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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00008781-protein ID=TCONS_00008781-protein|Name=TCONS_00008781-protein|organism=Clytia hemisphaerica|type=polypeptide|length=576bp
PYQHVAFQSYIKNSLTSNLYRPKNLTYTNKRIIVGFATEGSSSSEEEEED
FTEDFSWENLQHRTEKHLIEADPTSFTMKIISSLEENHSFVLKRRLLIMA
FIFRMFLIGVQYSVILPTCMLYMKKFGVGETFTGTVIAAYPFASMISAFV
VGYAYNKTRRVKEIILIMNTFQIIGNIVYALPYSPFLPLAGRFICGLGDS
FIGATIGEICELYPKTHRTGIISLIEFGRIFGFMLGPLLHMVIQRKRYQL
GGIEFDSTTFPGLAMTCFWIIMQLVTLFWVRNLAKSIRENPELMDERDKE
FSFTDKATEEEKKLLSEENVKSRDQKMSNHHGNKEEEKPTYLNNNNKERR
TQPNIFEEISRLCTANVIVIFYLDTVLWLAQSVFEFLLPLIAEFEYGWTP
FQTGVVYMAGGIELIMVFGYLYYISKRNNFRDTYLILWSLVMTLLSLMLL
IFERLMPKTSQKIGMFVTICGLMFVAVPLNLTGVKSLLSKITRPEFQGIT
QGLYGSVCSFSLIIGPMLGSLIYKHRAEYGGVTAMLSITCILALCVCMEK
IHDREDQITIETENQEFLKDLATFRS Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0055085 |
transmembrane transport |
| cellular_component |
GO:0016021 |
integral component of membrane |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR011701 | Major facilitator superfamily | PFAM | PF07690 | MFS_1 | coord: 105..516
e-value: 5.4E-30
score: 104.4 |
| None | No IPR available | GENE3D | 1.20.1250.20 | | coord: 81..328
e-value: 1.3E-22
score: 79.5
coord: 342..567
e-value: 1.4E-17
score: 63.1 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 308..347 |
| IPR020846 | Major facilitator superfamily domain | PROSITE | PS50850 | MFS | coord: 97..555
score: 12.654 |
| IPR020846 | Major facilitator superfamily domain | CDD | cd06174 | MFS | coord: 97..548
e-value: 4.56825E-18
score: 83.5173 |
| IPR020846 | Major facilitator superfamily domain | SUPERFAMILY | 103473 | MFS general substrate transporter | coord: 347..547
coord: 93..295 |
Blast
The following BLAST results are available for this feature:
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