XLOC_001017 (gene) - C. hemisphaerica

Overview
NameXLOC_001017
Unique NameXLOC_001017
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000012:1098370..1103875-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001017 ID=XLOC_001017|Name=XLOC_001017|organism=Clytia hemisphaerica|type=gene|length=5506bp|location=Sequence derived from alignment at sc0000012:1098370..1103875- (Clytia hemisphaerica)
GAAAAGAAAATGATTTTTGATTGTTTTTATTAACTTCATTTTAAGCTTTT TGGCGTAATCTACCAAAACTGTTGTCATGCGTTTCCCCTCCCCAATCAAA AAAAATTCCTATATAAAATTGGTAGAACTTGTATGAACAATCCACTGGGT CGACAAGTTTCTCTTAGCGAATCACCTGTCGGCTTTTTTACCTTTGCGCA TGCTCAATACAAAGACGGGGCAATGCTGAGATTTTTAAGCTTTCATAGAG AAAGTGAATTTGTGTGGTCAGGCTATACAGGACAGGTGCTACATACACTT TGATTATATGTATATAGTAATTTGTTGAGAAGAAGAACTGTCCATTTTAT TATCCAACATTAAAAAGAGAAGAAAACAGCATACACACATAATAAAAGCA AACAGACCAACATAAATGTCATTTGTTTATACATTGATCAGAATCCTGGT TGTTGGTGCAAATAAGTATACACAACTGTTTGCTTAACATTAAACAGAAA GAGAGTACTACTGGATAAAAGTATTTTTAAAAAACATAAATCTGTATTAA AGAAAGTGTGTAGTGTATGTGTAGCACATGCTTTTTTGTGGATCGAGAAA CAAATTGTGTGTTTTTTATTTAATTGGAAGCATTCATTCGTCTTGGTTGA GCTGTTCCAATTGACACTACTGTAGTGAGAAGTTAGAAGATAAGAAAACT GGCAATGTCGCACCTATTCACTGCTGACTCGCTTGGTCGAGATTTTTTAT CCAAGAGCCTTGGTGGAATACCTTCATCCAGGATGCCGCCTTCTTTACTC CACAACGGACCGACTCATGGCAATATTGGATCACAGGTATTCTTTCTTTG GTTCTTGAAAATTTTCATTGAAAAATAATTTTAAAAATCGGTTATATGAA GATTTATTTGACTTTTCTTGATTTTCCTTCAAAAATACACATCTTTTGTC CTCTTCTAGTTTCTTATGTGCCTCTAACTAATTTTTTTTGCATTTAATTC AGTCGAACTTTCTCAAATAGAGCTACTTTTCAGCCTCTAGAGAACAATGC ACTATTCTTCTTTCACAATTTCTTACTGGGGACAACTTTGGGTATTCTGA ACGACTGAGCGAAAACAAAAAAATGTGCAAAACACGGCAAAACACGATCA TCTCTAAAGGCAGAATTCTAATATCAGCAGAGAGGATATATCTTTTTCTT TCCATTTCTTCATTTTTTTGTAATTCCCTTTTCTTTCTTTTTTTGAAGAT TACTATCACGTTGCGAAACCCTTGTTCACTAAGGCTACCCTTTTTTATAT TTTCCTTATTCATCTCTAGTATGGTAAGAGTTGACCTAACATAACATGAT AAAATGAAAATATCAATTTTTAATAGCCAAAACTTAGGTACATGTTTTTA AAACGTGTGTTACAGACTTACAGATATAATACCGCCTACCACTACAGTAT GAAGTACAACCATTGGTATGTAAAATATATGTACGTCAAGTCTATCTCGA TGGCTCTTCTTTAACAATTTATCATTTTAATTGTTGACTTTAGTTATTAA CAAGTTCTGGGGATAAACTTAAACCTATTTGTTTTATAACGTATACATAA TGAATAAATTTAAAGGGACATTTTTTTCTCACGTTTCTATTTGTCTTTTA AAAATAGGTGAGCTAATTAATTAAAAACTGAAACAAAACCAATAATTTTT TTATCGCGTTTTCTTGACAAAATTTTATGTTTGTCATATCGATTTGGTGC TGGTCTCGAGTTATTTCAAACTTTTAGTTATTTTTAATAGCCTCTCTTTC ACACTTTGTTCTCGTAATTTTTTTAGGGAAAGAGAGCTTTTCACTTGCAT ATGGCATAAGATTTTTTTCGTTTTGTTTTTGTCCGCATAATTGAGAAAAC AATGGAGCTATAAGGGATGTAGAATGGAAAATTACAATGCAAATTTTCAC AAAAAACACGTTGTTATAATAATTTTCTTGTCGAGGTTTAAAATTAAAGA GAGTGAGAGAGGAGAAGAAGAAGAAGGCTCACTCACACAACATAAAAAAA AGAGAGAAAAAATAAATAAAGAAAGAAAGAGGGGGAGAAAAAAAAGTGAA GATAAAAGAAAAATTTGATCGCCTGGATCAGTTGAAAATAGTCAGGGAAG AGTTCAGAAGGCTTCCATTTTTGGTTCCTTCGTTCTTATATCAAAAAAAG AAGGAAATCTTTTATCGGGCGAATTTTTTCTTCTCAATTTTGCCCTTCTT CGTTTTTTCGTACAATTTTGAAGATATTTTAATTTTCGTTTGGTATATGA AGGAATTTTTTGCTCAAAACAAAAATGGATAAAATTGACAGCAAACAATT CGTCAATAAACTTGTAAGTCCCTTTTTAGGACCTTTTTTTTGTGGTAGTA TTTCATGGCTATACTTAAAAAAAAAATCAGAATTGGAGAGTTTAAAAAAA ATGTTTTATAGTTTTGAAGAACGCTATGATAGATGCATTCAAATCATTCA ATAAAATATGGTCACAAAACTCTTCCTTCATCAATTATTGATCCACTTCA ATTGATTTGTTATGGACGCGAAAATGCCTGCTTTCAAATGGAAAAAAAAA TCAATGATTCAATTTTGAATTGAAATTTTTTATAAAATATTCGTTATTCA TCTGTTTTTATGCGAAATATATAGCGGCGATAGAAAAGTGATAATTTATG TTAATTGCGTGTAATTAATTCTATTTCACGGCTTTATTCAGAAGAAGTGC TGTTTTCAAATTTCAAGTGTTTGTTATGTTTGGGTGTGTAGAAAACGCCT ACTTTTAATTNCGTTGTTATAATAATTTTCTTGTCGAGGTTTAAAATTAA AGAGAGTGAGAGAGGAGAAGAAGAAGAAGGCTCACTCACACAACATAAAA AAAAGAGAGAAAAAATAAATAAAGAAAGAAAGAGGGGGAGAAAAAAAAGT GAAGATAAAAGAAAAATTTGATCGCCTGGATCAGTTGAAAATAGTCAGGG AAGAGTTCAGAAGGCTTCCATTTTTGGTTCCTTCGTTCTTATATCAAAAA AAGAAGGAAATCTTTTATCGGGCGAATTTTTTCTTCTCAATTTTGCCCTT CTTCGTTTTTTCGTACAATTTTGAAGATATTTTAATTTTCGTTTGGTATA TGAAGGAATTTTTTGCTCAAAACAAAAATGGATAAAATTGACAGCAAACA ATTCGTCAATAAACTTGTAAGTCCCTTTTTAGGACCTTTTTTTTGTGGTA GTATTTCATGGCTATACTTAAAAAAAAAATCAGAATTGGAGAGTTTAAAA AAAATGTTTTATAGTTTTGAAGAACGCTATGATAGATGCATTCAAATCAT TCAATAAAATATGGTCACAAAACTCTTCCTTCATCAATTATTGATCCACT TCAATTGATTTGTTATGGACGCGAAAATGCCTGCTTTCAAATGGAAAAAA AAATCAATGATTCAATTTTGAATTGACATTTTTTATAAAATATTCGTTAT TCATCTGTTTTTATGCGAGATATATAGCGGCGATAGAAAAGTGATAATTT ATGTTAATTGCGTGTAATTAATTCTATTTCACGGCTTTATTCAGAATAAG TGCTGTTTTCAAATTTCAAGTGTTTGTTATGTTTGGGTGTGTAGAAAACG CCTACTTTTAATTATTATCATGCAGAATTATAGCGGCTCTTAAAATGGCC TTTGGCATATAGCTGTATATGAAAAATTTGAAGGGGTTGAAGGGACCAGC TCTTATTGAAGCTAGTTTACATAAACATCGGAAAGATTCTTTTTTAAAGT TAGTGTTTTGTGCTATTGTTTTCCGGGTATTATGATGTTTGGTCGTCTTC CGATCGTGTAAATCGATGAATGAATCGATAATTTCAAAGGAGAACCGAAG AGTCATTCCCTGGCCACTTTGACATCGACATTATGTAAATATCTTTTAAT TTCTATTTTTCAGGTATCAGGCATGTTTGAAACAAATTTAGACGAATCAC ACCTCCTGGGTTCGCATTTAGACCCGATGAGTAAATATCTACCCAAACCA ACTGGAGGTGTTAAAATGCCGACCGCGTTTTTAAACAGTTTACACGCAGC CAATCCTGATCCCACACAATACGATCCTCATGATATCCTCGATCAAATTT CGGCTTCTTTACAACCGAATGGCGCTTCTGAAAATTCTTACGACCATGGT CCAACTTCAACAAACGCTACAAATTATTCAACATCACATTTGTTGTCACC TTCCTCGACCTCATTTTCGTCATCAACTTTCAGTAATGGTAATTTCTCTA CCTTCAATAATACCTTTGCTGCAGCTGCAGCCGCTGCGGCCGCAGCAGCC GCCCAAGTCGGTCAAGAGAGCGAATGTACGCCGCGTGAACTGGAATGGTT CGCCGAACGCTTCAAACAACGTCGTATCAAATTAGGCGTCACACAGGCGG ATGTCGGTGGTGCACTGGCACATTTAAAGTTACCAGGAGTTGGTAGTTTG AGTCAATCTACGATTTGTCGTTTCGAATCACTAACACTTAGCCATAATAA CATGATGGCTTTAAAACCTGTTCTCTCTGCCTGGTTAGATGAAGCAGAAC GAGCAAACCGTATGAAAGCTAAAGACAGTGCCTTTTTACCAAATGCTGAT AAAAAACGCAAGCGTACGTCCATAGGGGCTGCTGAAAAACGCTCTTTAGA GGCTTATTTTGCAATGCAGCCAAGACCATCAAGTGATAAGATTGCAGCCA TTGCAGAGAAATTAGACTTGTCCAAAAATGTTGTACGTGTATGGTTTTGT AATCAACGACAAAAGAAGAAAAGAATGAAGTTTTCAGTTCATTAAAATTT TGTTTGGTCGTGATGAAAAATAAAAACACTGACGACATCTTTTTTGTAGA TATATTTATGATCATCAACACACCTCGTCCCATCTAAAATTAAAAGGGCT TGGGAGAAATAAGTAAATATGTTTGATTTGCCTCAAGAGTAAAAAAAAGA AAATTTGACTAGGTTAGATATCATTTTTACAGGGAGTTTTGTGTTCCTAT CTTCTGACAGGTTTTTGCCCATTTTGAAACCATATTTTGTGTGTGCATGT TTTTATAAATCTTCATCAAGTTCTACAGTAACTTCTGGAGTCATAGTTCT TTTTCAAATTTTACTACTTCTGTTTATTTTATTTTATTGTATTTGTATTT TTATTTTGTCCTTGTATATTTTGGCTTTTTTATGCCATTTTTTGTTTTCT TTCCTTTTTTATTTTTCCTTTTTTTTATCATTTCTTCTTAAATTAATGTA TATAGTTTATAAATATTATAAAATAAAATGCCTTTTGTATTATTTTGCAC ATTTTCGAGGTTCCTAAATGACCTCCTAAGTGACCTATGTATTATTATTA TTGTTTATTCGAATTTTGCGACAAAGAAAATTTCTTTTTTTATTTATGAT GTTTTGTCAAAGAAATCGTACTTTTTGATGACAAAAAGAAATTACAAAAG AAAAAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00001976TCONS_00001976Clytia hemisphaericatranscript
TCONS_00001975TCONS_00001975Clytia hemisphaericatranscript
TCONS_00001974TCONS_00001974Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00001976-proteinTCONS_00001976-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000012supercontigsc0000012:1098370..1103875 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.38 0.36 0.16 0.15 48.43 41.45 39 43.33 19.16 18.17 14.95 13.02 39.63 33.26 21.29 28.94 28.63 30.15 17.28 17.23 34.75 35.12 11.6 16.31 14.84 21.16 10.05 6.11 0.2 0.22