XLOC_042913 (gene) - C. hemisphaerica

Overview
NameXLOC_042913
Unique NameXLOC_042913
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_49:168482..176121-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_042913 ID=XLOC_042913|Name=XLOC_042913|organism=Clytia hemisphaerica|type=gene|length=7640bp|location=Sequence derived from alignment at scaffold_49:168482..176121- (Clytia hemisphaerica)
CCGATAAAACCTCTTTCAGCAACACGAATGCAATCAAAACAAAAATCTGC ATCTTCTTCCCAAAACAAAAAACTGAAATCCAAACGAAACTGTAATCAAA CAAAATACTTCTGATTATGAAAAGTAAATTTTTTTGATTCATCAACGTAC ATCAAATTAATCTTGTTTGCTATTTGCCCAGAAGACAATGGAGAGCGGTT TTCACACAAGCAGCATTTGTCAGCCCCTTTCTCACCACCATCATAATCAT AAAATGAATACCAAACGCTTTTAAAGATTTGATTGATGTGTCTAAAATAA GATGAAAGCAATCACACCAGTCTTTACGTTTTGCCAGTCAAGTAAGAATT CTCTGTGACGTGGAAGATGTTGCGCCAACTTTTATCAAAGAAAGTAAGGA AACAAAATATCCAGTCCCTTTTGTAAAATAAGTGTTTCAAAAGATTGTTT GATATATTTTTAAGGAGAAAATTTCATTCAATAATTTTTGAGAATATTAA AACCCCATCGAGAGTAAAATCAAAACAAAGAACAAAAGATAGAGACAAGA AAGTTAAAACAAATTGGATATCCTTCCAAAGCCTCATCTACTTTGACCCC AAATTTCTTTGTTTTCAAAGTTGCGGTGAGAATACATACACAAAAAGTAA TTCTATGTGAATAGAGAATTTTTCATGTTTGATAAAAGTTGACGTCAGTA GAAAGGAGACGATAATTTAAAATACATTGCTGGACATCTACATCTGGAGA GAGAGAACACTAAATTTTATCAACAATATTTTCATCAAGTTTTATTTCAA ACATTAACATAATTTACTTCACACTTTTAAAATTTTTGATCAAAGATATC ATCATTGTGTTATAGAAGTCACAGTTTTCAACTTCCAAAACATATTCCTT CGTGGAATAAGTAACTCTGTTCAATTTTTATCTAACCTTTCCAAGTAAGC TATCATTTATTCATTCTCTTACTCAACTTCTATTTGAATGGTTTCAACTC ACCAACACCCTGCTGTGGAATGTCTTAAAACCAATTCAATCTTTCTGACA AGCTGGTCGACGCTTTCTCCGTCAATTGAAAATTATTTTGCACAGAAACT GAAAAAGTCAACAGAAATAGGAAATAATTTCATTGATTTCCGACTTTTGA AAGTTTTGAAAACATCACAAGATTTTTAAAATGGTGTCGCTAAAAAATTT GAGTAGAAACTCTTCCTCAATTTGACATAACAAAGGTCTTCAACTTTTCA TGAAAAGCGAAAGCACGAGGGGCAGTATTTCATGGGAAAAACAAGAATTT TAAGTAGTCTTCTTTTTCTCCTTTCAGATTTGAAGTCGAAAATGAAGATT GCAAAATGAAGAAGGAAATTACCTTTGTCTTTATTATAGGTAAGTATCAC CTGTCAGTATTTCATATCTGTTATCTTTAGCATTTCGAAGAGTCATGTTT CCTTTAAACTTTTCAGCGCTTTTCTTTCAGTGGTGTTACTGGATGTTGTC AGGTGCAATGATGCAGAACTGAGGCTGTTTGAGAAATTATTCACAGGCTA TAACAACAAAGTGAGACCCATCAATGACAAATCGAAACCAGTCAACACAA CCCTGGATATTGCTTACGTACAGCTTGTCCAACTGGTAAGTGCTCTCATG TAACACGTTTTTTTATAAGCACATCCAAATTTTTTTAAGNAGAACAAAAG ATAGAGACAAGAAAGTTAAAACAAATTGGATATCCTTCCAAAGCCTCATC TACTTTGACCCCAAATTTCTTTGTTTTCAAAGTTGCGGTGAGAATACATA CACAAAAAGTAATTCTATGTGAATAGAGAATTTTTCATGTTTGATAAAAG TTGACGTCAGTAGAAAGGAGACGATAATTTAAAATACATTGCTGGACATC TACATCTGGAGAGAGAGAACACTAAATTTTATCAACAATATTTTCATCAA GTTTTATTTCAAACATTAACATAGTTACTTCACACTTTTAAAATTTTTGA TCAACGATATCATCATTGTGTTATAGAGGTCACAGTTTTCAACTTCCAAA ACATATTCCTTCGTGGAATAAGTAACTCTGTTCAATTTTTATCTAACCTT TCCAAGTAAGCTATCATTTATTCATTCTCTTAATCAACTTCTATTTGAAT AGTTTCAACTCACCAACACCCTGCTGTGGAATGTCTTAAAACCAATTCAA TCTTTCTGACAAGCTGGTCGACGCTTTCTCCGTCAATTGAAAATTATTTT GCACAGAAACTGAAAAAGTCAACAGAAATAGGAAATAATTTCATTGATTT CCGACTTTTGAAAGTTTTGAAAACATCACAAGATTTTTAAAATGGTGTCG CTAAAAAATTTGAGTAGAAACTCTTCCTCAATTTGACATAACAAAGGTCT TCAACTTTTCATGAAAAACGAAAGCACGAGGGGCAGTATTTCATGGGAAA AACATTCGCAAATAAAAATAATTTTAAGTAGTCTTCTTTTTCTCCTTTCA GATTTGAAGTCGAAAATGAAGATTGCAAAATGAAGAAGGAAATTACCTTT GTCTTTATTATAGGTAAGTATCACCTGTCAGTATTTCATATCTGTTATCT TTAGCATTTCGAAGAGTCATGTTTCCTTTAAACTTTTCAGCGCTTTTCTT TCAGTGGTGTTACTGGATGTTGTCAGTTGCAATGATGCAGAACTGAGGCT GTTTGAGAAATTATTCACAGGCTATAACAACAAAGTGAGACCCATCAATG ACAAATCAAAACCAGTCAACACAACCCTGGATATTGCTTACGTACAGCTT GTCCAACTGGTAAGTGCTCTCATGTAACACGTTTTTTTATAAGCACATCT AATTTTTTTTAAAGCCTTCGGATGTTCTTAAATTTTTAAGTTTCGAGCCT AAAAATGTTCTTAACATGTTCTTATTTCAACCAATTTTTGACCATTTTTA CCCATTTTCCTAAGAAATCGAGTGTTTTTGAGACCATAAAGCCTTAAATA GTTCCTATCTCGTTTTTAACATTTTGGCCGTCGAAGCCTTATGTTCTTAT ATAGTTTGTTCTTATAAAGAAAAAGGGTAACACCCCTGTGTCACCCACTG GGTCCCAACCCCACTGAAAGATTTGGCCAAAATTTCGTCTGTGGGAAAAA TGTCTTCCAATTTCATATCAGTCCCATTGGGAAATTGACTTTGATTTCAT CCCCATTTGAAATTCAATGTTTAGAAATTGCACTCCAAAACTATCCCCCT AGATTTTTCAAGCTTGGAGCAATAGAATTGTAGCCCCATTGGGATTTTGG TTAAAATTTTTATCCCTGNCTCCAAAACTATCCCCCTAGATTTTTCAAGC CTGGAGCAATAGAATTGTAGTTTTGGTTAAAATTTTTATCCCTGATGTGG GAAAAGGTTTCACCGGTACTGTGAGACAGGGATTTCACATGTAGGTTGTA AACGGCCCTATCAGGAAAAATATTAACCGCTCAAGAAGTCATGGATGCTT TCAAATAGGGCATGCAAAACAGTGCACTAAGATGTAAAAGTATGAAACAG TTTGGTCTAAACCTCAAGGCAAAAGAGTTAGCACCTGATATTGTATTTTA CAGACCGAAACAGACTTCTAATAAAACCTAAAATCAATTTTTTTTCTCCA AAGTATGCATACATATTGTTAGAAATCATTTTAAACTGATTCAGAAAAAT ATTACAACCTATTTCTGAAAATAAATTCATTCTAATAAATATTGAAAAAG TCTCATTTTACCTGAAAACATCTGAAAACTGAAAACATCGGTTGAAGTTA AAACATTACGGGCTTCATAAAGAATTTGTTCATACCATTTTCGATTCATG ATAAATCCAAGATCACAAAGTCCAATATTTCTAACAATTCTGTATTCGAG TTAAGTTGACTAAATAATTGTCCTTCTTTTTCCTTAGGATGATCGAGAAC AAACTTTGATCAGCAACGTCTGGGTGCGTCAGGTATGTCTTCCATAGTCT ACTTGAAATCGATATAAAACATATCTAACATTATCACCAACAACAAATTT TGAAAAGTTTCTTAAACTTGTGATTTCAGCACCATGGTAAAGTACCCTTA ACACACCCTTTTATTACAGTCCCGCACTGGAGAATTTTGGCCAAAATTTC TTTCCCGGTGGAAAAAATACCCTGCAATTTCACCCCTGGCAAATTGACTT TGATTTCACCACCTGGCAAATTGACTTTGATTTCATCCCCATTCGAAGTT TCAATTGAAAAAATTGCACCCAAAAACTATCTCTACTGGTTTTCTAAGCT GAGAATGATAGAAAATGTTTACCCACCCCCTTGTAGAAAACCGGGGCTGC GAGACAGGGGTGTATTAACTTCGGTTGAAAAAATACTAGACTCTAATTTA ATCAAATTGTTTATTTCCGAAAAAATATGGATCAAAGCCTTTTTAAATAA AGTTTTTTTAAATTCTTGATTGTCATTTCTTTGCGCAGAACTGGCAGAAT GACAAATTGACGTGGGATCCGAAGGACTTTGATAACATCACCGTCATTAA TGTTCATCCGTCAAAAGTTTGGCTGCCGGACGTCATTCTTTATAACAAGT ATCCGTCATTTTTTTCTTCAAAACCCTTTTTTAAAGTACAAATATGAGAA ATAAAATATGTTAGACTCGTTACTTTCGAGGATCTCCTCAAAAACAGCGG TAGAGGAGCAGAAAAAAAAACCACTAGCATAATTACCTTCTTAAGACACT ATTATTTCTTCATTTTTGTTTTTCAGCGCGAAGAGTGGCGTGGGAGCAGG CATGATGTATCGTTTCAAGACCAAAGTCTCCATTTTTCACAACGGACTTA ACAAATGGTATGGAATTAACTATTCATATGAAGAATGTCAAAATGATACT TGCTCGGAAGAATAATAATACTTCCTGACATTATGCAATTCCCCCATCTT TTTTCCAGGTACGCTCCAGCCATCGTTCGGAGCAGTTGTAGTATTGACAT CAAAAACTTCCCTTTCGACGAACAAAAATGTGACCTGGAGTTCGGTAGTT GGACGTATAATGGATATGAATTGGATTTGTTCTACGCCAATGACAAAGCT GACACTTCTTTCTATTTGGCAAGCGCTGAATTTGATTTGATTTCAGCCAA AGCCAAGCGATTCGTCAAAAGATACGAGTAAGAATCATTCCTTATTTAGA AAGAGTAAGCCTGGCCCGCAAATTCCTTCCTACCTTCTTCTATATAAAAA GCCTCAATTTTCATAGTACGAAGGACTTAGAAGATTTAGAACTTCTGTTC ATAAAGATTTCGAAATTCTTTGAGCTGAATATGGTTAAGCTTATTAAAAG ATCTTCCAAAAGATAAAAAAAAGCGAAGGCGCGCGTTGGCGAAGAGGGTC AACGGAAGGCTTATCTTGGCGTCTTTTCTATCTCTTTCAGATGTTGTCCA GAACCATACCCGAATATCATCTACACAGTGCACGTGCGTCGCCAACCTGG TTTCTTTCTCTTCAACGTCATCATCCCTAGCATGGTTATCACCTTCTTTG CTATTCTCACTTTCTCCTCCCCTCCCAACGTCGGAGAGCGCATCTCCCTG GCTATCGAATCTTTCCTGTCCTTGAGTTTCTTGTGTATGATGGTAGCGGA CAGTATACCGGTCAATTCGGATGTGTCTCCCCTCATCACCAACTTCTTGA TGGTGTGTATGATGCTCATCTCCTTGGCACTAGTTTTTAACATGATCTCC ATGAACCTGACTGGCACCAAACCCGTACCACGATGGTTACATACATTGGC TTTTGTCTACATTGGACCACTTGTTGGTTATTGCCGAGATACAAATGCCA CCACCAACAGTCTTGGACGATTCTTTTCATCACGCGTGCCAAGTAAAATC GAAAATAAAGTCAGGTTTATGATTCACAAGTTGCATACTCAGTTATCCGA GAAAAAATTGTATTACGGAGAGAAAATGTTGCGCCACCTTTGCCGTTCAG AACATTGCATGCCACAAAACAGGGAGGAGGGTCTTCACGAAGAGGAGAGA CAAAACATGCGACAAATCTTGAAACGCTCCTCCGTAGAGAACAATCAAAA GTTCAACCGTGATTTCTGGCGATGTATCGCACAAACTGTGGATCGTGTTT GCGTTGTCAGCTTCTCGACCAGTTTCTTGTTCGTCTCTGCCGCTGTCCTC ATGAAGGGGTATGGACACCAATTAGAATTACAAAAATAAAACAATAACAT CTNCCAGCCATCGTTCGGAGCAGTTGTAGTATTGACATCAAAAACTTCCC TTTCGACGAACAAAAATGTGACCTGGAGTTCGGTAGTTGGACGTATAATG GATATGAATTGGATTTGTTCTACGCCAATGACAAAGCTGACACTTCTTTC TATTTGGCAAGCGCTGAATTTGATTTGATTTCAGCCAAAGCCAAGCGATT CGTCAAAAGATACGAGTAAGAATCATTCCTTATTTAGAAAGAGTAAGCCT GGCCCGCAAATTCCTTCCTACCTTCTTCTATATAAAAAGCCTCAATTTTC ATAGTACGAAGGACTTAGAAGATTTAGAACTTCTGTTCATAAAGATTTCG AAATTCTTTGAGCTGAATATGGTTAAGCTTATTAAAAGATCTTCCAAAAG ATAAAAAAAAGCGAAGGCACGCGTAGGCGAAGAGGGTCAACGGAAGGCTT ATCTTGGCGTCTTTTCCATCTCTTTCAGATGTTGTCCAGAACCATACCCG AATATCATCTACACAGTGCACGTGCGTCGCCAACCTGGTTTCTTTCTCTT CAACGTCATCATCCCTAGCATGGTTATCACCTTCTTTGCTATTCTCACTT TCTCCTCTCCTCCCAACGTCGGAGAGCGCATCTCCCTGGCTATCGAATCT TTCCTGTCTTTGAGTTTCTTGTGTATGATGGTAGCGGACAGTATACCGGT CAATTCGGATGTGTCTCCCCTCATCACCAACTTCTTGATGGTGTGTATGA TGCTCATCTCCTTGGCACTAGTTTTTAACATGATCTCCATGAACCTGACT GGCACCAAACCCGTACCACGATGGTTACATACATTGGCTTTTGTCTACAT TGGACCACTTGTTGGTTATTGCCGAGATACAAATGCCACCACCAACAGTC TTGGACGATTCTTTTCATCACGCGTGCCAAGTAAAATCGAAAATAAAGTC AGGTTTATGATTCACAAGTTGCATACTCAGTTATCCGAGAAAAAATTGTA TTACGGAGAGAAAATGTTGCGCCACCTTTGCCGTTCAGAACATTGCATGC CACAAAACAGGGAGGAGGTTCTTCACGAAGAGGAGAGACAAAATATGCGA CAAATCTTGAAACGCTCCTCCGTAGAGAACAATCAAAAGTTCAACCGTGA TTTCTGGCGATGCATCGCACAAACTGTGGATCGTGTTTGCGTTGTCAGCT TCTCGACCAGTTTCTTGTTCGTCTCTGCCGCTGTCCTCATGAAGGGGTAT GGACACCAATTAGAATTACAAAAATAAAACAATAACATCTCACTTATAAT TATTTTTATCGTAAATACATTTGGTCAATTCCTTTACCGACCTATTAACA ATTGAGTTTAACTAAAGAGAAATACGTAAACATACCTCAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00068840TCONS_00068840Clytia hemisphaericatranscript
TCONS_00068839TCONS_00068839Clytia hemisphaericatranscript
TCONS_00068838TCONS_00068838Clytia hemisphaericatranscript
TCONS_00068837TCONS_00068837Clytia hemisphaericatranscript
TCONS_00068836TCONS_00068836Clytia hemisphaericatranscript
TCONS_00068835TCONS_00068835Clytia hemisphaericatranscript
TCONS_00068834TCONS_00068834Clytia hemisphaericatranscript
TCONS_00068833TCONS_00068833Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00068835-proteinTCONS_00068835-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_49supercontigscaffold_49:168482..176121 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 0.06 0 0.12 0.02 0.38 0.47 0.62 0.62 0.38 0.37 0.04 0.04 9.27 11.87 0.26 0.22 23.15 22.72 7.16 10.4 9.4 11.13 0.12 0.23 0.35 0.44