XLOC_006390 (gene) - C. hemisphaerica

Overview
NameXLOC_006390
Unique NameXLOC_006390
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000127:409817..414852-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_006390 ID=XLOC_006390|Name=XLOC_006390|organism=Clytia hemisphaerica|type=gene|length=5036bp|location=Sequence derived from alignment at sc0000127:409817..414852- (Clytia hemisphaerica)
CCCTGATGAAGATGTTAAAAGGATACAGGAAAAGTGTGTGATCTAGGTAT AGGAAGTAATTTCTCGATATTACATTCCGATTTTGCCCTTGAAAACAGAA GCTGATATTCTGTAGAACAGCACAAACTTGTTGAACTAATCTAAATCGCG ATCCATAATATTTCATGTTATCTAACAGTTTATGCTGTATGTATTTACTT TTTATTTGGCCTAACCCTGTGTTTGTTCTAAATTCGCACAACAAACTTGC AAAGCTTGGTTATCTCAGTTGTAAGCATATTTTTCTTACTATCATAGGTC GGACCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTA TTTTCACTAAAAAGTGGTATTATATTTGCCAGACTTAATTTTTCTTTACT GTTTTCCTTCCCTTTTTACCATAAAAAATTTAGCCCGAAACCCTTGGGGG ATAGGCATTTTTAAAGGTTGGGGGGATGCCAAGAAGGGTGGGGAGCATTT AAGAAGGGGGGATCAGACCCCTTTCCGCACTATGTCTATACTGTTATTTA GAAAAACAATTTATTCAATAAGAAAAAAATGGGGAAGAAATCAAAAAAGT CAAATAAGCTTGAATCGTTGAAAGCAGCAATTGAAGAAGAAGAAAATAAA GAAGAAGAGGTCAAGGAAGATGAGCCAAAACTTGTGAAAAAGAGAAAAGG TTGGTTCAAACAGCACTCAATGTGTAGAAATCTGTTTCAGCATGTTTCAT GTTTTTAATCATTCCCCATTTTGAATCTATTCTTCATCTTACTTCAATTT GTTCATGGTTCTTCTGTCTAAGTTACAAAAATGAAAATGTAAAAGTAAAA ATTGTTGAATATATTACAAATTCACAAAAATAAAAATTACAAATTAACAG GACTGGCTTGAGAGTAAAGAGGAGGATAGGATTAAGGTATGGGAGACCTG TTGGGAGGAAGTATTTGAAGAAAAAAAAATGAAAAAAAATTTTAGTCTAT CACTTTTTTAATATAAAAAAATATTAGGAATTTATATTTTTATTATTTCT TACACATTAATTACCTGTATTTACTGTCTGTATTTATGTTGCTTTTAGGA AAGAAAGATGTGGCTGCCAAAATGAAGAATTTAGAACTGGGTGAGGATAG AGGTGCTGAACAATGTTTCGATTACGACAGCGAAGAAGAAACCGAAGAAC CAGATTATGCTGCTGAAACTGAAGATACTGGGGGTAAATATAATTTTTGT ATTCTGAGAGGGCTGGTACCGTTTACTGTTAGTTTGCCGTCACCCAACCT TACATTTTGGAGGTGGGTCTGTCGGTCAGTTAGAAAAATTTATTTTTGAA GATTTATGAAAATTCAGTTTATATTTAGGTAATTTTGAAGTAAAAACAAA AGAGCTAGAAATTAGTTCATGATTCTTAAAGTAATATAGAATGAGACAGA CACAATAGGGGTTTTGATTTGAAGAAAAGTAATTTTCTTTTTTTAAATGG CCATAGTCCAGCCTTATTTACAGTACTTCTAAAAAGTAATTAAGTCTCCA AGTAGTTATAGACAGTGCTAAACATTCCAACTTTTTTCTTCACCAGTGAA AATGTCACGTAAAGAAAAGAAGAAAGCTGCAAAACAGGTACTGATAGTTT TCTCTTGTGCATTTGTTGCAGAATTTTTGTGTTCTACAGATCTTTCATTA AAGATCGATCATTCTTATCTGAACAGAAAGCAACCATAGAGGTGTTTGAT GGTTTACTATCTTCTCTGGTATAATTGAGACTCTCGAAAATAAATGTAAA TAAATGTTCAAGAAAAGATCTGATTGATCAATAGGAAATACAACAAAGAT GTAGAAATAATATGTACAAAACACCCTAACTTTTTTGATAATATTTTCAT TTCAAGGCAAAATACGCCGCTGAACAAGCTGCAATGGAAAACGAAAGTCA ATTTTCTGTATCACAACAAGAACAAACATCAAAAGCAGCTGCTATCGAAA ATGCAACTGATATTAAGGTAACTTCTGTTTGGTAGCAAGAAATTTAGTAC ATTTTTGATTAAGATTTAATCAAATATTGAAGATTTGAAAAAGTTTCAAA ATCGAAAATTTTTTTCCAAAACACATTTTTTTCAGGTAGAAAAATTCAGC ATTGCAGCTAGAGGAAAAGACCTTTTTGTGAATGCAGATTTGACAATTAC ACAAGGTCGCCGATATGGTCTTGTTGGTCCTAATGGGTAAGCAGAAAACT TTCCACATTCTCAAAGAAGTGAGAACTTCGAATCATCTAATAAATCTTAC TGTTTGCAATGTGTCGAGACTTAAGTAACAGTTTTCCATTTTTTTAAGTG CAACCTTACCAAAAATTTAGTAGACTAAATATTTTAATAAAAACCATATG AAAGGCTAGATTCTTTGNTAAAACTTGTCAGCATTGGCTTAAAACTCACA TTATCTTTGTTTGCTGTACAGGAGAAACATCTTTTGAAAGCGCTCGAATC AAAAGACGAGAAGATCAGTGAAGATGCGAACAAACGATTGAAAGTTGTTT ATGCTGAAATGGAAGCTATCGGTGCTGACAAAGCCGAATCCAAAGCTAGG CGTATCTTATCTGTAAGAATCGTTTCAACCCTAACACTGTAAGAGGATTG GATTTCAAGTTTTCCCAGAGTCAAATGATGTCATAATGCATGTCTGTGTG CTGTGTTGTGAATAAGTGTCGGTGTAGTGAACAGACCTTTTCATAAATTA CGTCACGAACATCAATTGCCTCGTTTTGAAATTATTGCCATGGTGAATAA CTACCAGCGAATTTTATTAAAATTACTTCCTATTCATAAACAAATCATTT AATGTCTCAAGGGACATAATCACCATGATAATTGTTTGAATACGAGGCAA GTGATGTTCGTGACGTAATTTATAAAAAGGTCTATTAAGCCATTTGACCC AATTCCCTTTCATTATCGCTTTTGACAGAAAGATTTGATATAAGTGTACC AGCTGTTAGGCTTAAGTGGTTTACTCTGCCTTTCTTTCCTACTCCCCCTT TGGTGTCCATAATTTAGAGATCGTCTAGCTGAAGATAAAACAGAATGCTG AGGAAGCGTTCATTTTATCAAAGTTGAATTATCTATAAAAGTCTCGGAAG GATTTCCTTCTCAGTGAAGATGTTTGTCCGTCTCAAAATTCAGCATGATT CACAAAAATTTCAAGAATTTGTGCTAATTTGCAGTATAAAATCTATTTCC GCTTCAGAGGAAAAACCTTGCTCTGACAATGCTTTATAAAAATTGGTTCA ATTCAAATCTTTAAGCTGCAATTATAATATTTCAGTTCGAAATTATGCTA AACTAGGTCATAANATTGAGACTCTCGAAAATAAATGTAAATAAATGTTC AAGAAAAGATCTGATTGATCAATAGGAAATACAACAAAGATGTAGAAATA ATATGTACAAAACACCCTAACTTTTTTGATAATATTTTCATTTCAAGGCA AAATACGCCGCTGAACAAGCTGCAATGGAAAACGAAAGTCAATTTTCTGT GTCACAACAAGAACAAACATCAAAAGCAGCTGCTATCGAAAATGCAACTG ATATTAAGGTAACTTCTGTTTGGTAGCAAGAAATTTAGTACATTTTTTAT TAAGATTTAATCAAATTATTGAAGATTTGAAAAACTTTCAAAATCGAAAA TTCTTTTCTACACATTTTTTTCAGGTAGAAAAATTCAGCATTGCAGCTAG AGGAAAAGACCTTTTTGTGAATGCAGATTTGACAATTGCACAAGGTCGCC GATATGGTCTTGTTGGTCCTAATGGGTAAGCAGAAAACTTTCCACATTCT CAAAGAAGTGAGAACTTCGAATCATCTAATAAATCTTACTGTTTGCCTAG TTAGCAATGCGTCGCATGAAGACTTAAGTAACATTTTTCCATTTCTTTTA GTGCAACCTTACCAAAAATTTATTAGACTAAATATTTTGATAAAAACCAT ATGAAAGGCTAGATTCTTTCCCCACAGGAAAATATGTAAATACAATTTTC AACCTAAAAGATTTAAACCTTTTCCATTGGTTAACAAACACTGTGGTTTC AACTCACATAAAGGCTTTGTTTGTTTAACACATCCTTATCTTCAGAGAGT TATACCACCTAGTGTTTTCACAGAATTCTGGCGTCATGCAGTTGCAAGAA TGATGCTTTTCATTAACACTGATCATAATTCCATTTCATTGTTTTTTTTC TTTCAGCATGGGAAAGACAACACTGCTGGTACATATTGCACGACGTTTGA TCAAAATTCCACCCAATATTGATGTGTTGTTGTGCGAACAAGGTCAGATT ATTGCCCATGAGCTATTCACAATATGAACCACTGCAATGACTCTAGAAAT ATTTATGGAGTTATACTTTGATATAAATTTTGATATTGATGATGATTTCT TTATGAATAAGTCGAGTCTTGCGCTCAAAGTTTCTCAAAGGTATTACCAC TTTTTCATTTCCTTTACATAATGATTCGAACAAAGATGACCTTTTTCATT CAATAGATATTCAAGTAGATGAAACACCTGCTGTTGATATGGTCTTGAAA GCTGACAAAAAACGTTTAGAACTTCTTGCAGAGGTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00011397TCONS_00011397Clytia hemisphaericatranscript
TCONS_00011396TCONS_00011396Clytia hemisphaericatranscript
TCONS_00011395TCONS_00011395Clytia hemisphaericatranscript
TCONS_00011394TCONS_00011394Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00011396-proteinTCONS_00011396-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000127supercontigsc0000127:409817..414852 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
78.5 77.52 20.9 13.14 47.46 37.76 73.66 83.24 86.44 81.21 92.31 98.64 91 90.23 107.47 113 87.58 93.93 61.85 59.44 61.09 59.25 76.16 72.63 64.35 67.18 55.41 52.04 53.9 50.27