XLOC_044837 (gene) - C. hemisphaerica

Overview
NameXLOC_044837
Unique NameXLOC_044837
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_71:1173861..1179865-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044837 ID=XLOC_044837|Name=XLOC_044837|organism=Clytia hemisphaerica|type=gene|length=6005bp|location=Sequence derived from alignment at scaffold_71:1173861..1179865- (Clytia hemisphaerica)
CGAACATCGAGTTTGTAGGGAGACCCAGTCGTGTAAGCTTGTAGTTAATT ACAAAGTAAGGTTACTATAACTATAATTATATGAAATTATGAAATAACAG GGTTTTCATCTAAGTTTGTGTATTACGATTCATAATCGTTACTAGTATAG TTTTAGGCTGTCTGCGTCGACTGAACAGATAAATTCATTTTGGGAGCATC CAGCTTGTTTTAGATGATCCTTTGACTCCTTCATTATTTGAGGAATTCCA TTATTTGATTGAGGGACAGACTAATTTATTATTTTACCAATTTACTACAC CAAGAATGGCTGAAGTAGGATGGGATGATGTCACTTATCTCCGGAAGAAA ACACCAAAGGCTGCTGAAGCTCGATCAAGCAAAGTAAGATTTTGATGAAT GAATAGCTATTTTTTTAAAACCTTCTACTGCTATTTCCCTTTCTTTTCAA ATTGGGCCGTTTTAGTAGCATCATGGTATTAACCTTAAATATTTTTTTGC GTACCGTGAAGTCGGGTAACTTGCATCAGTGGAGACTAACATGCATAGTA TCAGGTATCAAAGATTTTAATGCTGACAAGTTGACAGAACACATTATTGA CAAAAGTAATCCCTGAGAGATTACCTGAAAACTTAATTTCTAGTTTGGCA AATCTCCACAAAGATTAGCAAACAATCATTTTTTCCCACTTACAGCTTTT CTCTTTGATCTTTTATTGTTTTTTGTTTTTTTGTTGATTGCTTAGCTTGC ACCATCGACAACTCACACATCATTTCTTGAAAGGGAAACACGGTTTTTCC CAAGCTGTAATGTTGACATACCTTGTTTTAATTTAATTTAAAGTAATGAT AACTTAAAATTTAAGTCAGTTAGTGGAAGTACTTTGATTTGTGAAGCGTT TTTACGTCACATAGAACAAAAGAAAATAGTAAAGGAACAAAGGACTAACC CATAGCCACCATTTCTCAACCATGGGGAATCGACCATTCTTCCCCATAAA TGCGATAAATGAAGAAGCTTTCGATTTCTGATTGCCTGTCTTTCTAATCT GCCAGAAAGTGTTACCGTCAACCTGCTCTAGCTTGGGACTATCTGACAAA ACATTGGACGGCAATTCGGCCACCATTTCACCGAACCTCCGAAGTCATTT GATTTGAGTTAATGAACGGGGTATTAAAAATACACGATTTCTCTTTTGCA CCTAGTATGCTTTTAAATCGCAATATGAAAAAATCCGTATTGGAACACAC GGGAGTGTGTCTGGAAGGAAAAATTTGACAAATTTTTTGTCAAAGACAGT TAGGAACATTTGATTCAAAAATCTTTGGTTTTTTGAAAAGAATACCCTCC AGTGAACATAAAATATTATTACGAAAACGTTTGAAAATTCGTTAAAAAAA GTCTATTGATCAAAATTGACAATTTCATTTTTTGCTTGTCGAAGGTTGGA GCTTGCCCAAGCACATTACAGGCAAAATTTAAAAATACAGTTGNTATTTC GGAACAGTTTTCTAAGTAAAATTCTCGAAAAAAATTCGAGCGAAATATCA AGAACTACAGTTGACGCTCTCTAATTCGACGTTCTACTATTCGATAGGCT CCCTTATTCGATGAAATTTAAAGTCCCCGTCAACAGAAAACTCTAATAAA CGACGCTCCCTTATTCGATAAGCTCACTTATTCGATGAAAATCCGATTCC CCTTGAAGAACGAATTAGAGAGTGTCAACTGTATCAATTTTTGCTCTTAG ACTTCTTAAAAAGGATTTTCAGACTTTTTCGTAATAATATTTTTTGTTCA CTGCAAGGTATTCTTTTCAAAAAACCAAAGATTTTTGAATTTTGAATTTT TATTTTTCGATGACGTCATGTTTTATGGCGTCATTTTGCCTTATTTCCTT AATATCTCCTGATATATTCATTTTCAGATATAGGTTGTGACCTTTTTCTT TATCAGTATTTCATGCTCTTTCGAATGAAACAAACAATTTTCAATTCTGA TGACTTTTTATTTTGGTTGCCATAGTAACCAATGACGCCAGTTTCCATGG CAACGGGTGGTCACACCCGGCCCCACCTCTCAAATTTTGATCTTCTACAT TCAAGGAACAATATTCAATCATAAAATCCCTTTGCACAAGCTGCTGCACA CAGGAAGCTTTTTCGCGACATAGTGGCCCCTACTATACGTCAAACCACGC AGTGCTGACTTTTAGTTTTATGACTTGTTCTCACTCGTTTGGTTTCCATA ATAAAAAGAAAGTCGTTATTTTGAACTGTGAACATGCTTAAAATCGAGGT ACTTCCACTAACTATAAGTTAGCCTTTCCTCTTTAGGCGAAAAGCTTAGA TAACATTTTTAGCTTTCTCACAATCTTAATTCATACTTGTACACTTTTTT TTGAAACTCCCCAGGGCTCGAAATAACGGTCGGACATCAGACATTGTCCG ACCCAAATAGCTTTATGTCCGACCCAAAAACATTAATTTTCAAGCTAAAG CAATCCTGATCAGACATTTTGTCCGACCCACTTAAAATCGTTATTTCGAG TCTTGTAGTACTGGGTAGTACTACAAATATATTTCAGACAACCAAAATTA TTTTAAAGAAGAAACCCTAACTTACTAAAATAGTAGAAAATCATCTCATT TCGACAGGCTGATACATGTTAGAATTCTCGTTCGAATGATACAGGGGCCG TATAATGAATCTTTATTTTTCTTTAGGCTGTCAACAGTGCTATGAGATCA GGGACTGACATTGAGACATCAAAAAAATGTAAGTTAAATTTGTACCTAAT TATTAAAGACCTTTTTTTATACAGCATATTTTTTTGTTGATGAAAGGAAC TTTCATAATTTCACTTTTAAATATCCCAGACTATGTGGGTCAGAACCTTG GGTTTTTCCAAATTGCTTCAGTCACTTTGCCGTCCTCAAAAATGCAATAC ACAAACTCGCTTTCATTACCTAGTTTATGTATACGTGTGTGGCTTTTCTG CAATGGAGACGCTCATGTTCTAATTTGACTAGATGCTGGCCAGCTGAGGA CGACAGTAAATCAACACTTTCACCGTCCTCGATTTTGTGGGTACATAAAC TCCTATCATTTTCCTTTCAGACGGTGGTGGTGGTAATAAGCAACACATGG GATCACGTGACTCAGCTGCCGTATGCCGAGACACAGAAGAAACCAAAAGT ATGTTTTATCTTTGACAATTGTGTGTTTATTGCATTGTGATATTCTTTTT CCAGCAGTGTTGGAACCCGCCTCCCCCCACCTTAAAAATACACACAATTT AAAGATAGAATTAGTTTTCTCTCAAGCTTAGGGAGTTGTCTTTTATTTTT ATGGAGTAGAGTGTGCTCGTTGCTTGATATGTAATGTACGTATCTAATGT CAACAACCCTTTTTAACCCCAACATCCTTTTTTAGTTTTTTTTATCGGCA GGTACAAAATGCATAAGACATAATGCATATTGCATAATGAATAATAGTAT AGTGTAATTTACAGAACGATTTTATATTTTCTAAAACTCTCCTTTGTAGA GGCTAAAACCGCGAAAACCTCTTTAGAAGAGTTTCTTCAGGTTTCTTAAG TAAATATTCCAATCAGAGGAATTTCCCCAGACATGATATTTACTTTTCGA ATCCGAACGAAAGAGAAGACATTCGAATCATAACAACAAAGGGTTTTCCG TCAGCATGAATAATACGAAGATGCAACAGATCAGAAAGGTTCCCCCCTTC TTCCTTCTCTAAAAAAGGTAAACACATAAACATTCGAAAATGTAAAAAGA TTCGAAGTCTATTTTCTTTGATCTAGCTTTCGCATGAAGCTCTTTAATTT ATATTGGCTAGATACTGGATTATCTAGCAAAAAGCATTCACATGGTTAAT GCTTTGTAAGAAGGAAAACCCGTTGCAATTTATTAGCAATTGTTCGAAAA GATCTCTGAGAAAACCAGAATAAAGATCTTGCTATAAAATTTACGTTTTT GAGTTAGAAAAGTAATATACGGAGAAGATATTTTCGTGTTTTTTCTACAC TTTACTACGTTCTGTAAAATAAAACTATGAAAATCATAATGGCGACAAGC ATTTTCAGTGGATCACGGATTTTCTTTACCATCCAAAATTCAAATTTACA GCATTCTACCCTTTATTTTCTGGTAGAAAATGGTATATTTGTTTTGTTGA AAGTATTATCTTTCATAACTTCTTATTATAGCCTCTAAAATTGACATTTT TCAAATATTATACATTATGCATTATGCAATATGCAATATGTTTTATGTAT TTTGGATCTGTCAGTTTTTTATATCTAACTACATAAGCCTTGTGAATTAT TTTCTCAAATAAAGGGATTTGAACGAGGAGAATCTAGAGATGAGAAAGAT TCTTATTCAGCGATTCCGATCTCTAAATCCGAATTCTGAACTCTAAAGAA GAATTACAGAACTAGGAGAGGGTTGTCGAGGTTAGACTAATTTACGGTTT GACTGCTACAGTGACTGTATCAAGCTGCACAAATTGTAGGTTAAAACTCT AATTTAGGTCTTGATAATAATAATAATAATTTTCAAATTGTTCCTTCGTG TCACTTTGCTCAATAATTCGTTTAGAAATCTAACGTTTTTCGTTTTCGTG TGCCAGGGAACCTATATGTGCTAACTCACTCCATCACTCCACTTACATTT TTGTTTTTCTTTTTCCTATTAGTCGAAACGGTATCATTAGATGTCGGAAA ATTAATACAAAAGGGACGAACGGAAAAAGGATTAACGCAAAAAGAACTGG CTACAGTAAGTCTTTTTGTTGTTGTTGTGATTTATTTTGTATCTTCATAC ATAGATTTTTTGTTCTAGTGTCGTAAAAATATGGCAGTGGATTCATCAGC TGTTGGGAAACGTCTTATCGATGAAATGGAAGGGGGATTTTTCATAGATT TGAATTTTGGAAGTAGAGTAGCGAACACTCGTTAATAATTTATTTCAATA TCTTCTCGTGTTATTGCAATTTTATTATGAAAAATTTGTTAACTGTATAA CCTTATTGTTGCACTTGTTAGCGGATCAACGAGAAGCCGCAGGTGATAAA CGACTACGAAGCTGGAAGAGCTATCCCAAATAATCAAATCCTCAGCAAGG TCGAACGCATTATCGGTAGGTCCCAGCCTCTTCTAATCTACTGTATATTG ATTTCCAAAAGAAGTTTCATACACCACCTTTTTAACTTTCTCTGTGTTCT TTGTTATGCCGTTAGGGGCAAGACATAAAGTACTTACGCAGTGAAGGGGG AAGAGGGGGCTTAGCAAAAGCGTACGTCTATTGTTTGAATGATGTCATTT TTATTGTTCTCTGTGTACAAGGGGGGAGGGGGTATCAAATATTTAGAAAG CTTTGTGAACGTACTATAATATGGATTACCTGACAGTACACCTTTTTGAC CGGAGCCACCAATTTACGCGCGGGCATTTTTTTGTCCGCTTTATCCCACT AAAACCGTCCCAGTCCTTTTTTCACACCTATAGACAATAGAAAAATATGT CAAAAAAGGATTGGATGGATAGTGGGATAAAGCGGACAAGAAAATGCCCA CGCGGCAATTCGCGACTACGGTCGAAAAGGTGTATTTTCGATAGCGATGT TAAATTGACCGGCTTTGATTTAGGCCCTGCACTATGCAGAAAGAACGAGG CACGTATCAGTACGTGTCTTTTGATTCTTTTGTAACCCCCTAGTATGAGT TTTGTGTTCCCATACAAAGCGCCTTAGACTTTATTATTTACTGTATTGAA CCTCAAATTTTTCTTCAACATTCAGGCTTGAAACTGAGAGGCAAAGACAA AGGAAAACCTTTCGGAGGACCAAAGGGAAAAAAGTGACGAAAAGGCTCTC ACATCACAAAAGTCGTGTTTCGTTATTGACGTCAGCATTTTTTTGTAATT ATTACCATACATCTCTTTATTTTCCTTCCAATAAAAAACTAGAAAATAAT TATGA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00072217TCONS_00072217Clytia hemisphaericatranscript
TCONS_00072216TCONS_00072216Clytia hemisphaericatranscript
TCONS_00072215TCONS_00072215Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00072215-proteinTCONS_00072215-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_71supercontigscaffold_71:1173861..1179865 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
EDF1endothelial differentiation-related factor 1 isoform alpha Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
453.19 457.9 265.16 213.53 146.11 119.74 279.42 299.46 295.52 290.42 267.62 276.19 266.06 305.83 272.08 284.86 320.31 292.28 240.51 233.51 230.94 248.73 259.28 238.41 286.91 298.01 206.59 177.81 186.35 162.83