XLOC_040360 (gene) - C. hemisphaerica

Overview


Name	XLOC_040360
Unique Name	XLOC_040360
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at scaffold_412:90173..97778+

gene from alignment at scaffold_412:90173..97778+

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_040360 ID=XLOC_040360|Name=XLOC_040360|organism=Clytia hemisphaerica|type=gene|length=7606bp|location=Sequence derived from alignment at scaffold_412:90173..97778+ (Clytia hemisphaerica)
ATTTGTATCTTTTTTTCTAATGAGTTTGAGACCCAAgtcaattaaatttt
ttcgataatttttctgtttgaaaatttctcttCCTTCTTTGCAAACAGTG
GCAAAACCAGTAGGAAACAATACTTTTATTTCAGTGGATGGCacagagtt
ttttttttttgacaagaAGCAGTTGCGTCCTCACCCTGGCGGGTCTGAGA
AGATAATATCAATTTCCATTTCATTTCAACAGTAGAATCTAATAAACACA
TTGATTCGGACAACCTTCTTTTTGATGCATGTTCAAACCAGTGAATGTTG
ATTTTGTTGATAAAGGAGGTGCGCAGAAGCAAAGGAACCTTTATTTCTCA
GAAACAAGCAGCAAACAATCTGACGCTTTCACTGCTCACAAAGGTAACct
cttttttctctcttctcTCTTTTATGCACATAGATCGTTCCATGTGACAA
GAATTTTCGACTGAATTTATTTCGGGAAAGAAAAACCCGCTAGAAATATT
TAGCCTTGTTGATACATCATTTGTGTTTTTTTCGTTTATTTGCGATGAAA
ATAAGATTCATTCCAAACTGTATTATGCTGCGGTGTGACGAGTTATGAAA
GAAGACGCCATAAGCATGGATCTGATTTcaagaaaaagctttttttcatT
TGACACAATATTGTGAGGTTCAATGGGGGTGTGAATACTTTTGTCATAAT
CTGTCGCCATAAGCATGgatcaattaaaaagaaacaccaattaaaaagaa
acaccaattactctaaatttgagtctaaggtgGTCTTGTATGCCCCTGCG
GGCACGGTCACCATTGTTCTTTagatacaaaaaagtcaacaaacaactat
taaaaacaaacaaaaatgtgATGTGATGAATTATTGTCTCTGGGTGAGAC
ATCCTTATATACCCTGGTCGAACATTCTAATCGATGCAAAACACCTATCA
ATGGAAACTTGGAACCATCAACGTACGTACAGGACGAGAAGACCAAAAGC
TTGAACGAATTATTCGCGAAATCGATAAAGCAGATATCAGCATCTGTGCC
CTACAGGAAGTCAGACGTTTATCTCAAGGATCAGCTTNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNAACACAAATATCGCATCAACTTGAAAAGTCTCAC
CCGAACACAGCGGTACCAAATAcgaaataaaaacatccaaacgtTTGGAC
AAGCGGAACTCCCATGGATTGGGTATGCGGATGATTTAGTACTTTTCTTT
ACTGACAAAGAAAGTCTTTTATCTGGTTCTGAACTTCTATAAACCaagtt
ttcgaaagttttggGCTTTTAGTTAACAAACTCAAAACCAGAAACTATGG
TTCTGAATCACAAAACTCTTGAACAACACTATCACAACACAATCATCTCA
CTCGCCGAGACACCAATCAAAAACGTCACCAACTTCACATACCTTGGGTC
GATAATTAGTCATGACGAGCCCAATACCGGAAATGCAGAAGTCAATAATC
GTATTTAAATGGCATCTGCTAAATTCAACGAAATGTCTAACCTCCTTCAA
AATCAACGAATGAACCTTTGCACCCGAATGAACTTCCTCAATAGTTTTGT
GAGAAGTCGGCTTACGTACGCGTGTCAAAACTGGAACCTAAcgaaaaatg
aatttgaaagattgaaTGTTAGTTATCGTTCTTTTCTTCGGCGAATGATA
CGTAATGGTCGAAAGTTTGTAAATCCGACTGAAAATGATTATCGTTTGAT
TATATCTAATCAACGTCTGCACGAAATTTGTCAGACATGtgacttagaat
tttttataagagaTCAACAAAAGAACTATATGTCACATGTTATTCGAATG
AACACGGAACGTTCAATCAAGCAGCTGGCTTTTAACGATGATAAATATAC
AAAGAGAGGAAGGCCTGTGAGAACTCTACTCGACCAGGTCTTAGATAACT
TAGATATTTCTATTGATGAATTTTGcactcttgcccttaagggcaAGAAT
TAGAATTTGATGGAGAGATGTGTGACTGAGAAAATAGGGACTTATCCCAG
GTTTCCTCTCCTTGCACATTTTTCCATCTCTGTTTAACCTAGGAATAGGG
ATACagtaaattttatatatatatgtCTAAATAAGAGATTTTCGAGAGAT
TGTGATGAAAGTTCATCAAATATTGaacactttttcaaacttttgatttc
aaaatgaaattgttttaatAAACGATCAGTATGAATTCTGTGTTTGTAAT
TCGAGAAAGTTGGAAAAAATTGCTTTCATTAAGTGTTTGTTGGACCTGAG
AAATATAAAGTTCTTTTTGGGAGAGATGAAGTCTAGTGTTAGTATTTGGT
CGCTGAATGAGATGAGCTGTCGAGCGTGTGGGAGTGTTCCATTGCGTGAT
CACCTCACTACACCTGTCAATCCTCGCGTTGCCAGGGGTTTCGGCAAACT
CTCCTCTTCTGGTATTACAACGCGCGTGCAATACAATGACCTTTCCAACA
TCCATATCTCGCCCTTCAAAGGTCCTATATATGACCTTATTTTAattgta
tttttcaattttaaagcaTCATGATTATCAATCAATAAGCCATGCCAACa
tatataaatttttaaaaagatcattttgatAATGGTCATGGTACAGAATC
GCAAAAATGGttatcaaattcataaaaaagcGAATCCTTGGGGACTAGGT
ACGAGGTTTAACAATCTTTCAGGTGTAGTTAACAACCAACATCCTTGTAC
AAAATCTTTCCTGTGAACTTACAGAAACATTCTTTTCTTCTAGACACAGG
AAGGAGCAGCTTTGAACGATCATCCACAACTCACTCAACACAAAATGGAA
TCCAAAATCTCGCTTCTCATCTAAggttttttttcacacaaattTTAAAC
CGTCCTCTTTCTTCGGGCGGGAAGAAGTTTTGGCCAATTCGccaattttt
gtacaatttggacgaattaagaaaaatttaagtttgGCGTCGCGATGAAT
GATTTTGTAATGACTGGGCTAATTAAGGGTGTTGTCAGGAAAAATGAAAC
CAAAGTATTAAAACCTTTCAATGCCGGCAAAAATCCTGATATCCAattta
aagctgaaaattagaattttggGATCATCCATTTTATCCCTAATGATTAA
AAATAGATTTATTGAAGACAGGTGTTTTAAAGCTCTTACATACTTTCCTT
CTTTTCAGCACGAAATCGATCTTGGTCCCATCAACCACCACTACACCTCT
CCCGAAACACATCTCCGACAAACCACCATCTTGCATGATGACGTCACAGC
TCTTGAAATGCGATCCTCGACAACTGCTTGTGACAGGGTATCGTTCTGAT
GTCTTCACTTCCAGACCTTTTCTACCGGCgacgaaaagtttgaaaacaac
AACAGCGACCGCTTCTTCGTCTTACCATGGCAATAAGCAAACAACCCCAA
AAACTCATCACAGCTTCAGGTACCTAAATTGAGTTAGATTTAATTCATAG
TTTCATACTTTCACACCTAACACTTTGATCTACTTTAATAGGATGAATTT
TCGCGgcaacttaatttcgcggatgacattATCAGGGGACAGtaattttg
tgtcttttttacTGTCAAATTATACAtatggttgttgaaatacgtattat
tagcgcttctttgatgtcaGTTAACATTTTAAAGTAGTTATCcgacattt
tttgagttttgttcaaAAACATTTCGCCGATAAGACTATtccaaatttcc
agtttttgtAAGAATAAAGGTCTAACACTGTAAAGGTCTAACATTTCTCT
GCTCTCTTTAAAGGTGGAAAACCAAACCATCAAATACTGCACGAGGTATT
TTTTATCCTTCTCAAAAGCTTTATCTGTAGTTTGGGGTTCAGTTATTCAC
TCAACACTCGGAATAAGTACTTGGCACCCTGAACTGCAATCGTCTCACCT
CCCCGGTGGGAGGAGGGGGCACTCGActcaaaattaggcctttgaaatag
aacccttacagtgcagagataatttatgtaaatttgagtaaatttgaaca
aaaaatcgAGCATTCCAGcgtatttttttgaaacctttggagcattttta
ggcaaaaatttTCAGTGATCGAAATAGCGGTGGGTTATCGGTTGAAacca
acaagaaaaaaaatcaccgacccgaaaattttcggaaaatgtGAAAATAA
CCGACCAATATTTGTGTGAGCTAAACTAATCTTGATGATCAGTTATTCAT
GGAATATCTACTTTATGACTAGTTCCTTAGTTGTAACTTTCTTCTCTTAT
TTCTTGGTTACTTCAAACTCTAttacacctccttctcacagacccggtag
gattttttcaaccagtggggataaaaataacggaccaaattcgatgggga
ttgatatttccatagtttttatggctggggatttcaattcttttgttttc
aagtcaaagaATTCAGTAGGGATGGGAAAAATAGCATAATATTTTGCAGT
GAGGATTGGTTTATTTGATTTTTTTCATTGGGGAGAGAAATTGGAAGATA
ATTTTCCACCGGGGACGATATTTAGGCCAATTTTTCCAGTGGGAAGGGTT
CCCAGTGGGTCTGTGAGAAGGGGGTGTTCTATTGACTTTCTCCTCTAATT
TCTTCGTTACTTCGAATTCTATTCCTTCGTGACTTTCTCCTCTAATTTCT
TCGTTACTTCGAGCACTATTCCTTGCTAACTTTCCAATGCTTCAGTCTTA
AaaagtttggtatcgttggGAAGGTAGGAAGGAGCTTATTACCAAACGTT
TTAAAAGTTGAAGCATTGGCTGAGAAATAAACAAGCATAGTAAAATTTAG
TGCACatttatcgtgaatagactttcaTTTCTTCGATACTTTAAACCCTA
TAAAACTTTCTTCTTTAATTACTTCTTTTTATCTGGACTTAATTTAGCTT
TTTATTACTGATGTCAgtttgttttctgttttctgttaAGTTGAGAGATT
TATATGAACTAATTGACATGAAAATAAGGCTAAGGGTTAAAACAAGTGTT
TAAAAGCCAGCAAAAAAGACAAATTTTCGAAGTGTATATTAAATAACCGA
TCAGAAGGAAAACCTTATTTCGACCACTGCAAAATATGGttggattttac
aaattttacacccttagagtgcatttttctcatctttgctcatttcgaca
CTCACATTActctttgggaagcttggaaaaggaACCCTTAAGGACCGTAA
GTACGGTCGGTTGTTTATCTTGAGTGCCCCCCTCCCCGGTCTCACCTCCC
TTGAGAAGTTGATTTCTGAAAATAACCACCCATCTTATGTTTGATTAGTT
GAGGATGTTTAAATGATTTTCATTTGTAGTGAACAATTACCCAGACCCCA
TGTATAGTGCAGACTCAGCATTTTTACAGCGTGTGACGGAAATGGCCAGT
TTGGAGGTGGAAACTGTCAAAACTGAAAAGTGGAAGAAAATGCGACGAAA
ATAATAACTAAGAACAAACTGGTTTTTGAGATATTCGAGTTTGAACTCGA
Tgctatttttctaaatattataaatttctagatgtatattttgtataaaa
gAATTTATGTtggtaaaaaagaatttttatgtTGGTAAAAATGCAGAACG
AAAAAT

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00064371	TCONS_00064371	Clytia hemisphaerica	transcript
TCONS_00064372	TCONS_00064372	Clytia hemisphaerica	transcript
TCONS_00064373	TCONS_00064373	Clytia hemisphaerica	transcript
TCONS_00064374	TCONS_00064374	Clytia hemisphaerica	transcript
TCONS_00064375	TCONS_00064375	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
TCONS_00064375-protein	TCONS_00064375-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_412	supercontig	scaffold_412:90173..97778 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
58.25	52.47	15.77	11.37	42	33.76	75.25	86.75	67.34	64.32	39.97	43.95	5.41	6.79	6.39	7.96	19.39	17.12	5.15	5.02	19.17	20.32	29.71	29.34	90.62	71.5	5.56	5.53	11.36	12.8

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XLOC_040360 (gene) - C. hemisphaerica