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XLOC_000736 (gene) - C. hemisphaerica

Overview
NameXLOC_000736
Unique NameXLOC_000736
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000010:792451..799122+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000736 ID=XLOC_000736|Name=XLOC_000736|organism=Clytia hemisphaerica|type=gene|length=6672bp|location=Sequence derived from alignment at sc0000010:792451..799122+ (Clytia hemisphaerica)
CTCCATCAATCAGCATTCATCTTGTTTATCAATGATTGTTTCTAATCTGT TCTAATCcaggtaaaaaaaaataaataaaaaaattgaaaacatgtCTGAT TACAGCAGTTTCGGTTCATCCTCATTGGATTCGCTTTCTTCTTCATCGGG TTTTGAATCATCACCAAGGTATGGATCAAGTGGTGGTCAACCCTCTTCCT CACAAATGATGGAAGCAGTCAAACAACAAATAGCTGTTGCTAATGCTCAA GAACTTCTATCTGTAAGTATTGCACCCAgttaaatgttttattttcaaaa agagttGAGATATGATTTGGATATATGTTACTTTGCTCTTACGGATATTC TCTTGGCTTGAATCCAGGGGAGTCATTCCTAGAATTACCTCCCTTCTgtc ctcttttttctttcatttttgcaACTCTTTTCAGTGTGGTATTTATTACG AGTCTCCTCAAAAGCTGACCAGGTCACTAAGGCTTGATAGGTGTATTTTT TTACACGCTTTTTAATAAGAatgattttataagaacacgaggctgaaaat tgactaaacctaagaacaaataaAGAACAATCTGAgactcagatttcaga aattactaaaaCAGTACTGAACTTAACAGATTTCAAACctattttaagtt tttaggTAAAGAAGCTGAGCGTATTAAAAACATTaggagaacatttttaa gccaaaaaaattaaaaacagccCAGTCTGATTAAAAATTAGCTGGTTCGT TTCACAATGatcaaaattttctcacaatgttttcattttacaaactatct tcttattatttattgttatcattttatttttagaaaatgtctGACAAGTG TTTCAAAAAGTGCATCACAAAACCTGGAGCCAACTTGGATAATTCAGAAC AGGTAAAGTGAATTTAACATCATTTTCATTGATCACTGTAACgtgcactg ggctcaacttcagtatagGTGTGAAAGtggaaggcccaattgtaaacact tttttataaacAGGGACACTTGAGAATAGAGAAGGCTCAATTGTTAATCC AGGATGATGGGTACTCAGAATAAAGAGAGGGCCTTTGATTGTAAAGTTAG AATTATGAGTCATAGGGTACTCCGGATTAAGGAAAGCTCAATTATAAAGC CCACGTGATAGGAGCTTGGGATAAAGGAAGGCTCGGTTGTGAATAAGCAt acaatgttcttagtcaaattactcaatttttttaagagatagatgtttgt tttgctcatgagggcttacttttgaagaatatgtatgcttagacatgaaa ttttggttgcttggcgtgtttttatagaaaaactagccaaatttgatatt tttttataagcacattatcaattacttaggtattagcttttctcgagatt ggctctttcattctttatgactttttttttgcacaaagatgcataactat aaaccctcgaatgtgacggagctcgatttttggagaaaacaaaattttgg gtaaattttagctaaaaaacggctaagaaaagggttttttggacttcgtt aaatattggatcgttgtttttttcatgaaagtaggtaaaagatggctcaa gcagattgttgtaaaaaaaggattttcagctcaaaaaacgcatgtttatc tataagaatcactattaataagcatacatcaatgttcttagcgccaaatt tctcaattttttgatgagatagatgtttattttgctcaggaagtcttgaa tatgaaagaatatttcaagagcatgaaattttggtttctaaacgtttttt tagaagaaacaaacgactaattttaatacatcgtcactatttgtcttctg aatgattgttctaacggtcatgctcacgtagatatcaattatatatgtgt taaatgcataaccagctAGGTCCATAAAAGTTTCACTTGTTTAGTAAATT Tcggcaaaatctttgaaaaaacgagtccctagggtccatttttcgaacct cagtggAGCACCCCGTCGGtaggcaagggtagtacccccccccccggagt tACTCTAATTGCTTCACTTTGCGATCAGTACTGTTTGCGATTGTTCTTTA AAGAAATCTAATATCTAACCTAGTAACATATTCTTTGAACAAATAAGCAA TATTTACTTTGCTGGACGGGTAACGTCATGCTTTCCATCTTGTGACTGCA AATTTATTCATCGTTTTAAatactttgatttttttcctttgTTGAAACTT TGTTgtaacaaaataacaaatttcACTTTCAGTGTGTTTTGATAGATATT TATgacaacaaatatttttatagaaaatatatataaatcataaatcattt TTATAGAAATGTCTTGCGATGTGTATGGACCGCTACATGGAAGCATGGAA CCTGGTATCACAGACATACACCAATAGACTGAATAAAGAACACAGCATGC AAGGTGGTAGTGGTAGTGGTGTACCTAGTGCCCtcatgtaaacaaaaaaa attactgaACTCTTAAATAAAGACTGGAATAGCAGACATCTCATATGctg ttaaaaatgaaagttaatcTTTGTCTCAAGTAGTAGCCAAATACATGGCA CAGAATGTACCTTGTCTCAGAATAATAGCCAAGAACTATTAAAATGCATT CTTTGCACAAAACTATGAAGATAGATATTAATAATACATCCATTCTAATT CTAGTCCTTCTTTTCGAGCTAGGTAGCAATATGACTTTTTTTAGAAATAG AGATTAGAAtttattttcctatttttgaGCAATAACATGACTTGAAAATA AAGACCTAAACTAGACTACGGTTTGCTGAGATAAACtagacttttctttt ttgtacaTTCCTTATATGAAAACTTGATTTTTAAGTACGCATCCCTTTTT GGATTATGTTTGCCTTACCAAGAAATAATTACGTTTCcaaaaaaattcca attttcattttctatagtTTGTTTGTATAATCTCCTAAGTCTTATAAGAT TTCTTTATCTTATCATAAGAAGGCTTTGTAAATTTTAGTAGttaaacttt cataaaaaatactatataatttttgctaaaattaaGCCGCCAccagtttt cttttttcattagGAATTATAAAATTAAGCGAATACCATATAGAATGATT CTTTTGTTGCTTTTTACACCTGATCTAAGATCGGAGGTCTCTACAATTGG TGGGGAAGTTtagaaaccacaatcgatttgtaagtgctctaaagtaggtt tgaagggtagagttttaacgctagacttaagactatctgaggatccaaaa gttaaaaaatggtccagtagggcttgaaatatagcctagaaaccaataaa tccctcccagatcgaaataatcgatgaaatcaagttgaaggcccgaaatt gagattctcgctcgaacttcaattttcgaaaaatggtaaattagccaaaa gtgccaatatgttatggcactggtTGTAGTTACACTGGTagaattttaat tcaaattaattatttttaaactcTCACGCTCCGTGATTACAGTATCTTCA CACGTCAATCTTTAGTTTATTCATTTGAAATCTTCCCGAGGTTGCGAGAG TTTAGTTACTTTGGAGTAAGCGTCTTGAAACCGAGAGTGTTAAGAAACTA AGAAGCTAGTTTTCAAGACTATATTTTCCAATTATAATATGCGACCaaat tttttctctgttttCAGTGTAAGAGAAGTAAAATGGCTAATAAAAGAAAA CAGAAGACATCAGCTGAGATGAAATCTATTGCAAGCAAAATTATTAAAAT CGAcgagagaaaagaaaaattagtgCCATTTGATTTTGATGACAATGATT ACGATGTGATAATTATAACAAGGGAAAATGAGGTTTATCTGCCATCTGGT TTTGTTAAGATGTTATCTAATGGTAAAGATATCCAATTAAGGGATGGTAG AATGAATATTGACGCTTCTACTGAATGTTTGGTTCGTTGCTTATCGTTTT ATGACTTGCGATTTTGGGATGAGACGCAAGTATGTAAGTCTTACATTTTT CGAATATGTTTGCAACATTTTTATGAATCGAATGTGTGCAGTCACACTCT GTCTGGATGATGGATTAGCGCATCAAGTAGTCTTGATTTCCCAGATAATA TAAAATGTTAATATTCATGAGAATGTACATTGAAGAGGAGGCTGAGCTCT TGCAACCCCCGGTACCCATCATTCCACCACTGCGCTCTCGTACGatcatg gaaattgcaaaaatttatttatcacGTTGAAATAGCCGAAAATATCCCAA ATCAAGCATCACGCCAAATAACACAAGAATGTCAATATGAACAATTATCA ATGTCTTCAATAATTGATCCAATATCATTTACTCGATACATTTGAAACCC CACTGGCTATGACGTAATAGACGATATCAGAtaaacgtgaaaactcagat ttgacctccgagaattccccacaatgctttgtgcggaaaaatttcacctt gaacttttttccgcgcaaagcattgtggacaattctcggaggtcaaatct gagNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ttatttggcacctaagagtaagccgatatcgtctattgtttatcattttg ttttattcttACAGTTACAGTTCTATTATACTTTCTTTTTTAGTTGAAAA CCTGAGAGATGTTCTATCGGTcactaaaatgttaaaaatgaaGGGCCTGC GTGATCATATTGAAAATGAAGAGTTTCTGCCACTCATCCGTGCACCATCG GTCTCAATACATCTTACTGACTCTTTGCTTGCACATTTGGGAATCGCTCA TGAATTTGGATTGCATtgttttgtccaaaaaattatGGTCCGAAATGTAC CCCTTCGCAATTTCAATCTTATCAAGTCACCCAGCTTTAACAGATTGCAT CGAGATTTGAGATTCgagattttgaaaaacactaTAAATGATCAATTCTC CGATTCTTCTCATTTCAACCATGAACTGTTGGAAATACAAATCatcttta acttttttgattttatagttTTTGAGAATCGATCTTTGAATGTAGCACCC CAGAAAAGTTACGTTGTCTCTCCAGCTATAAACACATCGTGGAATTCTTT TGAAGAGACTGTTGCGAGAAGATTTATCCCTTATGACAAGGACTTGACAG ATTCCGTCACTTTGATCGTGGAGAACAAAGAAATCTACGTCAATTCGTAC CTCTTAACAACAAATTCGCCCGTTTTTAAAGCAATGTTGAACTCTGTGTC TTTCAAAGAGGGCCAAAGTAAAAGAGTTGAGCTTCCTGGAAAGAAACATT CTGAAATCTTATTCTTCCTGCATCATTTACAGACACCTCAAGATATTGGA AATATTATAGGTAAGAATATGCTATTACCTTCAgaatgactttttttaaa tagcaCCTTGCTTTTTCATAGTATAAACCTTTATCCTGCCTATCTCTATA GTCCTTTGGTGCTAGAAACCTCATTTTGGGATAATATTGTGATTGGNACC TATCTCTATAGCCCTTTGGTGCTAGAAACCTCATTTTGGGATAATATTGT GATTGGAGATTGTTGACCATTCTTAGCCCCCAGCCCCTTGTAGCCCCCCT CTTGTAACCTAGTTTATGAAAACTGTCCCTAGACTAcctcatttttcatc tttcagaTTTTCCTGATATTACCATTCTGGCACCCTTATGTCGTGAATAC CAAGTCGATTGGCTGACCAAGAAAATCAAGGATTTTATAAGAGTCAGAGC AGCACGACTGAACAAAAAGGGAAGCAAAATTGTTGCTCTTAATTATCTTT CATTCTCTGAAGAAATAGGTTTCGATGAAAGTAATGATACGCTGTTGGTT AATTCCTTGTCTTGTGGTTTCCATAGCCTCCAAACATGCTTAGAGTTTTC AGTGTTGAGTCGCCATAAACAAGTATTGATCGCTAGAAAAAGATTATGGC TTTTATTACGACACTTTTTTGACAAGTATCGAGATCTGATCCTTAATGAA GAAGGCTTTGGATTTCTTTCGCTTTTTGAGGAACAAAcggtttttgattt tcagtacAATAAAACTGAATGTGCTTACATTAAAGAGTTTCAAGAAAAAC ATGGCAAAGgcgagtgaaatatttttcgtcCATGAAATATCAGAATTCTT CTTACAGCTTATTCACAATCCTGCAtcatatcttttcaaaattattactt ttttcaaatCGAAAAGACGAGAGAATAGTATAAACTGTACTACTAGTTGG AAAAACAAAATTGTCaggaaaatattgacactttaCAAAGCCCGTCACTC CACCTGATCTGTTATTTTTGTTACCACTGTGAAAATGTACTTTGCCTaca cgtctttttataagaacatcca
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00001383TCONS_00001383Clytia hemisphaericatranscript
TCONS_00001384TCONS_00001384Clytia hemisphaericatranscript
TCONS_00001385TCONS_00001385Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00001385-proteinTCONS_00001385-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000010supercontigsc0000010:792451..799122 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
130.33 130.5 70.68 60.45 77.51 63.01 78.23 84.48 85.8 80.81 59.73 65.64 42.6 47.38 52.07 61.72 106.4 90.43 15.12 22.01 67.77 68.04 84.79 72.84 48.81 56.38 45.57 30.35 56.83 50.74