAAAGCCAATTGGAAAAAGAATTGTAAGTTTTATCTTATTTTACCT TCTAAAGTTTTCTATTCTGCTTTAGCTAACGATCAAAAGTTTGTCACAAA GTTTACAACTTTATTTTCGTAAAGATAAATCTCTCATTAATCTTGAAAAA ACGAAATCTATGTATTCCCTTAAAGTTCTTGCATCGGAGGTAACCTCTAT AAGGTAGCCCGTTTCAGTCGAAAAACACCGTTTTTTTCACTCAAACAGGC AACCCTCTAAGACTTGTAACTTTAAATTCATGTGAAAACCATGGTTTATC TGAAATGAGTTTCTAGCACTAAAGGATAAAAAGTGCATTTTTCATCTTCT TTTTCTAAAATTTTTTAGAATAACTTATTCCAAAAAATTATAGTGCTATG AGCACAGATCTGTAAAGCCCGAAACTTTAAGCTTTCTCCAGCAAAAAAAA GTGAAGCGAAAATTGAACTTTTTAAATTTCGTGCCGATGGATAGGATCTA GCATTTTAAAATTGTTTTTGGAGCGCGAGATAAAAAAAGTAGTGATTTCT TTGGTAGGGAAACCTACCAAAACTTGCTTCACTTTTCGATAAAAGGCCGC GGATCTAGGCTATGAGTTATCTTTTCAACGGCGTATGATTTGTTGTATTT GAGACATTCGTTGAAAAAATGCAAGAAAACAAGCACTACTTACTTACTTA AAAGTGAATGGACTTTTAAAATCTATAAAATCGGGTGATGAAAGTCGATC TTAACATTCCCCTCTCATTATTTTCAATTTCAGAAACAAACTTCGGCAAA CTCGTTCGGCAGCTTTACTTGGAATTGACGATTATTCATCCAGTAGAAAT GCTTTCATCGGTAAGCAAGGGAAAGACTTTGAATTCTCGCATGTCAATCC AATCAAAGTTGAGTTTTGCGAATGTAATTTGAAGAACACACAAGTTGAGG GAGAAGTAAAAGTCGATGGCGTTCGTACTTGGCTTGAAAAATTGTAGATA TTATCAGTGGTTTTTAGGGTGTTGTTATTTTTATTTATTAGTAATGATAG TAACATATTAGTCCCCGTGTCAATCAAAAATTCAGCTTTTTCTAAATTTC TAAAAACGAGAATTTTCAGATTTACATTCCTAAACCAAAAGACAAACTAT CTTATTCCCGTGGTTTTCTAGCCTTTTCAAAAAGGATCATGCAAATTTGT ATAATCAATTTTGTTGTGTTTTTTAAAATATTAGTTTGTTTTAATGCAAA ATGAATATAAATGTATTTTGAAATGCGAAATTTTGCATTTATATGGATCA ACTATTTACAAATGCGTTTACGATTAGAAAATAAATTGCTTTTCTTGTTT ACCCAAAATATTTAATAAAAAATATTTTGAGCGAAAATTTATGAATGTTC GATCTTCTTTACACAATATTAGGTAAATGATTTTCTTGCCCGATTAAACT GGTTTTGGAGTCAGTTCTTTCTTTATGCTTCTGATTGACTTTGACAGGAC TTCCAGCTTTATCGCTTTTGGTTTCGTCATCATCATAGCCTAAGTTGAAA AGGCTCTCACTAGCCTCTGATTCTGTTGCTAATAAAGCATCCATGGACAG TTCAGGTGCTTGATCTATACCATCTGTTTCATGTTCTTCAGGAACTGAGG CTAGTTCAGGTGATTTTTCTGTTACCGACTTTTTCTGAGGTGAGGGGGGT GCACCTGTTAAACGTCTTGTTTTATCCATCACGCTTTGACGAACATTTCC AAGCATGTTCATGCCTTGTTCCGCTTTTGACTTGGCTTGATCAGCTAAAT GATGTAACATGGAGGTGACGAGACCGAGAATAATGGTCAACGCTGACAAG CCGAGTAAGAAGTAAAGTAGCG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00072728TCONS_00072728Clytia hemisphaericatranscript
TCONS_00072727TCONS_00072727Clytia hemisphaericatranscript
TCONS_00072726TCONS_00072726Clytia hemisphaericatranscript
TCONS_00072725TCONS_00072725Clytia hemisphaericatranscript
TCONS_00072724TCONS_00072724Clytia hemisphaericatranscript
TCONS_00072723TCONS_00072723Clytia hemisphaericatranscript
TCONS_00072722TCONS_00072722Clytia hemisphaericatranscript
TCONS_00072721TCONS_00072721Clytia hemisphaericatranscript
TCONS_00072720TCONS_00072720Clytia hemisphaericatranscript
TCONS_00072719TCONS_00072719Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00072727-proteinTCONS_00072727-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_82supercontigscaffold_82:255391..263562 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
SRPRBsignal recognition particle receptor subunit beta Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
98.78 101.67 73.24 66.5 27.71 21.65 102.3 102.1 76.19 72.88 63.35 60.05 59.34 53.82 46.37 55.85 47.87 46.02 27.82 37.33 30.07 29.14 44.78 46.05 41.63 45.7 33.16 28.78 44 31.26