XLOC_002835 (gene) - C. hemisphaerica

Overview
NameXLOC_002835
Unique NameXLOC_002835
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000050:469602..477751+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_002835 ID=XLOC_002835|Name=XLOC_002835|organism=Clytia hemisphaerica|type=gene|length=8150bp|location=Sequence derived from alignment at sc0000050:469602..477751+ (Clytia hemisphaerica)
TGGGATAGGACTAAGTTGTTAATATTTTGAGCGATAGgaggaaaaaaagg aaaagtttGATATTTTAGAAGAAGTGTAACTAGCGGCAAAAAAGGATAAA ATGCTTCACAATAATCAAGTTCTTTTGGTTTTTATGGGCCTTTGTTTTTT CTGGTTTGTGAATTGTAACAGGTATGTCTTAAGAATACATCCCCTTCTCA GGGACCCGACAGGATTTTTTCAGCTAGTGGGAGTAAAAATAACGGAATGG AACTCgattgggattgatattcccatatttttatatccattgttttcaat tcagaaaattcagtggggatgggaaaaataatataatatttaGCAGTGAG AATATAATGGGACAAAAATTTTAGCATAATTTTCAAcgggggacaatatt ttggccaattttttcagtgggaagggatcccagtggatctgtgagaaggg ggtgttataaaAGTTTCAATCAGTTCTACCAGGGATAGATTTTTGTTTAA TCTTTCCATCTTGAGATGGGATgcaataaaagagaaaaatattttgaatc gTTACATATAGAAAGTAGGCCTTGGAGGGTAGCCCACTCGAGTGataaaa aacaactaaaaacgggttttttgacTCCAACGCTACTTTCTAtaggctat aacttttgatgcaagGAAAAAAGACTGTATagcacacccctgtgtcacag acccgctgggacctcagccccactggaaattcAATGcttaaaattgcact ccaaaaccatccccactagatttttaaccttggaacaatataatttctat ccccattgagattttaaaaggagtttttatcccaactgaggaaaaaaatt ttcccggggctgtgagacaggggtgttagtAGGCTTCAGAGTATCTCTGT GCCAAAATGTTTCTAGCACTAACGGATAtgtattctttttcttcttcttt tttcatcttcaaaatcttcttagtcatatttttctcaaaaattatagtgc tcttaattatctttttaacggtGTACAAATGTTACAACTGAAGCATTCGT TGATAAATAACAGGCAAAACAAAAGTTAGTGTGAATGGATTTtagaatat atatatttttcaaaattatgttTCAGGCCAAAGTTAAACTCAACCACTAA AGAgacaaaggaagaaaaaatagaccgagaagaaatatttttggctcaaa attttGATCACTTGCTCAATcaatatgataaaaatattcGACCAAATTAC ACAGGTAATTTTAGAttgtatattataaaattgatcaaattattCCTCAG GNAAATATTCGACCAAATTATACAGGTAATTTTAGAttgtatattataaa attggtcaaattattcCTCAGGGAGCAAGGGAGATTGCTTTCgatttagg ggggggggaggtCCCCTTTTTCAGACCAGAATTATCTATCGGCATTTGTA AATTTTCTATTCTGTTGTATTTCAACGGGTAAAATTCCAAATTTCGAATA CATTACCTATATTCAAGGcagtttaaatttcatttttccaaatatcATGG CCAGGATTGTAGAGCTTTTAgaagaaatagagaaaaattgaTCACGAGCA CATCTGAGATCTCTACATAGTAGAATATTtgtatgtttttgtttgttaCT AGGGAAACCAATCGTGGTGACAGTGGATTTGACTGTTATGGCGTTCGGTG CAATCAATGAGAGAGGAATGGTATTCTCacgtttgaatgtttttttataa gaatcaataaactttgaaatatagccgaaaattgttcttatttttagaat ACTTAAATGAGATAAATTTTCGCAGGAATCATATTTcacggttgagctca tccgcgaaatttcaaGATTAATTTTGCGAATGGCACTGTagaattttgag cttttttacGCCAAATTATGAATGTTGGTTGTCGAAATACCCATCAtaag cgcttctttgatgccagtagacattattttaaaatttttttgagtttttc tcaaaaattactTTGCAAATAAGACCTGATTTCCATTGGGATTTAATTCT GCGAGATCCCGCGAGATTtgatccccgcgaaagtttatcccatcaaaata ttctaaaaataatATGCTTAATTGATAACGAAGGACTTTTTATAACCCAT CAGCGTAATAAATATTCCATAATAATCAGATAATAGAATCAGATAACAGC AGGTGACCTTGTTGCCGAGAGGGGGTTTAGTCGCGAGAATTAAGGAGTTG GTCCTACGATACTGttgcaaaagtcaaaaacaaatTACGAGTGGTGTTTA TATTAGAGACTTTCTTATTTTTGTATCAAAACTACTTTTAGACATTTGCC ACTGATTTATATTTCCGACAAACCTGGCAAGACTATCGTTTACAGCATAA AGCCGGGACCGTATTAACGCCCTTATTAGGGCGGAAAATACCGACTGATT TCATATGGACACCAGATACGGTGATTTCAAATTCAGTCAAAACACGCAAA CATAAAGTGACGACCAACAATGAGAAATTGGATATTTACCCAAATGGAAC AGTGTTTTGGGGAAGCAGGTATTATATTGCTATACTATCAATTCAACATT TGAGGATGGGGTTAGTAAAATTAGTTGATGTTAGACCTTAATCGATTTGT CAATTTAAACAGCTTGAAAATGCAATTGCTGCTTCCCCCGCCTTAATCCT TCCaatcaaatgtttttcattgatGTCACGAGGGAATTTACAATACGGAA GGTCATTTATCAAGGCTTTCTTATTTCTAGAATCACCGTGATATCGAAAT GCAAAATGGATTTTCGGAATTACCCGATGGATATCCAAAGCTGTTCTTTG GTCATCAATAGTTGTAAGTTCCTCCTATATCACCATGTGATGTATATTTA CTTGTGATCGTTAAAAGGCTTTTCTCGGAGAGATCACCCTCCAACAACTT TGCTTCGAAAGACATAGCATAAAGCTTGACACAAGTTTAAGAAATCAATC AACTCAAAACACTAGTGTCGCTCATTTTATCGTTCGTTTAATTCCAAGGG AAGGGGAATAGCTCCATTTCCTCACATCCACGAATggttttcatttcttt tgaaaatatccGTTTAGAATTTTCGTTTAATTTCTCTGAGTTATTGCTGA AAACAGGATTAAAGTGCAATAACTTAGTGGGTCCTTAATGGGCCCCAGCG AGCTATTTTGAGTCGTGGGGGCCaatattttggagaaaaaaatatcGTCC ACCATGTTTGGGCGAGGAGGAAAATTTTTCAcgttttacaccctcaaaac accttaaaaagTTATCTaaattggggagaataatagtttttatggcttaa aatagtaactttaaaaaaagtatgGCATGGTCTGCAAGAGGGGTTAATAT CTATTCTTCAGATAATTTGCCAGATTTCAGTCTCACGTTATAAAATTACC TTCTTTAGATGCATACTTGAAAGAACATTTGGAATACAAATGGAAACAAG ACAAGGTTAGCATACAGTCAGAAGAAATGGCTCAATATACTGTCAAAAGT GCATACAACCTCAGAAGAAATGCTAACTTCTCAGATTTAGGTATATTCAT TTCTACACCATTCAGTGTCGCAGCTacagaaacaaaacaaaagcaaattt CCCCTTTTCCCCCATTTTCAATGTTCAATGAACGATGGGTTGGCGGTGCA CACTGAACATTGCAATGGGGTAAGGGGGTCTGTTTTCTACAATCTTACTG CAATTTGCTATGTCTTAAACATTCTTTCCCATGATTGGGGGGGGGGGGNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNggaaaacggtatttc gaacccctacaaacccccatGATTTGATTGTATAGTTGTATTTCTTGTTA TGAGAGCGTCAAATATGTATCGTTGAAGTCCTCGCGTGGGATAGGTTTTA AGGCTAGAATAATATGCTTTTATTTTCATCCTTGAATTTTTTCGTGTgta tttcatttatatttcatcCTTTTAGGCACGTTTTCAGAATTGGTGGTAAC ATTTACATTTGCTCGACAGATTTCAGTGACCATCATCCAGTTGTTTTTCC CAGCCACCGCTATTGTGTCGGTATCGTGGGTTTCACTGTGGATTCACAAG AACTGTGTCTCTGCTAGAGTCGGTAGGttgaaatctttatttttatctta tCGGCGGTCGGTCCCTATCAGGTTATCTATGTAACAGATTCAAAAATCTc tagggaaatttcaaactctttgCTGTCATAAGTCGAAACAGATATAAACA GAGTCATAAACAGATATAAAATATAAACCTCTGAAGTACTCTGGCACAGA CTACTTATATGTTCACTGCTAAATCTTGAGCCTTTTTAACTACTAGACCA ACAaataaaacagacaaaaattaaaatcgaGTCAAATTCAAACTTGTTTA AAACGTATTTGGAGGTTTCATAgttgatattgtcgatttactctgacaaa aatgcaatttttcagaACCTATTTTCAGGGTGAacatctttttttcattt tcttaacgAATTATTagtaaatatttattttgcaGAACTAATTCTCAATG TATGCACCGAATTCTGTAACTTTAGATTTTTCCTACGAAAATTAGTTAGT GCATTCAAAAGGTGTCGCTTTTGATAGAAATGCCACCAGACTGAAAGCCA TTAACGAAAAGAAAGATATATATCGAGGTATCGTTTTCATGACTCGAAGC TCTATAACAAGTTGTCCCTTCGCAGTTCACAATGCTTTacaaaccttact ccataactcgaacaaattttgtgttctccgtgcgtgttcgagttattgag ACTCCATTGTATTTGGGTCTTGATCAGATGAAAGCTAGGCTCGTTTCGGg tgtaaaactcctactcttcgggatatgcgcactgctcttgttttgaatat tgaattgcTTCGGatacatcgcatgcgcactgaggttttgatgaaacaat agagagtttcgaaagcTACCCCACTAAAAAGTGAAtccccggtgggggtc actagtggccgcccaTAGCACAGCAGTGTCTATAGACCAAAAGTAAGGAT TAAAAAAGCCtagagctgtctattgtgtagactaatgAAAACAACTCTTA CCATTTGTCTAATTCTTTTTTTCCCAGCATTATGCGTAACAACGATGCTA ACAATCTGTGCTTTCTGGGGCTCAGTGAATCGTCAGCTGCCACGTGTCAA TTATCCAAAAGCTGTTGACTACTATTTCATAGTATCGTTCCTATTCATTA TGTTAACTCTGGTCGAATTCAccattgttttgaattttgattttgattct cTGAAAACGAAATCGGTGAAAAAGCAATCTGGTAAAGACACATTGAAACG AGAAAATAGTTTACGAAATCAGTTACCGGTATGTATCTaccattttcata ttttgaaaagttttcattaCTTGTCTATTGCGGAAAAAGTTTTTACCCTC GTGTTGAAAAGGTGCTCTTTGGAAAGACAGCCCCCTTGGTCTTTACAGTG GGCAAATATTTATGGTAGCCAACTTGGATTAAAATTTCATAGACCAGACC CTTCCGTAAATTGGTCTATTCATCCCTCATGTAATTCCGACAACCTTCAT AAAGTAAGATTTAGAAAGGCCGGAATCACTTATTGAAAAAAGAGAAACCT TTTCCCCGACTCTTTATTAGCTATCAGCAATTCCGATCTTTTATTATTCC CAGGTTTAAAGAAGGATATCGGAATCCTCCAAGAAAGGATTGTGAAGTGA TTATCTCCCATTAGAACTTTAGATCAATCATAATTTGATGAAAAGAAGGA TTCTGAAATTTCTTTTCGAAAGTGATGAGGAAGGACTTTCTCGTGACGCA ATTAAACAAAAAGCCTATCAAGGAAAGAAAAGCCTCGCCTGCCCAACATA ACAAtgcaaaatacaccttttcgtcCGTAGCTGCCAATTGCTGCACGGga attttttgtccgttttaccaccctaaaattGTTCCAGTCCTTTTTTTGCA CTTAAAGACAATAgacaaaagtgtaaaaaaggattggatcgataGTTGac ggtggtaaattaaataataaagtagcacgcgcctgaccgcgcgattacgg tcgaaaaggtgtatagaaAGTAACTTTAATTTAATTTCTTATTTCAGAAG CACACTCACCATGTATTACGCCGAAAGATCAGCCGTTTGGATGCAAATGT CTTACAAGGAGATCTAGTCTGTGAAATAGACAACACAGGGCGAACAGTAC ATTACTCATTGGCCAAAAAGGAGCAATGGAAAAAACCAAAagttgataaa aacaaaatgcCGTATTTCTTTAAATATTATCCGGTGACAGGGAAGCCGGC GACTTTGGATGTGATCGCCAGGTTCTTATTCccctttgtttatttttgtt ttaatgtgattttttggaaaacatacAGTTTGTAAAAGATTGACATTTCA ATATTCTTCAATGTACTTCGACAAAGAGTTGTATTACAAATTCGAGCTGT ATCAAAAGTTTGTCAATTTCGACGAATTGGAAAGGTAATCGAATTATGAA GTGGAGGCGTTCAAAGCTGAGTATGCTAACGACATAAAGAAATTACTATG TAAAACTGACAATAAAATCCATGCAGTTGGAAAGATAACATGAAAACACT AACATTCATAACACTTTAATATGGATAACATTATTTAGCTGGATTAGTAA AGAAGTATACTTTAAATGACATCCcgcccttctcacagacccagtgagAT TTTTTCACCCAACGGGGGTAAAAATagcggaccaaaactcgatgggggtt AATATTCCCATTTTGCTCatgactggggatttgaattccattgttttcta ccaagaaaattcagtagggatggaaaaaatggcaCAAAAACTTGCAGTGA GGACAAGAATGagagtaaaattttccacctGGGACAATGTTTTGACAAAT TGTTTTAAATGACATCCCAATTTTGCGTGTCACTGTTTGACAAGTTTACG ATCTTTGTTCAAACACAGTAATCAAATATTGTTGTAAGACTGTAACACAA GTTCAAGTTTAAGCGTGAAGGgaacaatccgtgccataatatatttgcac ttttggctaattaaccatttttcgaaaattgaagttcgagcgagaatgtc aatttttggcCCTcgacttgatttcatcgattattacgATCTAgcaggga tttattggtttctaggctatatttcaagcgctactggaccatttttgaac ttttggatcctcagatcctaaggtgtTAAGTCtaaagtctcatgttaaaa ctcagagttaaaactctacccttacaacctactttagagcacttacaaat cgattgtggtttcaaaacaccccggtgaatttcccttttgtgccaagtat tttgtcactgattgaaGAAAAATGTCTTTAAAGGAAAATAAAGCAACTTT TTCACAACCCAAATACGCATGACCCGTGCGGTTTTCACACAAAAGTCGGA TTGGAAGTAGACTCTATCCCtggatttcaaaatattctccCCTCTAAAAT ATAGAAAGCGCTAAATTCTATCCCTCGTCTCATAAAGCGGCGCAAATCTT AAGGCGTCACTTTTCCTTGATTCGGAAAATATCGAATAAGATTCAGGTCT ATccctttcgggctttaaactcaatggtcaaATATCAGAACAAAGCAATG TTACTAGACTATGCGCTATAGTCTAGGACGAATtcgaataataaaaaaat aacctCAAACACGGAAATTAGCAGTCGGgcggaaattttgtccacgcggg CGAAAATAGTTGGAGAGTCTCTATTTTCCGCCGCGCAATTTATTACGTTT TATACGCCGCGCAAtttattacgttttataatatacaactaTTTTATAtc
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00005001TCONS_00005001Clytia hemisphaericatranscript
TCONS_00005002TCONS_00005002Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00005001-proteinTCONS_00005001-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000050supercontigsc0000050:469602..477751 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.06 0.12 0.07 0.27 0.24 0.08 0.51 0.69 0.24 0.22 0.15 0.2 3.35 3.04 0.97 0.79 0.36 0.51 3.45 4.31 0.96 0.91 0.23 0.34 0.93 1.09 0.46 0.18 0.39 0.49