TCONS_00001385 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00001385
Unique Name	TCONS_00001385
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2120

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at sc0000010:792508..799122+
coding sequence from alignment at sc0000010:792508..799122+

transcript sequence

>TCONS_00001385 ID=TCONS_00001385|Name=TCONS_00001385|organism=Clytia hemisphaerica|type=transcript|length=2120bp
caggtaaaaaaaaataaataaaaaaattgaaaacatgtCTGATTACAGCA
GTTTCGGTTCATCCTCATTGGATTCGCTTTCTTCTTCATCGGGTTTTGAA
TCATCACCAAGGTATGGATCAAGTGGTGGTCAACCCTCTTCCTCACAAAT
GATGGAAGCAGTCAAACAACAAATAGCTGTTGCTAATGCTCAAGAACTTC
TATCTaaaatgtctGACAAGTGTTTCAAAAAGTGCATCACAAAACCTGGA
GCCAACTTGGATAATTCAGAACAGAAATGTCTTGCGATGTGTATGGACCG
CTACATGGAAGCATGGAACCTGGTATCACAGACATACACCAATAGACTGA
ATAAAGAACACAGCATGCAAGTGTAAGAGAAGTAAAATGGCTAATAAAAG
AAAACAGAAGACATCAGCTGAGATGAAATCTATTGCAAGCAAAATTATTA
AAATCGAcgagagaaaagaaaaattagtgCCATTTGATTTTGATGACAAT
GATTACGATGTGATAATTATAACAAGGGAAAATGAGGTTTATCTGCCATC
TGGTTTTGTTAAGATGTTATCTAATGGTAAAGATATCCAATTAAGGGATG
GTAGAATGAATATTGACGCTTCTACTGAATGTTTGGTTCGTTGCTTATCG
TTTTATGACTTGCGATTTTGGGATGAGACGCAAGTATTTGAAAACCTGAG
AGATGTTCTATCGGTcactaaaatgttaaaaatgaaGGGCCTGCGTGATC
ATATTGAAAATGAAGAGTTTCTGCCACTCATCCGTGCACCATCGGTCTCA
ATACATCTTACTGACTCTTTGCTTGCACATTTGGGAATCGCTCATGAATT
TGGATTGCATtgttttgtccaaaaaattatGGTCCGAAATGTACCCCTTC
GCAATTTCAATCTTATCAAGTCACCCAGCTTTAACAGATTGCATCGAGAT
TTGAGATTCgagattttgaaaaacactaTAAATGATCAATTCTCCGATTC
TTCTCATTTCAACCATGAACTGTTGGAAATACAAATCatctttaactttt
ttgattttatagttTTTGAGAATCGATCTTTGAATGTAGCACCCCAGAAA
AGTTACGTTGTCTCTCCAGCTATAAACACATCGTGGAATTCTTTTGAAGA
GACTGTTGCGAGAAGATTTATCCCTTATGACAAGGACTTGACAGATTCCG
TCACTTTGATCGTGGAGAACAAAGAAATCTACGTCAATTCGTACCTCTTA
ACAACAAATTCGCCCGTTTTTAAAGCAATGTTGAACTCTGTGTCTTTCAA
AGAGGGCCAAAGTAAAAGAGTTGAGCTTCCTGGAAAGAAACATTCTGAAA
TCTTATTCTTCCTGCATCATTTACAGACACCTCAAGATATTGGAAATATT
ATAGaTTTTCCTGATATTACCATTCTGGCACCCTTATGTCGTGAATACCA
AGTCGATTGGCTGACCAAGAAAATCAAGGATTTTATAAGAGTCAGAGCAG
CACGACTGAACAAAAAGGGAAGCAAAATTGTTGCTCTTAATTATCTTTCA
TTCTCTGAAGAAATAGGTTTCGATGAAAGTAATGATACGCTGTTGGTTAA
TTCCTTGTCTTGTGGTTTCCATAGCCTCCAAACATGCTTAGAGTTTTCAG
TGTTGAGTCGCCATAAACAAGTATTGATCGCTAGAAAAAGATTATGGCTT
TTATTACGACACTTTTTTGACAAGTATCGAGATCTGATCCTTAATGAAGA
AGGCTTTGGATTTCTTTCGCTTTTTGAGGAACAAAcggtttttgattttc
agtacAATAAAACTGAATGTGCTTACATTAAAGAGTTTCAAGAAAAACAT
GGCAAAGgcgagtgaaatatttttcgtcCATGAAATATCAGAATTCTTCT
TACAGCTTATTCACAATCCTGCAtcatatcttttcaaaattattactttt
ttcaaatCGAAAAGACGAGAGAATAGTATAAACTGTACTACTAGTTGGAA
AAACAAAATTGTCaggaaaatattgacactttaCAAAGCCCGTCACTCCA
CCTGATCTGTTATTTTTGTTACCACTGTGAAAATGTACTTTGCCTacacg
tctttttataagaacatcca

Run BLAST on NCBI

protein sequence of TCONS_00001385-protein

>TCONS_00001385-protein ID=TCONS_00001385-protein|Name=TCONS_00001385-protein|organism=Clytia hemisphaerica|type=polypeptide|length=492bp
MANKRKQKTSAEMKSIASKIIKIDERKEKLVPFDFDDNDYDVIIITRENE
VYLPSGFVKMLSNGKDIQLRDGRMNIDASTECLVRCLSFYDLRFWDETQV
FENLRDVLSVTKMLKMKGLRDHIENEEFLPLIRAPSVSIHLTDSLLAHLG
IAHEFGLHCFVQKIMVRNVPLRNFNLIKSPSFNRLHRDLRFEILKNTIND
QFSDSSHFNHELLEIQIIFNFFDFIVFENRSLNVAPQKSYVVSPAINTSW
NSFEETVARRFIPYDKDLTDSVTLIVENKEIYVNSYLLTTNSPVFKAMLN
SVSFKEGQSKRVELPGKKHSEILFFLHHLQTPQDIGNIIDFPDITILAPL
CREYQVDWLTKKIKDFIRVRAARLNKKGSKIVALNYLSFSEEIGFDESND
TLLVNSLSCGFHSLQTCLEFSVLSRHKQVLIARKRLWLLLRHFFDKYRDL
ILNEEGFGFLSLFEEQTVFDFQYNKTECAYIKEFQEKHGKGE

Run BLAST on NCBI

transcript from alignment at sc0000010:792508..799122+

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00001385 ID=TCONS_00001385|Name=TCONS_00001385|organism=Clytia hemisphaerica|type=transcript|length=6615bp|location=Sequence derived from alignment at sc0000010:792508..799122+ (Clytia hemisphaerica)
caggtaaaaaaaaataaataaaaaaattgaaaacatgtCTGATTACAGCA
GTTTCGGTTCATCCTCATTGGATTCGCTTTCTTCTTCATCGGGTTTTGAA
TCATCACCAAGGTATGGATCAAGTGGTGGTCAACCCTCTTCCTCACAAAT
GATGGAAGCAGTCAAACAACAAATAGCTGTTGCTAATGCTCAAGAACTTC
TATCTGTAAGTATTGCACCCAgttaaatgttttattttcaaaaagagttG
AGATATGATTTGGATATATGTTACTTTGCTCTTACGGATATTCTCTTGGC
TTGAATCCAGGGGAGTCATTCCTAGAATTACCTCCCTTCTgtcctctttt
ttctttcatttttgcaACTCTTTTCAGTGTGGTATTTATTACGAGTCTCC
TCAAAAGCTGACCAGGTCACTAAGGCTTGATAGGTGTATTTTTTTACACG
CTTTTTAATAAGAatgattttataagaacacgaggctgaaaattgactaa
acctaagaacaaataaAGAACAATCTGAgactcagatttcagaaattact
aaaaCAGTACTGAACTTAACAGATTTCAAACctattttaagtttttaggT
AAAGAAGCTGAGCGTATTAAAAACATTaggagaacatttttaagccaaaa
aaattaaaaacagccCAGTCTGATTAAAAATTAGCTGGTTCGTTTCACAA
TGatcaaaattttctcacaatgttttcattttacaaactatcttcttatt
atttattgttatcattttatttttagaaaatgtctGACAAGTGTTTCAAA
AAGTGCATCACAAAACCTGGAGCCAACTTGGATAATTCAGAACAGGTAAA
GTGAATTTAACATCATTTTCATTGATCACTGTAACgtgcactgggctcaa
cttcagtatagGTGTGAAAGtggaaggcccaattgtaaacacttttttat
aaacAGGGACACTTGAGAATAGAGAAGGCTCAATTGTTAATCCAGGATGA
TGGGTACTCAGAATAAAGAGAGGGCCTTTGATTGTAAAGTTAGAATTATG
AGTCATAGGGTACTCCGGATTAAGGAAAGCTCAATTATAAAGCCCACGTG
ATAGGAGCTTGGGATAAAGGAAGGCTCGGTTGTGAATAAGCAtacaatgt
tcttagtcaaattactcaatttttttaagagatagatgtttgttttgctc
atgagggcttacttttgaagaatatgtatgcttagacatgaaattttggt
tgcttggcgtgtttttatagaaaaactagccaaatttgatatttttttat
aagcacattatcaattacttaggtattagcttttctcgagattggctctt
tcattctttatgactttttttttgcacaaagatgcataactataaaccct
cgaatgtgacggagctcgatttttggagaaaacaaaattttgggtaaatt
ttagctaaaaaacggctaagaaaagggttttttggacttcgttaaatatt
ggatcgttgtttttttcatgaaagtaggtaaaagatggctcaagcagatt
gttgtaaaaaaaggattttcagctcaaaaaacgcatgtttatctataaga
atcactattaataagcatacatcaatgttcttagcgccaaatttctcaat
tttttgatgagatagatgtttattttgctcaggaagtcttgaatatgaaa
gaatatttcaagagcatgaaattttggtttctaaacgtttttttagaaga
aacaaacgactaattttaatacatcgtcactatttgtcttctgaatgatt
gttctaacggtcatgctcacgtagatatcaattatatatgtgttaaatgc
ataaccagctAGGTCCATAAAAGTTTCACTTGTTTAGTAAATTTcggcaa
aatctttgaaaaaacgagtccctagggtccatttttcgaacctcagtggA
GCACCCCGTCGGtaggcaagggtagtacccccccccccggagttACTCTA
ATTGCTTCACTTTGCGATCAGTACTGTTTGCGATTGTTCTTTAAAGAAAT
CTAATATCTAACCTAGTAACATATTCTTTGAACAAATAAGCAATATTTAC
TTTGCTGGACGGGTAACGTCATGCTTTCCATCTTGTGACTGCAAATTTAT
TCATCGTTTTAAatactttgatttttttcctttgTTGAAACTTTGTTgta
acaaaataacaaatttcACTTTCAGTGTGTTTTGATAGATATTTATgaca
acaaatatttttatagaaaatatatataaatcataaatcatttTTATAGA
AATGTCTTGCGATGTGTATGGACCGCTACATGGAAGCATGGAACCTGGTA
TCACAGACATACACCAATAGACTGAATAAAGAACACAGCATGCAAGGTGG
TAGTGGTAGTGGTGTACCTAGTGCCCtcatgtaaacaaaaaaaattactg
aACTCTTAAATAAAGACTGGAATAGCAGACATCTCATATGctgttaaaaa
tgaaagttaatcTTTGTCTCAAGTAGTAGCCAAATACATGGCACAGAATG
TACCTTGTCTCAGAATAATAGCCAAGAACTATTAAAATGCATTCTTTGCA
CAAAACTATGAAGATAGATATTAATAATACATCCATTCTAATTCTAGTCC
TTCTTTTCGAGCTAGGTAGCAATATGACTTTTTTTAGAAATAGAGATTAG
AAtttattttcctatttttgaGCAATAACATGACTTGAAAATAAAGACCT
AAACTAGACTACGGTTTGCTGAGATAAACtagacttttcttttttgtaca
TTCCTTATATGAAAACTTGATTTTTAAGTACGCATCCCTTTTTGGATTAT
GTTTGCCTTACCAAGAAATAATTACGTTTCcaaaaaaattccaattttca
ttttctatagtTTGTTTGTATAATCTCCTAAGTCTTATAAGATTTCTTTA
TCTTATCATAAGAAGGCTTTGTAAATTTTAGTAGttaaactttcataaaa
aatactatataatttttgctaaaattaaGCCGCCAccagttttctttttt
cattagGAATTATAAAATTAAGCGAATACCATATAGAATGATTCTTTTGT
TGCTTTTTACACCTGATCTAAGATCGGAGGTCTCTACAATTGGTGGGGAA
GTTtagaaaccacaatcgatttgtaagtgctctaaagtaggtttgaaggg
tagagttttaacgctagacttaagactatctgaggatccaaaagttaaaa
aatggtccagtagggcttgaaatatagcctagaaaccaataaatccctcc
cagatcgaaataatcgatgaaatcaagttgaaggcccgaaattgagattc
tcgctcgaacttcaattttcgaaaaatggtaaattagccaaaagtgccaa
tatgttatggcactggtTGTAGTTACACTGGTagaattttaattcaaatt
aattatttttaaactcTCACGCTCCGTGATTACAGTATCTTCACACGTCA
ATCTTTAGTTTATTCATTTGAAATCTTCCCGAGGTTGCGAGAGTTTAGTT
ACTTTGGAGTAAGCGTCTTGAAACCGAGAGTGTTAAGAAACTAAGAAGCT
AGTTTTCAAGACTATATTTTCCAATTATAATATGCGACCaaattttttct
ctgttttCAGTGTAAGAGAAGTAAAATGGCTAATAAAAGAAAACAGAAGA
CATCAGCTGAGATGAAATCTATTGCAAGCAAAATTATTAAAATCGAcgag
agaaaagaaaaattagtgCCATTTGATTTTGATGACAATGATTACGATGT
GATAATTATAACAAGGGAAAATGAGGTTTATCTGCCATCTGGTTTTGTTA
AGATGTTATCTAATGGTAAAGATATCCAATTAAGGGATGGTAGAATGAAT
ATTGACGCTTCTACTGAATGTTTGGTTCGTTGCTTATCGTTTTATGACTT
GCGATTTTGGGATGAGACGCAAGTATGTAAGTCTTACATTTTTCGAATAT
GTTTGCAACATTTTTATGAATCGAATGTGTGCAGTCACACTCTGTCTGGA
TGATGGATTAGCGCATCAAGTAGTCTTGATTTCCCAGATAATATAAAATG
TTAATATTCATGAGAATGTACATTGAAGAGGAGGCTGAGCTCTTGCAACC
CCCGGTACCCATCATTCCACCACTGCGCTCTCGTACGatcatggaaattg
caaaaatttatttatcacGTTGAAATAGCCGAAAATATCCCAAATCAAGC
ATCACGCCAAATAACACAAGAATGTCAATATGAACAATTATCAATGTCTT
CAATAATTGATCCAATATCATTTACTCGATACATTTGAAACCCCACTGGC
TATGACGTAATAGACGATATCAGAtaaacgtgaaaactcagatttgacct
ccgagaattccccacaatgctttgtgcggaaaaatttcaccttgaacttt
tttccgcgcaaagcattgtggacaattctcggaggtcaaatctgagNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNttatttg
gcacctaagagtaagccgatatcgtctattgtttatcattttgttttatt
cttACAGTTACAGTTCTATTATACTTTCTTTTTTAGTTGAAAACCTGAGA
GATGTTCTATCGGTcactaaaatgttaaaaatgaaGGGCCTGCGTGATCA
TATTGAAAATGAAGAGTTTCTGCCACTCATCCGTGCACCATCGGTCTCAA
TACATCTTACTGACTCTTTGCTTGCACATTTGGGAATCGCTCATGAATTT
GGATTGCATtgttttgtccaaaaaattatGGTCCGAAATGTACCCCTTCG
CAATTTCAATCTTATCAAGTCACCCAGCTTTAACAGATTGCATCGAGATT
TGAGATTCgagattttgaaaaacactaTAAATGATCAATTCTCCGATTCT
TCTCATTTCAACCATGAACTGTTGGAAATACAAATCatctttaacttttt
tgattttatagttTTTGAGAATCGATCTTTGAATGTAGCACCCCAGAAAA
GTTACGTTGTCTCTCCAGCTATAAACACATCGTGGAATTCTTTTGAAGAG
ACTGTTGCGAGAAGATTTATCCCTTATGACAAGGACTTGACAGATTCCGT
CACTTTGATCGTGGAGAACAAAGAAATCTACGTCAATTCGTACCTCTTAA
CAACAAATTCGCCCGTTTTTAAAGCAATGTTGAACTCTGTGTCTTTCAAA
GAGGGCCAAAGTAAAAGAGTTGAGCTTCCTGGAAAGAAACATTCTGAAAT
CTTATTCTTCCTGCATCATTTACAGACACCTCAAGATATTGGAAATATTA
TAGGTAAGAATATGCTATTACCTTCAgaatgactttttttaaatagcaCC
TTGCTTTTTCATAGTATAAACCTTTATCCTGCCTATCTCTATAGTCCTTT
GGTGCTAGAAACCTCATTTTGGGATAATATTGTGATTGGNACCTATCTCT
ATAGCCCTTTGGTGCTAGAAACCTCATTTTGGGATAATATTGTGATTGGA
GATTGTTGACCATTCTTAGCCCCCAGCCCCTTGTAGCCCCCCTCTTGTAA
CCTAGTTTATGAAAACTGTCCCTAGACTAcctcatttttcatctttcaga
TTTTCCTGATATTACCATTCTGGCACCCTTATGTCGTGAATACCAAGTCG
ATTGGCTGACCAAGAAAATCAAGGATTTTATAAGAGTCAGAGCAGCACGA
CTGAACAAAAAGGGAAGCAAAATTGTTGCTCTTAATTATCTTTCATTCTC
TGAAGAAATAGGTTTCGATGAAAGTAATGATACGCTGTTGGTTAATTCCT
TGTCTTGTGGTTTCCATAGCCTCCAAACATGCTTAGAGTTTTCAGTGTTG
AGTCGCCATAAACAAGTATTGATCGCTAGAAAAAGATTATGGCTTTTATT
ACGACACTTTTTTGACAAGTATCGAGATCTGATCCTTAATGAAGAAGGCT
TTGGATTTCTTTCGCTTTTTGAGGAACAAAcggtttttgattttcagtac
AATAAAACTGAATGTGCTTACATTAAAGAGTTTCAAGAAAAACATGGCAA
AGgcgagtgaaatatttttcgtcCATGAAATATCAGAATTCTTCTTACAG
CTTATTCACAATCCTGCAtcatatcttttcaaaattattacttttttcaa
atCGAAAAGACGAGAGAATAGTATAAACTGTACTACTAGTTGGAAAAACA
AAATTGTCaggaaaatattgacactttaCAAAGCCCGTCACTCCACCTGA
TCTGTTATTTTTGTTACCACTGTGAAAATGTACTTTGCCTacacgtcttt
ttataagaacatcca

Coding sequence (CDS) from alignment at sc0000010:792508..799122+

>TCONS_00001385 ID=TCONS_00001385|Name=TCONS_00001385|organism=Clytia hemisphaerica|type=CDS|length=4437bp|location=Sequence derived from alignment at sc0000010:792508..799122+ (Clytia hemisphaerica)
ATGGCTAATAAAAGAAAACAGAAGACATCAGCTGAGATGAAATCTATTGC
AAGCAAAATTATTAAAATCGAcgagagaaaagaaaaattagtgCCATTTG
ATTTTGATGACAATGATTACGATGTGATAATTATAACAAGGGAAAATGAG
GTTTATCTGCCATCTGGTTTTGTTAAGATGTTATCTAATGGTAAAGATAT
CCAATTAAGGGATGGTAGAATGAATATTGACGCTTCTACTGAATGTTTGG
TTCGTTGCTTATCGTTTTATGACTTGCGATTTTGGGATGAGACGCAAGTA
TTTGAAAACCTGAGAGATGTTCTATCGGTcactaaaatgttaaaaatgaa
GGGCCTGCGTGATCATATTGAAAATGAAGAGTTTCTGCCACTCATCCGTG
CACCATCGGTCTCAATACATCTTACTGACTCTTTGCTTGCACATTTGGGA
ATCGCTCATGAATTTGGATTGCATtgttttgtccaaaaaattatGGTCCG
AAATGTACCCCTTCGCAATTTCAATCTTATCAAGTCACCCAGCTTTAACA
GATTGCATCGAGATTTGAGATTCgagattttgaaaaacactaTAAATGAT
CAATTCTCCGATTCTTCTCATTTCAACCATGAACTGTTGGAAATACAAAT
CatctttaacttttttgattttatagttTTTGAGAATCGATCTTTGAATG
TAGCACCCCAGAAAAGTTACGTTGTCTCTCCAGCTATAAACACATCGTGG
AATTCTTTTGAAGAGACTGTTGCGAGAAGATTTATCCCTTATGACAAGGA
CTTGACAGATTCCGTCACTTTGATCGTGGAGAACAAAGAAATCTACGTCA
ATTCGTACCTCTTAACAACAAATTCGCCCGTTTTTAAAGCAATGTTGAAC
TCTGTGTCTTTCAAAGAGGGCCAAAGTAAAAGAGTTGAGCTTCCTGGAAA
GAAACATTCTGAAATCTTATTCTTCCTGCATCATTTACAGACACCTCAAG
ATATTGGAAATATTATAGaTTTTCCTGATATTACCATTCTGGCACCCTTA
TGTCGTGAATACCAAGTCGATTGGCTGACCAAGAAAATCAAGGATTTTAT
AAGAGTCAGAGCAGCACGACTGAACAAAAAGGGAAGCAAAATTGTTGCTC
TTAATTATCTTTCATTCTCTGAAGAAATAGGTTTCGATGAAAGTAATGAT
ACGCTGTTGGTTAATTCCTTGTCTTGTGGTTTCCATAGCCTCCAAACATG
CTTAGAGTTTTCAGTGTTGAGTCGCCATAAACAAGTATTGATCGCTAGAA
AAAGATTATGGCTTTTATTACGACACTTTTTTGACAAGTATCGAGATCTG
ATCCTTAATGAAGAAGGCTTTGGATTTCTTTCGCTTTTTGAGGAACAAAc
ggtttttgattttcagtacAATAAAACTGAATGTGCTTACATTAAAGAGT
TTCAAGAAAAACATGGCAAAGgcgagtgaATGGCTAATAAAAGAAAACAG
AAGACATCAGCTGAGATGAAATCTATTGCAAGCAAAATTATTAAAATCGA
cgagagaaaagaaaaattagtgCCATTTGATTTTGATGACAATGATTACG
ATGTGATAATTATAACAAGGGAAAATGAGGTTTATCTGCCATCTGGTTTT
GTTAAGATGTTATCTAATGGTAAAGATATCCAATTAAGGGATGGTAGAAT
GAATATTGACGCTTCTACTGAATGTTTGGTTCGTTGCTTATCGTTTTATG
ACTTGCGATTTTGGGATGAGACGCAAGTATTTGAAAACCTGAGAGATGTT
CTATCGGTcactaaaatgttaaaaatgaaGGGCCTGCGTGATCATATTGA
AAATGAAGAGTTTCTGCCACTCATCCGTGCACCATCGGTCTCAATACATC
TTACTGACTCTTTGCTTGCACATTTGGGAATCGCTCATGAATTTGGATTG
CATtgttttgtccaaaaaattatGGTCCGAAATGTACCCCTTCGCAATTT
CAATCTTATCAAGTCACCCAGCTTTAACAGATTGCATCGAGATTTGAGAT
TCgagattttgaaaaacactaTAAATGATCAATTCTCCGATTCTTCTCAT
TTCAACCATGAACTGTTGGAAATACAAATCatctttaacttttttgattt
tatagttTTTGAGAATCGATCTTTGAATGTAGCACCCCAGAAAAGTTACG
TTGTCTCTCCAGCTATAAACACATCGTGGAATTCTTTTGAAGAGACTGTT
GCGAGAAGATTTATCCCTTATGACAAGGACTTGACAGATTCCGTCACTTT
GATCGTGGAGAACAAAGAAATCTACGTCAATTCGTACCTCTTAACAACAA
ATTCGCCCGTTTTTAAAGCAATGTTGAACTCTGTGTCTTTCAAAGAGGGC
CAAAGTAAAAGAGTTGAGCTTCCTGGAAAGAAACATTCTGAAATCTTATT
CTTCCTGCATCATTTACAGACACCTCAAGATATTGGAAATATTATAGaTT
TTCCTGATATTACCATTCTGGCACCCTTATGTCGTGAATACCAAGTCGAT
TGGCTGACCAAGAAAATCAAGGATTTTATAAGAGTCAGAGCAGCACGACT
GAACAAAAAGGGAAGCAAAATTGTTGCTCTTAATTATCTTTCATTCTCTG
AAGAAATAGGTTTCGATGAAAGTAATGATACGCTGTTGGTTAATTCCTTG
TCTTGTGGTTTCCATAGCCTCCAAACATGCTTAGAGTTTTCAGTGTTGAG
TCGCCATAAACAAGTATTGATCGCTAGAAAAAGATTATGGCTTTTATTAC
GACACTTTTTTGACAAGTATCGAGATCTGATCCTTAATGAAGAAGGCTTT
GGATTTCTTTCGCTTTTTGAGGAACAAAcggtttttgattttcagtacAA
TAAAACTGAATGTGCTTACATTAAAGAGTTTCAAGAAAAACATGGCAAAG
gcgagtgaATGGCTAATAAAAGAAAACAGAAGACATCAGCTGAGATGAAA
TCTATTGCAAGCAAAATTATTAAAATCGAcgagagaaaagaaaaattagt
gCCATTTGATTTTGATGACAATGATTACGATGTGATAATTATAACAAGGG
AAAATGAGGTTTATCTGCCATCTGGTTTTGTTAAGATGTTATCTAATGGT
AAAGATATCCAATTAAGGGATGGTAGAATGAATATTGACGCTTCTACTGA
ATGTTTGGTTCGTTGCTTATCGTTTTATGACTTGCGATTTTGGGATGAGA
CGCAAGTATTTGAAAACCTGAGAGATGTTCTATCGGTcactaaaatgtta
aaaatgaaGGGCCTGCGTGATCATATTGAAAATGAAGAGTTTCTGCCACT
CATCCGTGCACCATCGGTCTCAATACATCTTACTGACTCTTTGCTTGCAC
ATTTGGGAATCGCTCATGAATTTGGATTGCATtgttttgtccaaaaaatt
atGGTCCGAAATGTACCCCTTCGCAATTTCAATCTTATCAAGTCACCCAG
CTTTAACAGATTGCATCGAGATTTGAGATTCgagattttgaaaaacacta
TAAATGATCAATTCTCCGATTCTTCTCATTTCAACCATGAACTGTTGGAA
ATACAAATCatctttaacttttttgattttatagttTTTGAGAATCGATC
TTTGAATGTAGCACCCCAGAAAAGTTACGTTGTCTCTCCAGCTATAAACA
CATCGTGGAATTCTTTTGAAGAGACTGTTGCGAGAAGATTTATCCCTTAT
GACAAGGACTTGACAGATTCCGTCACTTTGATCGTGGAGAACAAAGAAAT
CTACGTCAATTCGTACCTCTTAACAACAAATTCGCCCGTTTTTAAAGCAA
TGTTGAACTCTGTGTCTTTCAAAGAGGGCCAAAGTAAAAGAGTTGAGCTT
CCTGGAAAGAAACATTCTGAAATCTTATTCTTCCTGCATCATTTACAGAC
ACCTCAAGATATTGGAAATATTATAGaTTTTCCTGATATTACCATTCTGG
CACCCTTATGTCGTGAATACCAAGTCGATTGGCTGACCAAGAAAATCAAG
GATTTTATAAGAGTCAGAGCAGCACGACTGAACAAAAAGGGAAGCAAAAT
TGTTGCTCTTAATTATCTTTCATTCTCTGAAGAAATAGGTTTCGATGAAA
GTAATGATACGCTGTTGGTTAATTCCTTGTCTTGTGGTTTCCATAGCCTC
CAAACATGCTTAGAGTTTTCAGTGTTGAGTCGCCATAAACAAGTATTGAT
CGCTAGAAAAAGATTATGGCTTTTATTACGACACTTTTTTGACAAGTATC
GAGATCTGATCCTTAATGAAGAAGGCTTTGGATTTCTTTCGCTTTTTGAG
GAACAAAcggtttttgattttcagtacAATAAAACTGAATGTGCTTACAT
TAAAGAGTTTCAAGAAAAACATGGCAAAGgcgagtga

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_000736	XLOC_000736	Clytia hemisphaerica	gene

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00001385-protein	TCONS_00001385-protein	Clytia hemisphaerica	polypeptide

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000010	supercontig	sc0000010:792508..799122 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.1588	5.18043	3.29248	2.58596	1.58492	0.654635	1.46721	1.22062	1.07781	0.864246	1.73532	0.996549	1.69598	1.49404	2.16485	2.70938	1.86643	1.52206	2.33128	1.42379	1.27702	1.21473	4.07657	1.54623	1.72461	1.84402	0.392539	0.376312	4.94631	2.39

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR000210	BTB/POZ_dom
IPR011333	SKP1/BTB/POZ

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This transcript is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding

Blast

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BLAST of TCONS_00001385 vs. Swiss-Prot (Human)
Match: TIM13 (Mitochondrial import inner membrane translocase subunit Tim13 OS=Homo sapiens GN=TIMM13 PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 3.556e-30
Identity = 51/72 (70.83%), Postives = 62/72 (86.11%), Query Frame = 2

Query:  149 MMEAVKQQIAVANAQELLSKMSDKCFKKCITKPGANLDNSEQKCLAMCMDRYMEAWNLVSQTYTNRLNKEHS 364
            +ME VK QIAVANAQELL +M+DKCF+KCI KPG +LDNSEQKC+AMCMDRYM+AWN VS+ Y +RL +E +
Sbjct:   22 IMEQVKVQIAVANAQELLQRMTDKCFRKCIGKPGGSLDNSEQKCIAMCMDRYMDAWNTVSRAYNSRLQRERA 93

The following BLAST results are available for this feature:

BLAST of TCONS_00001385 vs. Swiss-Prot (Human)

BLAST of TCONS_00001385 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
TIM13	3.556e-30	70.83	Mitochondrial import inner membrane translocase su...	[more]

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TCONS_00001385 (transcript) - C. hemisphaerica