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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00000879 ID=TCONS_00000879|Name=TCONS_00000879|organism=Clytia hemisphaerica|type=transcript|length=2379bp
CTAGAAATAAACATTAAGCATTATTGGAAAGATCTGTATGGTTATGTAAC
CTAGGTTACGGATTTTATCGTGACAAAAAGAAGAGAGAATATGGAGCTTC
AAGAGACGACTTTAAGAAATACAAATACAATATGCGATGCAAGTGACACA
GGAGTACAAAAAGATAAACATCAAAAGAAAACAGACATGCTATCATCCGA
TATGGAAACCAATACCAATCACGGTTCAACAGAAGAAATGACGATGTTAA
AAATCGATGATTTTTTACGTATGGTTGGTGAGTTTGGTCCCTTTCAATGG
ATCCTTGAGCTATGGTGTATCTTTTTGTATATTGCCCCTGTCTCACAGAT
TTATATCATGTATTTCACAACTCCCGAACCACCAGCCTGGAGATGTGTTA
ACGGAAGTAGTCTGTGCAATCTTAATGGAACACAACCTAGTGATAATAAT
TACCGATGTGAAATACCGAGATCCCAATGGGAATATGTTCAAGGGGAAGG
AGTTTCAACAGTAACTGTTGATTACGATTTAGTCTGTGATTCAAAATGGT
TGATTTCAATGACCAGTTCCATTTTCTATTTCGGAAAACTGTTTGGAACC
TTTTGCGCTGGTTGGCTAGCCGATAATTATGGTCGTAAAACTGTTCTGTA
CCCATCCAATCTATTGTTATTGTCGGCTTCGTTATTAACGACTCTTATGC
CGAATATATGGTCGTTTTTGGTCTGTCGTTTTATTGCTGGATTTGCGACC
GATGCTACAACCAATCAGGCTCTTCTTTTACTTTCGGAATACGTTTCGAC
AAAATACCGACCAATCGCTACTAATATTTTGTGGATGGGTTGGATAGGAA
CTTTATGTCTTATGCCGTTACAAGCGTATTTtataaaacaatggaaaatg
cTTTTTGTTGTAGCTGTTGTCCCTTATGTGATCGGGTTTTTATCTTACTT
TTTTATCCCAGAATCTGTGCGATGGTTACGCACAAAAGAGAGGTATTCCG
ATgcaaaaagtattttaagaagAATGGCACGTTGGAATCATAAAGAACTT
GATGAAACAGCTGGCATTGAGAGGCCAATCATATCAACAAAACGAACAAC
ACCTTTAGACCTGTTCCGAAGAAATCTAGTAGTATCTACTCTAGCCCAAG
GCTGCTTATGGTTTGTTAACGGGCTAGTTTACTATGGTTTATCGTTATCA
GCTGACGACCTTGGAGGATCCATGTATCTCAATTTTGTTTATGTCAGTTT
AGCTGAAATACCATCCGCAATATGTGCTGCTGATTTTTCCAATCGTTTTG
GCCGCAAAAGAACAACGGTTGTTGCGTTGATTTTGGCCGGTGTTTTTTGT
ATCTCCGTACCGTATATACCGTTAACTGAAGCCGGGAAACCAAGCCGTTT
AGCTGTCGGACTTTTGGGtaaatttttcttgactttgaGTTTTGATATCA
TTACTATTTGGTCGGTAGAATTATTTCCAACcgatttgcgttcaaaagga
ttAAGTTTTGTTTACATGTGTGGCAATGTAGGATCGACCGCCTCACCATG
GATCGCCAAAGGATTAAAAGTGTTTTCAGATGAGGTGCCTTTTATCGTTA
TGGGTGTCTCCGCCCTAGTTGGTGGGGCGGTTGGATTACTGCTTGAAGAA
ACGAATGGGCGGGATGCTAAAGATACTTTGAATGAATTTCTTGCTGATGG
AGTGGATAATAAGGAAGttgGGAAATAAAAGGTTCCTCCTGCTTTCGAGT
CAAGGACACAGGGTGTAGACATGGCCATCATACTTGAATATTATCAAACA
AATCTTCAATATGATGGTGACGTAATAATGATCAATGCCGTATATCATCT
TGAAGAAAAGTATCTTAGCTGTCAGAGAGAGTTTTAACTAAAATAAGCCA
AGATTCTAATTATATATTTAaccatttttggaaatttatgcTAAATTACG
GCCACATGTTAatctcaggcaaattaaggcctgtccagatttttcaaatt
tacccaaattttttatcaccgtttccacttgtcatatcatatcacttcat
acatcgaaagaagcgtattggagtgtagatcactggaatggctgtgccat
aattaattttttcacccaaaaaaagatattaggcaaaaaccaaaaaatgc
tgacgtcagcaaacttgtttcttgaataactccagtttggcttatggtaa
aaacatgaaatttggaccaaagttgcacactATTAAAAggaccattttga
aaaaaagattttttgaagttttgctgacgacagcactttattgcaagatt
tcgtattttgctgatttctgctgacgtcagcaaaattttgaaaaagaaat
tatgcaaaaatgttcctattaatgatatg Run BLAST on NCBI protein sequence of TCONS_00000879-protein >TCONS_00000879-protein ID=TCONS_00000879-protein|Name=TCONS_00000879-protein|organism=Clytia hemisphaerica|type=polypeptide|length=545bp
MELQETTLRNTNTICDASDTGVQKDKHQKKTDMLSSDMETNTNHGSTEEM
TMLKIDDFLRMVGEFGPFQWILELWCIFLYIAPVSQIYIMYFTTPEPPAW
RCVNGSSLCNLNGTQPSDNNYRCEIPRSQWEYVQGEGVSTVTVDYDLVCD
SKWLISMTSSIFYFGKLFGTFCAGWLADNYGRKTVLYPSNLLLLSASLLT
TLMPNIWSFLVCRFIAGFATDATTNQALLLLSEYVSTKYRPIATNILWMG
WIGTLCLMPLQAYFIKQWKMLFVVAVVPYVIGFLSYFFIPESVRWLRTKE
RYSDAKSILRRMARWNHKELDETAGIERPIISTKRTTPLDLFRRNLVVST
LAQGCLWFVNGLVYYGLSLSADDLGGSMYLNFVYVSLAEIPSAICAADFS
NRFGRKRTTVVALILAGVFCISVPYIPLTEAGKPSRLAVGLLGKFFLTLS
FDIITIWSVELFPTDLRSKGLSFVYMCGNVGSTASPWIAKGLKVFSDEVP
FIVMGVSALVGGAVGLLLEETNGRDAKDTLNEFLADGVDNKEVGK Run BLAST on NCBI transcript from alignment at sc0000005:1331049..1336734- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00000879 ID=TCONS_00000879|Name=TCONS_00000879|organism=Clytia hemisphaerica|type=transcript|length=5686bp|location=Sequence derived from alignment at sc0000005:1331049..1336734- (Clytia hemisphaerica)
CTAGAAATAAACATTAAGCATTATTGGAAAGATCTGTATGGTTATGTAAC
CTAGGTTACGGATTTTATCGTGACAAAAAGAAGAGAGAATATGGAGCTTC
AAGAGACGACTTTAAGAAATACAAATACAATATGCGATGCAAGTGACACA
GGAGTACAAAAAGATAAACATCAAAAGAAAACAGACATGCTATCATCCGA
TATGGAAACCAATACCAATCACGGTAAGAGCTTTTATTCATGTATGACTA
TGGAGATAATTGTGAAATACCAGTGGAGAAAGGTGATTTCAAAAGGAGAA
AGGTCTTAAATTCCGTTGATCCATAGAGGTATAAAGAAAGACAGGAGATG
AATTTGTCGGTAATTGGTCGTTAAAGTCTTTTGATTTCTTTTATGTAATA
AATCAAAAGAAATTCTAGGCTCGCCCGACGAAATAGGACTTTTTAGTAGA
ACTCAAGTCTGTTTTGAACATTCTGACTATCAGCATCGAAGATTTCTAGC
CTTCTAATATACGAGAATAAAATAAAATTTAGCTCCACGAAATTAGTTTG
CGTTCAATTTTGGCATCCATTAAATTTTGTTTTGAAAAGATATTTTCTCT
AGCCAGAAAATAAAAAGTTCTTTATAAGCACACACAATTTCAGACCCAAT
TTGTAGACAAAAAGTCGCTGGAGAATTTTGGAGGAAAGCNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNCAACACTTAAGTTAGCCAATAAGATTTCA
CCTATCAACAAAAGAGCTCATTAAAAATGCACGATATATGAGATTATGAG
CATGCATACCTCGTAATTTTTTTATTCGTAGGGCGAGCATGGCTACAATA
GCATACTTCTCCTGTTTCTTTATACCTCCATGGTTGATCCGTTGTGCATT
TTTTAATAAAATTATCCATCTCCTATGTATTGAGTTTTGAGGCAGATTTA
TCTTCAAGCATACTATTAGAGGCCCCCAAGCGGTTTTCGTGATGGCGTAG
TAGGGACTTCTTTCTAGCGTGATTACGTGATTTGGGCGTGATTTGGAAAT
GTTTTTTCTTGATTGCATGATCAGAGGTGAAAACGTGATCATGATTTGAA
AGATTTTAGAGCAGTGAATCTTTTTAGAAAGGGATGTGTGATTATCAAAT
TTTTTTGATCGTGATCGAAGACAAAAATTGCGTGATATCGTGATCAGACT
TGCCGCTGAGAGGCCTCCTATTAGCCTCTATTTCTTAGCCTCTATGCCTG
ATTCAATTCATTTTTTTTAGCCTACAAATCGGAAGCATACTTGCTGCGTA
TACAAGTGCTCACTTTCTCTACCCGTAGTTTTTTTCAAAATTGGAAAGGA
ATGAAATGGAATGATGACGCTATTGTTTTTGTCGTTAATTGATGTTATAT
CTCTATCTCCGTGGTTTATAAGAACTCAATCGAAGCTAAAAAAAAATCCT
TAACCTTAAAAGTGTTTATAATATTCAATTAAAGAACAATTACTTTTCAA
GTATTAAGTTTTTCTCACTGCCCTCTCTAATTAGCTTGTTTTGAGTACAT
TTTTTATAAATTTCAAATAAATTTTTAGAAATTTAGGACCAAATAACGGT
ATAAAGCACATTTTATTACAAGAACTAATTTTTAAATGTTAAACTTTGAA
TGCTTGATTTGTATTTATGATAAAAAATACGTCCTGCGATGGAGTTTGTT
AAAAAGTGAAATTAAATGGACATCGAAAATTGACACTAAACCATAAAAAC
ATTCGTTCTTACGACATAGATACACGCTTTTTTTTATAAGAATGGTGTAA
ATCCATTTCATCATGGACATTCTTATAAAGTGTATTCTTATAAGAAAAAG
CGTGTAGAACAATGATAGAAATTCAGCTCTATTCATTCCAGTCGCGGCTT
TCTTATACTATGGTGATATTCTTAGCATTATTCTTAAATTTTTGGCCATT
TTCATCATGGACATTCTTATAAAGTGTATTCTTATAAGAAAAAGCGTGTA
GAACAATGATAGAAATTCAGCTCTATTCATTCCAGTCGCGGCTTTCTTAT
ACTATGGTGATATTCTTAGCATTATTCTTAAATTTTTGGCCATTTTCATC
ATGGACATTCTTATAAAGTGTATTCTTATAAGAAAAAGCGTGTAGAACAA
TGATAGAAATTCAGCTCTATTCATTCCAGTCGCGGCTTTCTTATACTATG
GTGATATTCTTAGCATTATTCTTAAATTTTTGGCCATTTTCATCATGGAC
ATTCTTATAAAGTGTATTCTTATAAGAAAAAGCGTGTAGAACAATGATAG
AAATTCAGCTCTATTCATTCCAGTCGCGGCTTTCTTATACTATGGTGATA
TTCTTAGCATTATTCTTAAATTTTTGGCCATTTTCATCATGGACATTCTT
ATAAAGTGTATTCTTATAAGAAAAAGCGTGTAGAACAATGATAGAAATTC
AGCTCTATTCATTCCAGTCGCGGCTTTCTTATACTATGGTGATATTCTTA
GCATTATTCTTAAATTTTTGGCCATTTTCATCATGGACATTCTTATAAAG
TGTATTCTTATAAGAAAAAGCGTGTAGAACAATGATAGAAATTCAGCTCT
ATTCATTCCAGTCGCGGCTTTCTTATACTATGGTGATATTCTTAGCATTA
TTCTTAAATTTTTGGCCATTTTCATCATGGACATTCTTATAAAGTGTATT
CTTATAAAAAAAAGCGTGAAGAACAATAATAGAAATTCAGCTCTATTCAT
TCCAGTCGCGGCTTTCTTATACTATGATGTAATTCTTAAGGATTGTATCA
ATTATATTCCCATATAGAAACACACATAGTATAATAATCCGTATCAGATT
TCTTATATCTTTGTTTGGCATAGTGTATGTAAGTTAATGCTGTGAAAATC
TAAGATTTTGACGGTTGATGTTTACTCACGTTTTTGAAAGTACAAGCACG
GACCTTAAAATGCCAGTTTTACTTAAAATGGGGATAATAAGAATTACAGT
AAAAGCTTGAGTCTCGGAGACTTTTTGAGTACTATCAGAATACAAAAAAG
CGAGTTTAGAGTATGATTTTGAATTTTAAACTATAAATTCTTACCTTGGA
AAACATTTCTTTCATTCTCAGGTTCAACAGAAGAAATGACGATGTTAAAA
ATCGATGATTTTTTACGTATGGTTGGTGAGTTTGGTCCCTTTCAATGGAT
CCTTGAGCTATGGTGTATCTTTTTGTATATTGCCCCTGTCTCACAGATTT
ATATCATGTATTTCACAACTCCCGAACCACCAGCCTGGAGATGTGTTAAC
GGAAGTAGTCTGTGCAATCTTAATGGAACACAACCTAGTGATAATAATTA
CCGATGTGAAATACCGAGATCCCAATGGGAATATGTTCAAGGGGAAGGAG
TTTCAACAGTAACTGTTGATTACGATTTAGTCTGTGATTCAAAATGGTTG
ATTTCAATGACCAGTTCCATTTTCTATTTCGGAAAACTGTTTGGAACCTT
TTGCGCTGGTTGGCTAGCCGATAATTATGGTCGTAAAACTGTTCTGTACC
CATCCAATCTATTGTTATTGTCGGCTTCGTTATTAACGACTCTTATGCCG
AATATATGGTCGTTTTTGGTCTGTCGTTTTATTGCTGGATTTGCGACCGA
TGCTACAACCAATCAGGCTCTTCTTTTACTTTCGGAATACGTTTCGACAA
AATACCGACCAATCGCTACTAATATTTTGTGGATGGGTTGGATAGGAACT
TTATGTCTTATGCCGTTACAAGCGTATTTTATAAAACAATGGAAAATGCT
TTTTGTTGTAGCTGTTGTCCCTTATGTGATCGGGTTTTTATCTTACTTTT
TTATCCCAGAATCTGTGCGATGGTTACGCACAAAAGAGAGGTATTCCGAT
GCAAAAAGTATTTTAAGAAGAATGGCACGTTGGAATCATAAAGAACTTGA
TGAAACAGCTGGCATTGAGAGGCCAATCATATCAACAAAACGAACAACAC
CTTTAGACCTGTTCCGAAGAAATCTAGTAGTATCTACTCTAGCCCAAGGC
TGCTTATGGTTTGTTAACGGGCTAGTTTACTATGGTTTATCGTTATCAGC
TGACGACCTTGGAGGATCCATGTATCTCAATTTTGTTTATGTCAGTTTAG
CTGAAATACCATCCGCAATATGTGCTGCTGATTTTTCCAATCGTTTTGGC
CGCAAAAGAACAACGGTTGTTGCGTTGATTTTGGCCGGTGTTTTTTGTAT
CTCCGTACCGTATATACCGTTAACTGAAGCCGGGAAACCAAGCCGTTTAG
CTGTCGGACTTTTGGGTAAATTTTTCTTGACTTTGAGTTTTGATATCATT
ACTATTTGGTCGGTAGAATTATTTCCAACCGATTTGCGTTCAAAAGGATT
AAGTTTTGTTTACATGTGTGGCAATGTAGGATCGACCGCCTCACCATGGA
TCGCCAAAGGATTAAAAGTGTTTTCAGATGAGGTGCCTTTTATCGTTATG
GGTGTCTCCGCCCTAGTTGGTGGGGCGGTTGGATTACTGCTTGAAGAAAC
GAATGGGCGGGATGCTAAAGATACTTTGAATGAATTTCTTGCTGATGGAG
TGGATAATAAGGAAGGTAAAGAATTCTTACAAAATCATAATGCAAATGTA
GAAACTTGAAATGTGATATGGTGAAATTTGCTCTACATTATACACCCATG
TCTCTGTTACCATAAAGATTTCATGAAATGTAAGACACTTTTTTCACCCG
GCGCTATTTTTGAATTTTTTTCAGTTGGGAAATAAAAGGTTCCTCCTGCT
TTCGAGTCAAGGACACAGGGTGTAGACATGGCCATCATACTTGAATATTA
TCAAACAAATCTTCAATATGATGGTGACGTAATAATGATCAATGCCGTAT
ATCATCTTGAAGAAAAGTATCTTAGCTGTCAGAGAGAGTTTTAACTAAAA
TAAGCCAAGATTCTAATTATATATTTAACCATTTTTGGAAATTTATGCTA
AATTACGGCCACATGTTAATCTCAGGCAAATTAAGGCCTGTCCAGATTTT
TCAAATTTACCCAAATTTTTTATCACCGTTTCCACTTGTCATATCATATC
ACTTCATACATCGAAAGAAGCGTATTGGAGTGTAGATCACTGGAATGGCT
GTGCCATAATTAATTTTTTCACCCAAAAAAAGATATTAGGCAAAAACCAA
AAAATGCTGACGTCAGCAAACTTGTTTCTTGAATAACTCCAGTTTGGCTT
ATGGTAAAAACATGAAATTTGGACCAAAGTTGCACACTATTAAAAGGACC
ATTTTGAAAAAAAGATTTTTTGAAGTTTTGCTGACGACAGCACTTTATTG
CAAGATTTCGTATTTTGCTGATTTCTGCTGACGTCAGCAAAATTTTGAAA
AAGAAATTATGCAAAAATGTTCCTATTAATGATATG Coding sequence (CDS) from alignment at sc0000005:1331049..1336734- >TCONS_00000879 ID=TCONS_00000879|Name=TCONS_00000879|organism=Clytia hemisphaerica|type=CDS|length=4914bp|location=Sequence derived from alignment at sc0000005:1331049..1336734- (Clytia hemisphaerica)
TTGGGAAATAAGTTCAACAGAAGAAATGACGATGTTAAAAATCGATGATT
TTTTACGTATGGTTGGTGAGTTTGGTCCCTTTCAATGGATCCTTGAGCTA
TGGTGTATCTTTTTGTATATTGCCCCTGTCTCACAGATTTATATCATGTA
TTTCACAACTCCCGAACCACCAGCCTGGAGATGTGTTAACGGAAGTAGTC
TGTGCAATCTTAATGGAACACAACCTAGTGATAATAATTACCGATGTGAA
ATACCGAGATCCCAATGGGAATATGTTCAAGGGGAAGGAGTTTCAACAGT
AACTGTTGATTACGATTTAGTCTGTGATTCAAAATGGTTGATTTCAATGA
CCAGTTCCATTTTCTATTTCGGAAAACTGTTTGGAACCTTTTGCGCTGGT
TGGCTAGCCGATAATTATGGTCGTAAAACTGTTCTGTACCCATCCAATCT
ATTGTTATTGTCGGCTTCGTTATTAACGACTCTTATGCCGAATATATGGT
CGTTTTTGGTCTGTCGTTTTATTGCTGGATTTGCGACCGATGCTACAACC
AATCAGGCTCTTCTTTTACTTTCGGAATACGTTTCGACAAAATACCGACC
AATCGCTACTAATATTTTGTGGATGGGTTGGATAGGAACTTTATGTCTTA
TGCCGTTACAAGCGTATTTTATAAAACAATGGAAAATGCTTTTTGTTGTA
GCTGTTGTCCCTTATGTGATCGGGTTTTTATCTTACTTTTTTATCCCAGA
ATCTGTGCGATGGTTACGCACAAAAGAGAGGTATTCCGATGCAAAAAGTA
TTTTAAGAAGAATGGCACGTTGGAATCATAAAGAACTTGATGAAACAGCT
GGCATTGAGAGGCCAATCATATCAACAAAACGAACAACACCTTTAGACCT
GTTCCGAAGAAATCTAGTAGTATCTACTCTAGCCCAAGGCTGCTTATGGT
TTGTTAACGGGCTAGTTTACTATGGTTTATCGTTATCAGCTGACGACCTT
GGAGGATCCATGTATCTCAATTTTGTTTATGTCAGTTTAGCTGAAATACC
ATCCGCAATATGTGCTGCTGATTTTTCCAATCGTTTTGGCCGCAAAAGAA
CAACGGTTGTTGCGTTGATTTTGGCCGGTGTTTTTTGTATCTCCGTACCG
TATATACCGTTAACTGAAGCCGGGAAACCAAGCCGTTTAGCTGTCGGACT
TTTGGGTAAATTTTTCTTGACTTTGAGTTTTGATATCATTACTATTTGGT
CGGTAGAATTATTTCCAACCGATTTGCGTTCAAAAGGATTAAGTTTTGTT
TACATGTGTGGCAATGTAGGATCGACCGCCTCACCATGGATCGCCAAAGG
ATTAAAAGTGTTTTCAGATGAGGTGCCTTTTATCGTTATGGGTGTCTCCG
CCCTAGTTGGTGGGGCGGTTGGATTACTGCTTGAAGAAACGAATGGGCGG
GATGCTAAAGATACTTTGAATGAATTTCTTGCTGATGGAGTGGATAATAA
GGAAGATGGAGCTTCAAGAGACGACTTTAAGAAATACAAATACAATATGC
GATGCAAGTGACACAGGAGTACAAAAAGATAAACATCAAAAGAAAACAGA
CATGCTATCATCCGATATGGAAACCAATACCAATCACGTTGGGAAATAAG
TTCAACAGAAGAAATGACGATGTTAAAAATCGATGATTTTTTACGTATGG
TTGGTGAGTTTGGTCCCTTTCAATGGATCCTTGAGCTATGGTGTATCTTT
TTGTATATTGCCCCTGTCTCACAGATTTATATCATGTATTTCACAACTCC
CGAACCACCAGCCTGGAGATGTGTTAACGGAAGTAGTCTGTGCAATCTTA
ATGGAACACAACCTAGTGATAATAATTACCGATGTGAAATACCGAGATCC
CAATGGGAATATGTTCAAGGGGAAGGAGTTTCAACAGTAACTGTTGATTA
CGATTTAGTCTGTGATTCAAAATGGTTGATTTCAATGACCAGTTCCATTT
TCTATTTCGGAAAACTGTTTGGAACCTTTTGCGCTGGTTGGCTAGCCGAT
AATTATGGTCGTAAAACTGTTCTGTACCCATCCAATCTATTGTTATTGTC
GGCTTCGTTATTAACGACTCTTATGCCGAATATATGGTCGTTTTTGGTCT
GTCGTTTTATTGCTGGATTTGCGACCGATGCTACAACCAATCAGGCTCTT
CTTTTACTTTCGGAATACGTTTCGACAAAATACCGACCAATCGCTACTAA
TATTTTGTGGATGGGTTGGATAGGAACTTTATGTCTTATGCCGTTACAAG
CGTATTTTATAAAACAATGGAAAATGCTTTTTGTTGTAGCTGTTGTCCCT
TATGTGATCGGGTTTTTATCTTACTTTTTTATCCCAGAATCTGTGCGATG
GTTACGCACAAAAGAGAGGTATTCCGATGCAAAAAGTATTTTAAGAAGAA
TGGCACGTTGGAATCATAAAGAACTTGATGAAACAGCTGGCATTGAGAGG
CCAATCATATCAACAAAACGAACAACACCTTTAGACCTGTTCCGAAGAAA
TCTAGTAGTATCTACTCTAGCCCAAGGCTGCTTATGGTTTGTTAACGGGC
TAGTTTACTATGGTTTATCGTTATCAGCTGACGACCTTGGAGGATCCATG
TATCTCAATTTTGTTTATGTCAGTTTAGCTGAAATACCATCCGCAATATG
TGCTGCTGATTTTTCCAATCGTTTTGGCCGCAAAAGAACAACGGTTGTTG
CGTTGATTTTGGCCGGTGTTTTTTGTATCTCCGTACCGTATATACCGTTA
ACTGAAGCCGGGAAACCAAGCCGTTTAGCTGTCGGACTTTTGGGTAAATT
TTTCTTGACTTTGAGTTTTGATATCATTACTATTTGGTCGGTAGAATTAT
TTCCAACCGATTTGCGTTCAAAAGGATTAAGTTTTGTTTACATGTGTGGC
AATGTAGGATCGACCGCCTCACCATGGATCGCCAAAGGATTAAAAGTGTT
TTCAGATGAGGTGCCTTTTATCGTTATGGGTGTCTCCGCCCTAGTTGGTG
GGGCGGTTGGATTACTGCTTGAAGAAACGAATGGGCGGGATGCTAAAGAT
ACTTTGAATGAATTTCTTGCTGATGGAGTGGATAATAAGGAAGATGGAGC
TTCAAGAGACGACTTTAAGAAATACAAATACAATATGCGATGCAAGTGAC
ACAGGAGTACAAAAAGATAAACATCAAAAGAAAACAGACATGCTATCATC
CGATATGGAAACCAATACCAATCACGTTGGGAAATAAGTTCAACAGAAGA
AATGACGATGTTAAAAATCGATGATTTTTTACGTATGGTTGGTGAGTTTG
GTCCCTTTCAATGGATCCTTGAGCTATGGTGTATCTTTTTGTATATTGCC
CCTGTCTCACAGATTTATATCATGTATTTCACAACTCCCGAACCACCAGC
CTGGAGATGTGTTAACGGAAGTAGTCTGTGCAATCTTAATGGAACACAAC
CTAGTGATAATAATTACCGATGTGAAATACCGAGATCCCAATGGGAATAT
GTTCAAGGGGAAGGAGTTTCAACAGTAACTGTTGATTACGATTTAGTCTG
TGATTCAAAATGGTTGATTTCAATGACCAGTTCCATTTTCTATTTCGGAA
AACTGTTTGGAACCTTTTGCGCTGGTTGGCTAGCCGATAATTATGGTCGT
AAAACTGTTCTGTACCCATCCAATCTATTGTTATTGTCGGCTTCGTTATT
AACGACTCTTATGCCGAATATATGGTCGTTTTTGGTCTGTCGTTTTATTG
CTGGATTTGCGACCGATGCTACAACCAATCAGGCTCTTCTTTTACTTTCG
GAATACGTTTCGACAAAATACCGACCAATCGCTACTAATATTTTGTGGAT
GGGTTGGATAGGAACTTTATGTCTTATGCCGTTACAAGCGTATTTTATAA
AACAATGGAAAATGCTTTTTGTTGTAGCTGTTGTCCCTTATGTGATCGGG
TTTTTATCTTACTTTTTTATCCCAGAATCTGTGCGATGGTTACGCACAAA
AGAGAGGTATTCCGATGCAAAAAGTATTTTAAGAAGAATGGCACGTTGGA
ATCATAAAGAACTTGATGAAACAGCTGGCATTGAGAGGCCAATCATATCA
ACAAAACGAACAACACCTTTAGACCTGTTCCGAAGAAATCTAGTAGTATC
TACTCTAGCCCAAGGCTGCTTATGGTTTGTTAACGGGCTAGTTTACTATG
GTTTATCGTTATCAGCTGACGACCTTGGAGGATCCATGTATCTCAATTTT
GTTTATGTCAGTTTAGCTGAAATACCATCCGCAATATGTGCTGCTGATTT
TTCCAATCGTTTTGGCCGCAAAAGAACAACGGTTGTTGCGTTGATTTTGG
CCGGTGTTTTTTGTATCTCCGTACCGTATATACCGTTAACTGAAGCCGGG
AAACCAAGCCGTTTAGCTGTCGGACTTTTGGGTAAATTTTTCTTGACTTT
GAGTTTTGATATCATTACTATTTGGTCGGTAGAATTATTTCCAACCGATT
TGCGTTCAAAAGGATTAAGTTTTGTTTACATGTGTGGCAATGTAGGATCG
ACCGCCTCACCATGGATCGCCAAAGGATTAAAAGTGTTTTCAGATGAGGT
GCCTTTTATCGTTATGGGTGTCTCCGCCCTAGTTGGTGGGGCGGTTGGAT
TACTGCTTGAAGAAACGAATGGGCGGGATGCTAAAGATACTTTGAATGAA
TTTCTTGCTGATGGAGTGGATAATAAGGAAGATGGAGCTTCAAGAGACGA
CTTTAAGAAATACAAATACAATATGCGATGCAAGTGACACAGGAGTACAA
AAAGATAAACATCAAAAGAAAACAGACATGCTATCATCCGATATGGAAAC
CAATACCAATCACG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00000879-exon-sc0000005-1575043694:1336512..1336734 | TCONS_00000879-exon-sc0000005-1575043694:1336512..1336734 | Clytia hemisphaerica | exon |
| TCONS_00000879-exon-sc0000005-1575043694:1331870..1333363 | TCONS_00000879-exon-sc0000005-1575043694:1331870..1333363 | Clytia hemisphaerica | exon |
| TCONS_00000879-exon-sc0000005-1575043694:1331049..1331710 | TCONS_00000879-exon-sc0000005-1575043694:1331049..1331710 | Clytia hemisphaerica | exon |
| TCONS_00000879-exon-sc0000005-1510915933:1336512..1336734 | TCONS_00000879-exon-sc0000005-1510915933:1336512..1336734 | Clytia hemisphaerica | exon |
| TCONS_00000879-exon-sc0000005-1510915933:1331870..1333363 | TCONS_00000879-exon-sc0000005-1510915933:1331870..1333363 | Clytia hemisphaerica | exon |
| TCONS_00000879-exon-sc0000005-1510915933:1331049..1331710 | TCONS_00000879-exon-sc0000005-1510915933:1331049..1331710 | Clytia hemisphaerica | exon |
| TCONS_00000879-exon-sc0000005-1491911889:1336512..1336734 | TCONS_00000879-exon-sc0000005-1491911889:1336512..1336734 | Clytia hemisphaerica | exon |
| TCONS_00000879-exon-sc0000005-1491911889:1331870..1333363 | TCONS_00000879-exon-sc0000005-1491911889:1331870..1333363 | Clytia hemisphaerica | exon |
| TCONS_00000879-exon-sc0000005-1491911889:1331049..1331710 | TCONS_00000879-exon-sc0000005-1491911889:1331049..1331710 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000005 | supercontig | sc0000005:1331049..1336734 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
| GO:0005215 | transporter activity |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0055085 |
transmembrane transport |
| cellular_component |
GO:0016021 |
integral component of membrane |
| molecular_function |
GO:0022857 |
transmembrane transporter activity |
| molecular_function |
GO:0005215 |
transporter activity |
Blast
BLAST of TCONS_00000879 vs. Swiss-Prot (Human)
Match: S22AF (Solute carrier family 22 member 15 OS=Homo sapiens GN=SLC22A15 PE=2 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 1.835e-47 Identity = 131/375 (34.93%), Postives = 194/375 (51.73%), Query Frame = 1
Query: 505 STVTVDYDLVCDSKWLISMTSSIFYFGKLFGTFCAGWLADNYGRKTVLYPSNXXXXXXXXXXXXMPNIWSFLVCRFIAGFATDATTNQALLLLSEYVSTKYRPIATNILWMGWIGTLCLMPLQAYFIKQWKMLFVVAVVPYVIGFLSYFFIPESVRWLRTKERYSDAKSILRRMARWNHKELDETAGIERPIISTKRTTP--LDLFR-RNLVVSTLAQGCLWFVNGLVYYGLSLSADDLGGSMYLNFVYVSLAEIPS-AICAADFSNR-FGRKRTTVVALILAGVFCISVPYIPLTEAGKPSRLAV------GLLGKFFLTLSFDIITIWSVELFPTDLRSKGLSFVYMCGNVGSTASPWIAKGLKVFSDEVPFI 1596
+++ ++ L+ + + +S SS F+ G G G L+D +GRK V L + ++ P+ F V RF+ G + A +LL+E V T Y +A +I + + + L YFI+ W+ L ++ + + FL FIPES RWL ++ R S+A+ L +A+ N K L T + P + R T LDLFR R L+ TL +WFV LVYYGL+LSA DLGGS+Y N L EIPS +C + + FGRKRT L L G+ C+ V ++P E AV LLGK ++ +F+I+ I++ EL+PT +R+ GL M VG +P+I LK +PFI
Sbjct: 95 TSIASEWFLIANRSYKVSAASSFFFSGVFVGVISFGQLSDRFGRKKVYLTGFALDILFAIANGFSPSYEFFAVTRFLVGMMNGGMSLVAFVLLNECVGTAYWALAGSIGGLFFAVGIAQYALLGYFIRSWRTLAILVNLQGTVVFLLSLFIPESPRWLYSQGRLSEAEEALYLIAKRNRK-LKCTFSLTHPANRSCRETGSFLDLFRYRVLLGHTLILMFIWFVCSLVYYGLTLSAGDLGGSIYANLALSGLIEIPSYPLCIYLINQKWFGRKRTLSAFLCLGGLACLIVMFLP--EKKDTGVFAVVNSHSLSLLGKLTISAAFNIVYIYTSELYPTVIRNVGLGTCSMFSRVGGIIAPFIPS-LKYVQWSLPFI 465
The following BLAST results are available for this feature:
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