XLOC_000519 (gene) - C. hemisphaerica

Overview
NameXLOC_000519
Unique NameXLOC_000519
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000005:1331049..1336734-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000519 ID=XLOC_000519|Name=XLOC_000519|organism=Clytia hemisphaerica|type=gene|length=5686bp|location=Sequence derived from alignment at sc0000005:1331049..1336734- (Clytia hemisphaerica)
CTAGAAATAAACATTAAGCATTATTGGAAAGATCTGTATGGTTATGTAAC
CTAGGTTACGGATTTTATCGTGACAAAAAGAAGAGAGAATATGGAGCTTC
AAGAGACGACTTTAAGAAATACAAATACAATATGCGATGCAAGTGACACA
GGAGTACAAAAAGATAAACATCAAAAGAAAACAGACATGCTATCATCCGA
TATGGAAACCAATACCAATCACGGTAAGAGCTTTTATTCATGTATGACTA
TGGAGATAATTGTGAAATACCAGTGGAGAAAGGTGATTTCAAAAGGAGAA
AGGTCTTAAATTCCGTTGATCCATAGAGGTATAAAGAAAGACAGGAGATG
AATTTGTCGGTAATTGGTCGTTAAAGTCTTTTGATTTCTTTTATGTAATA
AATCAAAAGAAATTCTAGGCTCGCCCGACGAAATAGGACTTTTTAGTAGA
ACTCAAGTCTGTTTTGAACATTCTGACTATCAGCATCGAAGATTTCTAGC
CTTCTAATATACGAGAATAAAATAAAATTTAGCTCCACGAAATTAGTTTG
CGTTCAATTTTGGCATCCATTAAATTTTGTTTTGAAAAGATATTTTCTCT
AGCCAGAAAATAAAAAGTTCTTTATAAGCACACACAATTTCAGACCCAAT
TTGTAGACAAAAAGTCGCTGGAGAATTTTGGAGGAAAGCNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNCAACACTTAAGTTAGCCAATAAGATTTCA
CCTATCAACAAAAGAGCTCATTAAAAATGCACGATATATGAGATTATGAG
CATGCATACCTCGTAATTTTTTTATTCGTAGGGCGAGCATGGCTACAATA
GCATACTTCTCCTGTTTCTTTATACCTCCATGGTTGATCCGTTGTGCATT
TTTTAATAAAATTATCCATCTCCTATGTATTGAGTTTTGAGGCAGATTTA
TCTTCAAGCATACTATTAGAGGCCCCCAAGCGGTTTTCGTGATGGCGTAG
TAGGGACTTCTTTCTAGCGTGATTACGTGATTTGGGCGTGATTTGGAAAT
GTTTTTTCTTGATTGCATGATCAGAGGTGAAAACGTGATCATGATTTGAA
AGATTTTAGAGCAGTGAATCTTTTTAGAAAGGGATGTGTGATTATCAAAT
TTTTTTGATCGTGATCGAAGACAAAAATTGCGTGATATCGTGATCAGACT
TGCCGCTGAGAGGCCTCCTATTAGCCTCTATTTCTTAGCCTCTATGCCTG
ATTCAATTCATTTTTTTTAGCCTACAAATCGGAAGCATACTTGCTGCGTA
TACAAGTGCTCACTTTCTCTACCCGTAGTTTTTTTCAAAATTGGAAAGGA
ATGAAATGGAATGATGACGCTATTGTTTTTGTCGTTAATTGATGTTATAT
CTCTATCTCCGTGGTTTATAAGAACTCAATCGAAGCTAAAAAAAAATCCT
TAACCTTAAAAGTGTTTATAATATTCAATTAAAGAACAATTACTTTTCAA
GTATTAAGTTTTTCTCACTGCCCTCTCTAATTAGCTTGTTTTGAGTACAT
TTTTTATAAATTTCAAATAAATTTTTAGAAATTTAGGACCAAATAACGGT
ATAAAGCACATTTTATTACAAGAACTAATTTTTAAATGTTAAACTTTGAA
TGCTTGATTTGTATTTATGATAAAAAATACGTCCTGCGATGGAGTTTGTT
AAAAAGTGAAATTAAATGGACATCGAAAATTGACACTAAACCATAAAAAC
ATTCGTTCTTACGACATAGATACACGCTTTTTTTTATAAGAATGGTGTAA
ATCCATTTCATCATGGACATTCTTATAAAGTGTATTCTTATAAGAAAAAG
CGTGTAGAACAATGATAGAAATTCAGCTCTATTCATTCCAGTCGCGGCTT
TCTTATACTATGGTGATATTCTTAGCATTATTCTTAAATTTTTGGCCATT
TTCATCATGGACATTCTTATAAAGTGTATTCTTATAAGAAAAAGCGTGTA
GAACAATGATAGAAATTCAGCTCTATTCATTCCAGTCGCGGCTTTCTTAT
ACTATGGTGATATTCTTAGCATTATTCTTAAATTTTTGGCCATTTTCATC
ATGGACATTCTTATAAAGTGTATTCTTATAAGAAAAAGCGTGTAGAACAA
TGATAGAAATTCAGCTCTATTCATTCCAGTCGCGGCTTTCTTATACTATG
GTGATATTCTTAGCATTATTCTTAAATTTTTGGCCATTTTCATCATGGAC
ATTCTTATAAAGTGTATTCTTATAAGAAAAAGCGTGTAGAACAATGATAG
AAATTCAGCTCTATTCATTCCAGTCGCGGCTTTCTTATACTATGGTGATA
TTCTTAGCATTATTCTTAAATTTTTGGCCATTTTCATCATGGACATTCTT
ATAAAGTGTATTCTTATAAGAAAAAGCGTGTAGAACAATGATAGAAATTC
AGCTCTATTCATTCCAGTCGCGGCTTTCTTATACTATGGTGATATTCTTA
GCATTATTCTTAAATTTTTGGCCATTTTCATCATGGACATTCTTATAAAG
TGTATTCTTATAAGAAAAAGCGTGTAGAACAATGATAGAAATTCAGCTCT
ATTCATTCCAGTCGCGGCTTTCTTATACTATGGTGATATTCTTAGCATTA
TTCTTAAATTTTTGGCCATTTTCATCATGGACATTCTTATAAAGTGTATT
CTTATAAAAAAAAGCGTGAAGAACAATAATAGAAATTCAGCTCTATTCAT
TCCAGTCGCGGCTTTCTTATACTATGATGTAATTCTTAAGGATTGTATCA
ATTATATTCCCATATAGAAACACACATAGTATAATAATCCGTATCAGATT
TCTTATATCTTTGTTTGGCATAGTGTATGTAAGTTAATGCTGTGAAAATC
TAAGATTTTGACGGTTGATGTTTACTCACGTTTTTGAAAGTACAAGCACG
GACCTTAAAATGCCAGTTTTACTTAAAATGGGGATAATAAGAATTACAGT
AAAAGCTTGAGTCTCGGAGACTTTTTGAGTACTATCAGAATACAAAAAAG
CGAGTTTAGAGTATGATTTTGAATTTTAAACTATAAATTCTTACCTTGGA
AAACATTTCTTTCATTCTCAGGTTCAACAGAAGAAATGACGATGTTAAAA
ATCGATGATTTTTTACGTATGGTTGGTGAGTTTGGTCCCTTTCAATGGAT
CCTTGAGCTATGGTGTATCTTTTTGTATATTGCCCCTGTCTCACAGATTT
ATATCATGTATTTCACAACTCCCGAACCACCAGCCTGGAGATGTGTTAAC
GGAAGTAGTCTGTGCAATCTTAATGGAACACAACCTAGTGATAATAATTA
CCGATGTGAAATACCGAGATCCCAATGGGAATATGTTCAAGGGGAAGGAG
TTTCAACAGTAACTGTTGATTACGATTTAGTCTGTGATTCAAAATGGTTG
ATTTCAATGACCAGTTCCATTTTCTATTTCGGAAAACTGTTTGGAACCTT
TTGCGCTGGTTGGCTAGCCGATAATTATGGTCGTAAAACTGTTCTGTACC
CATCCAATCTATTGTTATTGTCGGCTTCGTTATTAACGACTCTTATGCCG
AATATATGGTCGTTTTTGGTCTGTCGTTTTATTGCTGGATTTGCGACCGA
TGCTACAACCAATCAGGCTCTTCTTTTACTTTCGGAATACGTTTCGACAA
AATACCGACCAATCGCTACTAATATTTTGTGGATGGGTTGGATAGGAACT
TTATGTCTTATGCCGTTACAAGCGTATTTTATAAAACAATGGAAAATGCT
TTTTGTTGTAGCTGTTGTCCCTTATGTGATCGGGTTTTTATCTTACTTTT
TTATCCCAGAATCTGTGCGATGGTTACGCACAAAAGAGAGGTATTCCGAT
GCAAAAAGTATTTTAAGAAGAATGGCACGTTGGAATCATAAAGAACTTGA
TGAAACAGCTGGCATTGAGAGGCCAATCATATCAACAAAACGAACAACAC
CTTTAGACCTGTTCCGAAGAAATCTAGTAGTATCTACTCTAGCCCAAGGC
TGCTTATGGTTTGTTAACGGGCTAGTTTACTATGGTTTATCGTTATCAGC
TGACGACCTTGGAGGATCCATGTATCTCAATTTTGTTTATGTCAGTTTAG
CTGAAATACCATCCGCAATATGTGCTGCTGATTTTTCCAATCGTTTTGGC
CGCAAAAGAACAACGGTTGTTGCGTTGATTTTGGCCGGTGTTTTTTGTAT
CTCCGTACCGTATATACCGTTAACTGAAGCCGGGAAACCAAGCCGTTTAG
CTGTCGGACTTTTGGGTAAATTTTTCTTGACTTTGAGTTTTGATATCATT
ACTATTTGGTCGGTAGAATTATTTCCAACCGATTTGCGTTCAAAAGGATT
AAGTTTTGTTTACATGTGTGGCAATGTAGGATCGACCGCCTCACCATGGA
TCGCCAAAGGATTAAAAGTGTTTTCAGATGAGGTGCCTTTTATCGTTATG
GGTGTCTCCGCCCTAGTTGGTGGGGCGGTTGGATTACTGCTTGAAGAAAC
GAATGGGCGGGATGCTAAAGATACTTTGAATGAATTTCTTGCTGATGGAG
TGGATAATAAGGAAGGTAAAGAATTCTTACAAAATCATAATGCAAATGTA
GAAACTTGAAATGTGATATGGTGAAATTTGCTCTACATTATACACCCATG
TCTCTGTTACCATAAAGATTTCATGAAATGTAAGACACTTTTTTCACCCG
GCGCTATTTTTGAATTTTTTTCAGTTGGGAAATAAAAGGTTCCTCCTGCT
TTCGAGTCAAGGACACAGGGTGTAGACATGGCCATCATACTTGAATATTA
TCAAACAAATCTTCAATATGATGGTGACGTAATAATGATCAATGCCGTAT
ATCATCTTGAAGAAAAGTATCTTAGCTGTCAGAGAGAGTTTTAACTAAAA
TAAGCCAAGATTCTAATTATATATTTAACCATTTTTGGAAATTTATGCTA
AATTACGGCCACATGTTAATCTCAGGCAAATTAAGGCCTGTCCAGATTTT
TCAAATTTACCCAAATTTTTTATCACCGTTTCCACTTGTCATATCATATC
ACTTCATACATCGAAAGAAGCGTATTGGAGTGTAGATCACTGGAATGGCT
GTGCCATAATTAATTTTTTCACCCAAAAAAAGATATTAGGCAAAAACCAA
AAAATGCTGACGTCAGCAAACTTGTTTCTTGAATAACTCCAGTTTGGCTT
ATGGTAAAAACATGAAATTTGGACCAAAGTTGCACACTATTAAAAGGACC
ATTTTGAAAAAAAGATTTTTTGAAGTTTTGCTGACGACAGCACTTTATTG
CAAGATTTCGTATTTTGCTGATTTCTGCTGACGTCAGCAAAATTTTGAAA
AAGAAATTATGCAAAAATGTTCCTATTAATGATATG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00000879TCONS_00000879Clytia hemisphaericatranscript
TCONS_00000878TCONS_00000878Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00000879-proteinTCONS_00000879-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000005supercontigsc0000005:1331049..1336734 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.46	0.53	0.55	0.53	2.16	1.66	1.04	1.19	1.17	1.5	1.16	1.08	5.96	5.43	6.25	7.42	4.74	3.58	5	4.11	2.15	1.65	6.18	6.51	3.14	3.47	9.44	6.19	3.12	2.99