XLOC_044370 (gene) - C. hemisphaerica

Overview
NameXLOC_044370
Unique NameXLOC_044370
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_60:1411740..1418166-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044370 ID=XLOC_044370|Name=XLOC_044370|organism=Clytia hemisphaerica|type=gene|length=6427bp|location=Sequence derived from alignment at scaffold_60:1411740..1418166- (Clytia hemisphaerica)
TACAAATTGTAATATGATCCCATAGAAAATACTTTCATATTATTGCTTCT AACATCATATTTTTTTTACAGAGCTTAAACTAAACACATGTAAAATCGTT AAAAAAAATTCAAACACACAGAAATAGGACTTGTGGAAAAATGTTGATTT ACAAGATATGAAGGAAATGTATAAAAAACCTCCAATAAAAGTAGACATTA AAGTGGTATTACTTGGAAGATATTTTTGTGGTAAAACATCACTCATTCAA CGATTTATTTATGGCACGTTTGAAGATAGATACTCCAATGTAAGTTTGTG AGATAATTCTTTCATACAGTGTTCAAAGTTTTTCCGTCTCAGACGGATTT CCTTGTCAGCGAGGTACAAAAAGAGGCTTTTCCATCTCCAAATTGAACAA AATTCAGTAAAACATGAAGAATCTGGCCTGATTTGTTGTTTCAAGTCCAT TTCCGTCTGTGATGAAAACTTTGCTTTGAGTACTGTTCATATAATTTATA TCAGTGCTCCTTTCTCAGCTTAAACATTATTTGATATCTGCAATCAAGTT TACTTTCGATATAATCACATCAATCTTTTGATGCAACATTTCTTAGGGAT AAAATGTTTTGCTATTTTATTTAATGCTGGATAAAGTGTGGTCGCCGTTA AATATTTCATCATCCGTAATGTGTTCTGAGATTGATGACTTTTTCATGTT TCATTGATTGTTTGATTGTATATTTGCGGAACCGTGTTGGATATAAAAGT TTTACGGGTTTTGCTCAATCCCCCATGAATTGTTTTTGTTTTCCTGTCGT GAATGAATTCCGGGGGGGCACTCGATTTCTAAACGACCGCATGCGCCGCC AAAAATTGGCTTTCAAAATCGGACCCTTACAGTACAGCTCTTGAGCAGTG AAGAGGTACCCGTACAGTGCATTTTTCCGAACGTACACTTTTACAGTGCA TTTTGAGGGTCTCGTAAAACCTACCCTTAAGGGCGGCACATGCCGTAGGT CGGACCATATGAGTGCCCCCGGGCAATTTTTTCATTTCCATCGACTTTTA TAATCAGGATAACTTTACTTAAAACCTGTTTTTTTCTTCAGACCATAGGA GCTGCTTTCAGTGGCAAAACTATAACAGTGAATGGTAAATCTGTCGAAGT TGCAATCTGGGTATGAGAAATATTTTCCTCAATGATAGCTGGTACAACAG TCTTTACCATTGAGCTTTCTAAGATTCTAAATACACATGAAAGGGAAAGC CCTGTCAAGTTGAGTAAATCTATTTTAGCCACACTCACTCGTCGAATTTA AAAGGCCCTTAATGAAAACTTCAATCTAAAGTATGGATTTCGGAACTTAG GCTTAAATGTTCTTGTTTCTTTCCTAGGATACAGTAGGAGATGAAAAATA TGAATCATTGAGCCGAATGTATTACAGAAACGCAAAAGCTGCTGTCCTTT GTTATGGTATGGTAATATTTGGATGACAAACTCTCTCACTCGGAGCATTA TTTTCCTTGAATCATTTGGGAGATCATATCTTTCTGCACAAAAGCAATAA TCTTTAGTTAATCAAGTTAATTTGATTTGTGATAGCTCGGAGATTTTATA CTCTTTATCATGTGGAGAAGTATTTCCTTAAAACTTCCCCCTTTCTGCAA GAAATTCTCTTACCCCCCCTTTCTGCGATTTTCAAGACATCTCTACCCTC TTTAGGTGTGTGGGTGTGTGAACTATGTGATTGTTCGCAACACTCCATTT ACATGAATTGGTTAACAATTTTTCCTCTTTTAATTAATAGATCTGACAGA TTCAAAGAGTTGGGATCGAGCAAAATTTTGGGTGAATGAAGTCCGCAAAA ACGAAGAGGTTGCAATCTTAACCTAATTTAAAGTTTTAACAACAAAGCTG ACGCGTATTTTTTCAACGTACACATAACTTTAGTTAAATCGTGGGCTGGT GTTTTAATTCTAAATCACTCGTCTATAAAGTTAACGTAACAACTGAAGTT TTGTATTTAGGATCTAAGATTATTGGATTCCATTATAAAATGGGCAATTC CATTTCAAAAACTTAGAAATTTAGAATTCAGGTTAATTAGGTGACTTCGT TGTGTAAATTCGATGAAATTATATTGTTTAAACAACACATTCCCGCAACG TTTGATTGATTATTTGTATGTTTCCATTTATAGGACTGTAAAATCTATCT ATGCGGAACTAAACTTGATTTGATCGCCAACCAAGAACGCGCGGTCGACT TTCGTGATGTTTCAAAATATGCTCAATCAATAGGTGCAAAGGAATTTGAA ACGTCTAGTAAATCTGGTGAAAATATTGGTATGAACTTCAANATGCAAAG GAATTTGAAACGTCCAGTAAATCTGGTGAAAATATTGGTATGAACTTCAA GGCTCGAAAAGTTTTTCCGTAAATTAAGCCTCTAAGAATAATTCCGGGGA AAGATATGCTCTACTGTTGGTTGTGACTGATTTTCATGCTTTCGGAAAAA AAATGTAAAGTTTTTACAAAAATGGAAGAAAGCAACAAAACTTTCCATAC TACCTATCAAGATTGAGGTGTCCCTTAGAAATTAGGTTACAAACCCCCTA AAGATTTAAGATGGATTGAACCCCTCCTAAGATTCAGTACACATTAGGTA GACGGACATTTACTCTCGGGTGCCTAATAAACGTACATGAACTTTTTTTT TTTTGTCAAATTTCCCGCCTGTACCCACTTTATTAGGACCTGTACATTTA TTTATTTTGAGAAATTTTCCCGCCTGTATGTTTATTCCCTCCTGTACGTT TATTCCCTCCTGTACGTTTATTTATTTTGACCCAATATCGCCCGATTCAT ACTGGAAGAAAAAATTTAATTTTTGTTCAAGTAATACACGTCTTAATATG TAATACAAAGGCCGTTAATTACATTCGAACGTAATGTGAGAGATTTCGAA TATTACACGAGTAAATTCGAACGTTTTACTATAAGTTCGAGCGTTTGATT TGAAAAATTGGTAGATTTTTCCGTAGATGTTTCCCTGTACGTTTATTTTA GCCTGTACGTTTATTTATTTTAGCTCTGATTTCTCGCTTGTATGTTTATT TTGGTATGTACGTTTATTAGGCACCCAAGATTAGGCACCTGTAGCAATTG GTTTAGGAATAAAGTATTTTTAAAAAGAAAGTCAGAGAAAGGTGGTGCCA AATTTTTCAGATTTTTGCTGTAATTTGCTCAGCCCCAGGACTCAACCATG GGCGTTTAAGTATTCCAAGGGTGGAGGGTATTCCCTGAAATTCCAGAATA TTTTGGTCTGCAACTATTTAAAGGATAATTTTAGGTCTAGTCCCTGCACC TCTGAACAGGGGGAGTGGGTCTGGAGCTTCAGCGCAACCTTTTCGCGGAA AACGTGAAAAGTGTATTTAAAATTATCTGAAATAATTTCGTATTTTTTTA ATGATTTTTCATTTTTATTGATATTTTCATAGATGAAGTGTTTCAAACGA TTGTCAGTGATTACTTAGAACACAATAAGGGTAAGTATGCTCGCTATTCA TCGTACACCGAACCTACTATTAGGGGGTCAACCTTTAGGATCCGTGGGAC GCAACCGCATGTGGTTGGTTTCAAAATAAATAGGATTTAGTGAGAATAGT AAATAAAGACTGCTAACAATTTGGGTAGTTTCTTAAACCTTTGTGATCAT ACTCTAACTAATCTCCTTACTACTCCTTTCAATTTTCAAGTAGAGGTTTT ACGCACCCCTGTCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTAAA TAATTTTAAATCAAGTTATCAAATGTTTCACATTTTGTACATTATTCAAC ATTTTTAGTCTGCTCTGTTTCAGTACATCTCTTACATCTGTTAACCCACT TATTAAAGCGATCTAGCTAAGCTCTATTGGCTGACCTTCCAGCCTCGGCT GGATAATTTCGTATTTTTTTAATGATTTTTCAATTTTATTGATATTTTCA TAGATGAAGTGTTTCAAACGATTGTCAGTGATTACTTAGAACACAATAAG GGTAAGTATGCTCGCTATTCATCGTTCACCGAACCTACTATTAGGGGGTC AACCGTTAGGATCCGTGGGACGCAACCGCATGTAGTTAGTTTCAAAATAA ATAGGATTTAGTGAGAATAGTAAATAAAGACTGCTGACAATTTGGGTAGT TTCTTAAACCTTTGTGATCATACTCTAACTAATCTCCTTACTACTCCTTT CAATTTTCAAGTAGAGGTTTTACACACCCCTGTCTCATAGCCCCGGTGGA ACCTTTTCCCTCAGTGGGGTAAAAATTCCTATTGTAATTCCGATGGGGAT AGAAATTCTTTAGTTCCAAGGTTGAAAATTCCAGTGAGCAGGGAATTTCG AATGGGGATGAAATCAAAGTCAATTTCTCAATAGGGCTGAAATTCCAGGG TACTTTCCCACCAGGGACGAAATATTTTCCAAATTTTTCAATGGGGCTGG GGTCAAAGCGATTCTGTGAGACAGGGGTGTTTTTGCATTCTCTAGCACAA CTTTAGGCAATTGTTAACAAATCAAACCAGCTTAAAGAAATTTTTACGAG CTCTCACAGGAAATATAGCAACTTATTAAATATCTTTCTTTAGATATGCT AGAGGGACAAAATGAGGATATCACAATTCAACTTGCACCAACGAGTAACG ATGGTATACGGAATGCTTTTGCTCGTTTCCAACAAAAATGTTGCATGTAG TAGACATATGTGAAGTCAAATTGGCTTGGAAAGTATCCTCAACAAAAATT TCATCGTGTCATTTTTATGTGACATGTTAATTGTGGTAGAGGTCTGGGGC GTCAAATAATTCATTTCACAATTTTAGAGGTGCATATACACCTTGGTCAT TTTTCGGTGGAGATTGTTAAGTTTAAAGCTTCTCTACGTCACTCTTTCTG TCTTAAATTGTAGTCGTTTCATAGGGTTCAAAATTTGGAAGTATTTGCAT CCCCTTCATCCCCCTTTGAACATTACGGAATTACTTATTATAACGTATTA ACTTAGATTGAAAAGCACAAATTATTTATTTTGATAGAAAGTTTTTTAGA GAATGCATATATTTTATAACAAAGGTA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00071442TCONS_00071442Clytia hemisphaericatranscript
TCONS_00071441TCONS_00071441Clytia hemisphaericatranscript
TCONS_00071440TCONS_00071440Clytia hemisphaericatranscript
TCONS_00071439TCONS_00071439Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00071441-proteinTCONS_00071441-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_60supercontigscaffold_60:1411740..1418166 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
14.53 14.43 4.98 3.96 19.28 12.78 21.42 22.38 15 15.13 10.64 7.98 12.46 10.13 11.89 11.83 9.18 11.89 14.39 13.67 6.55 6.65 13.36 14.77 7.24 7.58 7.69 7.15 15.39 13.96