XLOC_004921 (gene) - C. hemisphaerica

Overview
NameXLOC_004921
Unique NameXLOC_004921
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000087:376084..381067-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_004921 ID=XLOC_004921|Name=XLOC_004921|organism=Clytia hemisphaerica|type=gene|length=4984bp|location=Sequence derived from alignment at sc0000087:376084..381067- (Clytia hemisphaerica)
AAAAGTTTTACAGATGGCACGAAGTTTGTCAAAAATATTACACATCCATA GGTCAAAGAATACAGTTATTATAAAGGGCGAAAAAATCAAGAACTTGGTT TGTTTTTGTGTCACAAAAAGATGACTGAGGGAGATTAGAAAAATAGAGAC ATAAAACAAACCGAGACGAAATGACATTTTTAGAATGAGTACAGTTTCAG AAAAAATTTCAAGAAGGACAGGCCATTATCCATACCAGCATGTAGCTTTT CAAAGTTATATCAAGAATTCATTGACTTCAAATCTGTACCGTCCTAAAAA TCTGACCTACACAGACAAGAGGATTATAGTTGGTTTTGCGACAGAGGGAA GTTCTTCCTCAGAAGAAGAAGACTTCACAGAAGATTTCAGTTGGGAGAAT CTACAACACCGCACTGAAAAACATCAAATCGAGGCTGACCCGACATCATT CACAATGAAAATAATATCAAGTTTAGAAGAGAATCATTCGTTCGTTTTAA AGCGACGTCTTCTCATCATGGCCTTCATTTTTCGCATGTTTCTTATCGGA GTTCAATATTCAGTGATTTTACCAACTTGTATGCTGTATATGAAAAAATT TGGTGTCGGCGAAACTTTCACCGGGACTGTCATTGCAGCTTATCCGTTCG CTAGCATGATTTCAGCTTTCGTTGTTGGCTACGCATACAACAAGACAAGA CGAGTCAAAGAGATCATATTGATTATGAATACTTTTCAGATCATCGGTAA TATCGTTTACGCGCTACCCTACTCGCCGTTTTTACCACTCGCGGGACGTT TTATTTGTGGACTTGGGGATAGCTTTATTGGTGCTACCATTGGTAAGATT CAATTTAGTATCCATACCTTAGGTCTCTTTNTAGGGAGCAGATTTTTATG ACACTGTAATTATCTATTCATGGTATTAAAAGATAATTATAATGGCATAA AAATCTGCTCTCCTACAAAAATTTTGCGCCCCTCTTGGCTACGCTACTGA ACCAGCTCTTGTTTTTTTGAACGATAAACATACTTATTCATGAGGGTTTT ACGTGTACATTGATAACATTAAAAAACAGCCTATTTTTAAATAGCTCAGT CAATCATTGGGACCCTAAAAGCTAATGAATTTTCGATGAAATTTTATAAA ATGTCAAGCTTACAGTAGACAATAGTTTTTCGAAAAAATTCAAAGTGAGA ATTTCAAAAAATTTGTAAAAACAAATTTTCTTTTTTTAGTGAATAGGAAA TAACAGTGAACTGTTCTCGAAAAAAAAAAAAATACATAAAAATGGAATAT TTAGAAGAAAAAGACAAAACTTTTATAGACTTAAAATTAAACAAAAGTTT TACAGATGGCACGAAGTTTGTCAAAAATATTACACATCCATAGGTCAAAG AATACAGTTATTATAAAGGGCGAAAAAATCAAGAACTTGGTTTGTTTTTG TGTCACAAAAAGATGACTGAGGGAGATTAGAAAAGTAGAGACATAAAACA AACCGAGACGAAATGACTTTTGTAGAATGGGTACAGTTTCTGAAACAATT TCAAGAAAGACAGGTCATTATCCATACCAGCATGTAGCTTTTCAAAGTTA TATCAAGAATTCATTGACTTCAAATCTGTACCGTCCTAAAAATCTGACCT ACACAAACAAGAGGATTATAGTCGGTTTTGCGACAGAGGGAAGTTCTTCC TCAGAAGAAGAAGAAGAAGACTTCACAGAAGATTTCAGTTGGGAGAATCT ACAACACCGCACTGAAAAACACCTAATCGAGGCTGACCCAACATCATTCA CAATGAAAATAATATCAAGTTTAGAAGAGAATCATTCGTTCGTTTTAAAG CGACGTCTTCTTATTATGGCCTTCATTTTTCGCATGTTTCTTATCGGAGT TCAATATTCAGTGATTTTACCAACTTGTATGCTGTATATGAAAAAATTCN CATTCGAGCCTTATCAATCGTTACTGTAGGGCAAGTTGAACGTGTCAAGT TCGTGATATCATCGGGTAGTTTTTGATAGGCAATACCATTTAGGTAAAAT ATATACCAACAGTAGCGTAGCCAAGAGGAGCGCAGAATTTGTGTAGGGAG CAGATTTTTATGACACTGTAATTATCTATTCATGGTATTAAAAGATAATT ATAATGGCATAAAAATCTGCTCTCCTACAAAAATTTTGCGCCCCTCTTGG CTACGCTACTGAACCAGCTCTTGTTTTTTTGAACGATAAACATACTTATT CATGAGGGTTTTACGTGTACATTGATAACATTAAAAAACAGCCTATTTTT AAATAGCTCAGTCAATCATTGGGACCCTAAAAGCTAATGAATTTTCGATG AAATTTTATAAAATGTCAAGCTTACAGTAGACAATAGTTTTTCGAAAAAA TTCAAAGTGAGAATTTCAAAAAATTTGTAAAAACAAATTTTCTTTTTTTA GTTAATAGGAAATAACAGTGAACTGTTCTCGAAAAAAAAAATACATAAAA ATGGAATATTTAGAAGAAAAAGACAAAACTTTTATAGACTTAAAATTAAA CAAAAGTTTTACAGATGGCACGAAGTTTGTCAAAAATATTACACATCCAT AGGTCAAAGAATACAGTTATTATAAAGGGCGAAAAAATCAAGAACTTGGT TTGTTTTTGTGTCACAAAAAGATGACTGAGGGAGATTAGAAAAATAGAGA CATAAAACAAACCGAGACGAAATGACATTTTTAGAATGAGTACAGTTTCA GAAAAAATTTCAAGAAGGACAGGCCATTATCCATACCAGCATGTAGCTTT TCAAAGTTATATCAAGAATTCATTGACTTCAAATCTGTACCGTCCTAAAA ATCTGACCTACACAGACAAGAGGATTATAGTTGGTTTTGCGACAGAGGGA AGTTCTTCCTCAGAAGAAGAAGACTTCACAGAAGATTTCAGTTGGGAGAA TCTACAACACCGCACTGAAAAACATCAAATCGAGGCTGACCCGACATCAT TCACAATGAAAATAATATCAAGTTTAGAAGAGAATCATTCGTTCGTTTTA AAGCGACGTCTTCTCATCATGGCCTTCATTTTTCGCATGTTTCTTATCGG AGTTCAATATTCAGTGATTTTACCAACTTGTATGCTGTATATGAAAAAAT TTGGTGTCGGCGAAACTTTCACCGGGACTGTCATTGCAGCTTATCCGTTC GCTAGCATGATTTCAGCTTTCGTTGTTGGCTACGCATACAACAAGACAAG ACGAGTCAAAGAGATCATATTGATTATGAATACTTTTCAGATCATCGGTA ATATCGTTTACGCGCTACCCTACTCGCCGTTTTTACCACTCGCGGGACGT TTTATTTGTGGACTTGGGGATAGCTTTATTGGTGCTACCATTGGTAAGAT TCAATTTAGTATCCATACCTTAGGTCTCTTTATATTTTCTTTAAAAATTC AATTGGATTCTTAGAAATAAACAGAAATACAGAATGTATGATTAAAAGAA AAATATATTTTTTTATTTTTATTCTATCGGGTTATTCCAGTAAAAACATT ACCCCTCCCCATGTTGATGAAGTATAAGTTTTCACCGTCGAGGTTGATGC CCTCAAATGATTTAACTTTTCTTAGGGTCCCTTAAAACATAGGCAATTCC ATGGAGGTCTCTCAAAATCTGAGCGAAAATGCAAGTCAAAAAAGTTTAAA AACACAGAAATTAAGTTTTCCCAGTCGTCTACATTAATTAATTTGAATTT CTCTTTCCTCTTATAAGGTGAGATTTGCGAGTTATATCCAAAGACCCACC GTACGGGTATCATATCCTTGATCGAGTTTGGCCGTATCTTTGGTTTTATG TTAGGTCCATTACTCCATATGGTCATACAACGAAAGCGGTATCAGCTTGG TGGTATCGAATTCGATAGTACCACGTTCCCAGGGCTTGCCATGACTTGTT TTTGGATCATCATGCAGTTGGTGACGCTATTCTGGGTCCGCAATCTTGCA AAATCCATTCGCGAGAATCCTGAGTTGATGGATGAAAGAGATAAAGAGTT TTCCTTCACCGATAAAGCAACAGAAGAAGAAAAAAAGCTTCTGTCTGAAG AAAATGTAAAGTCACGTGATCAAAAAATGTCTAATCACCATGGCAACAAG GAGGAAGAAAAACCAACTTATCTTAATAATAACAACAAAGAGAGACGCAC GCAACCAAATATTTTTGAAGAGATTTCACGTCTCTGTACGGCTAATGTCA TCGTCATATTCTACCTGGATACGGTGCTATGGCTTGCTCAATCCGTTTTC GAATTCTTGTTACCACTTATTGCGGAATTTGAATACGGTTGGACACCTTT CCAAACGGGCGTGGTTTACATGGCAGGTGGCATCGAACTCATCATGGTTT TCGGCTACTTGTATTACATCAGTAAACGTAATAATTTTCGCGATACTTAT CTCATTTTATGGTCGTTGGTAATGACTCTATTATCCTTAATGCTGCTCAT TTTTGAGCGTTTAATGCCGAAAACAAGTCAAAAAATTGGTATGTTTGTCA CAATTTGCGGGTTGATGTTCGTCGCTGTCCCGTTAAACCTGACCGGTGTA AAATCTCTACTCTCCAAAATCACACGACCTGAGTTTCAAGGTATCACTCA AGGTCTTTACGGTTCGGTTTGTAGTTTTTCACTCATCATAGGGCCTATGT TGGGTAGTCTCATTTATAAGCATCGAGCGGAATATGGCGGAGTGACAGCC ATGTTGTCTATCACCTGCATCTTAGCATTGTGTGTTTGTATGGAGAAAAT CCATGATCGGGAAGATCAAATCACAATAGAAACTGAAAACCAAGAATTCC TTAAAGATCTTGCTACCTTTAGAAGTTGAAATCATAAAAAATACGAAAAT GACACAACATCAGGCAATGCAGATCTGTAGTAATACTTGAAGTCAAAACA ACGAACATTTGACGTTCATAACGGTCGTCGAAAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00008782TCONS_00008782Clytia hemisphaericatranscript
TCONS_00008781TCONS_00008781Clytia hemisphaericatranscript
TCONS_00008780TCONS_00008780Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00008781-proteinTCONS_00008781-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000087supercontigsc0000087:376084..381067 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.06 0.04 0.22 0.24 0 0 0.06 0.05 0 0.02 0 0 0.03 0 0 0.01 0.92 1.53 0.08 0.02 2.21 1.97 0.8 1.21 1.63 3.88 0 0 0 0