TCONS_00000879-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00000879-protein
Unique NameTCONS_00000879-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length545

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00000879-protein ID=TCONS_00000879-protein|Name=TCONS_00000879-protein|organism=Clytia hemisphaerica|type=polypeptide|length=545bp
MELQETTLRNTNTICDASDTGVQKDKHQKKTDMLSSDMETNTNHGSTEEM
TMLKIDDFLRMVGEFGPFQWILELWCIFLYIAPVSQIYIMYFTTPEPPAW
RCVNGSSLCNLNGTQPSDNNYRCEIPRSQWEYVQGEGVSTVTVDYDLVCD
SKWLISMTSSIFYFGKLFGTFCAGWLADNYGRKTVLYPSNLLLLSASLLT
TLMPNIWSFLVCRFIAGFATDATTNQALLLLSEYVSTKYRPIATNILWMG
WIGTLCLMPLQAYFIKQWKMLFVVAVVPYVIGFLSYFFIPESVRWLRTKE
RYSDAKSILRRMARWNHKELDETAGIERPIISTKRTTPLDLFRRNLVVST
LAQGCLWFVNGLVYYGLSLSADDLGGSMYLNFVYVSLAEIPSAICAADFS
NRFGRKRTTVVALILAGVFCISVPYIPLTEAGKPSRLAVGLLGKFFLTLS
FDIITIWSVELFPTDLRSKGLSFVYMCGNVGSTASPWIAKGLKVFSDEVP
FIVMGVSALVGGAVGLLLEETNGRDAKDTLNEFLADGVDNKEVGK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000519XLOC_000519Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00000879TCONS_00000879Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005828MFS_sugar_transport-like
IPR005829Sugar_transporter_CS
IPR020846MFS_dom
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
GO:0005215transporter activity
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0022857 transmembrane transporter activity
molecular_function GO:0005215 transporter activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1250.20coord: 65..307
e-value: 3.4E-26
score: 91.3
NoneNo IPR availableGENE3D1.20.1250.20coord: 330..543
e-value: 7.8E-22
score: 77.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 19..45
IPR005828Major facilitator, sugar transporter-likePFAMPF00083Sugar_trcoord: 111..526
e-value: 1.9E-37
score: 129.1
IPR005829Sugar transporter, conserved sitePROSITEPS00216SUGAR_TRANSPORT_1coord: 173..189
IPR020846Major facilitator superfamily domainPROSITEPS50850MFScoord: 71..523
score: 21.14
IPR020846Major facilitator superfamily domainCDDcd06174MFScoord: 151..518
e-value: 5.3713E-28
score: 112.792
IPR020846Major facilitator superfamily domainSUPERFAMILY103473MFS general substrate transportercoord: 151..527

Blast
[Close]
BLAST of TCONS_00000879-protein vs. Swiss-Prot (Human)
Match: S22AD (Solute carrier family 22 member 13 OS=Homo sapiens GN=SLC22A13 PE=2 SV=2)

HSP 1 Score: 193.356 bits (490), Expect = 8.861e-55
Identity = 137/440 (31.14%), Postives = 210/440 (47.73%), Query Frame = 0 
Query:   97 PPAWRCVNGSSLCNLNGTQPSDNNYRCEIPRSQWEYVQGEGVSTVTVDYDLVCDSKWLISMTSSIFYFGKLFGTFCAGWLADNYGRKTVLYPSNLLLLSASLLTTLMPNIWSFLVCRFIAGFATDATTNQALLLLSEYVSTKYRPIATNILWMGW-IGTLCLMPLQAYFIKQWKMLFVVAVVPYVIGFLSYFFIPESVRWLRTKERYSDAKSILRRMARWNHKELD-ETAGIERPIISTKRTTPLDLFRR-NLVVSTLAQGCLWFVNGLVYYGLSLSADDLGGSMYLNFVYVSLAEIPSAICAADFSNRFGRKRTTVVALILAGVFCISVPYIPLTEAGKPSRLAVGLLGKFFLTLSFDIITIWSVELFPTDLRSKGLSFVYMCGNVGSTASPWIAKGLKVFSDEVPFIVMGVSALVGGAVGLLLEETNGRDAKDTLNEF 533
            PPA   +        N TQP D           WEY +   + ++  +++LVCD K L   T S+F  G L GT   G L D  GRK  +    LL     L T  +P+   ++  RF    A    +   + LL+E+V   +R  A  +    + +G + L  L AY  + W++L +    P ++ F  ++ +PES RWL T+ R  +A  ++++ A  N ++L  E      P  +      LDLFR   L   TL   C+WFV+ L YYGLSL   D G  +YL  +     E+P+   +     RFGRK + +  L+L G+ CI + +IP       + LAV  +GK     +F I  ++S ELFPT LR  G+  V +   +G   +P +   L  +   +P ++ G   +V G +  LL ET+G+  KDTL + 
Sbjct:   89 PPANASLQDILSHRFNETQPCDMG---------WEYPENR-LPSLKNEFNLVCDRKHLKDTTQSVFMAGLLVGTLMFGPLCDRIGRKATILAQLLLFTLIGLATAFVPSFELYMALRFAVATAVAGLSFSNVTLLTEWVGPSWRTQAVVLAQCNFSLGQMVLAGL-AYGFRNWRLLQITGTAPGLLLFFYFWALPESARWLLTRGRMDEAIQLIQKAASVNRRKLSPELMNQLVPEKTGPSGNALDLFRHPQLRKVTLIIFCVWFVDSLGYYGLSLQVGDFGLDVYLTQLIFGAVEVPARCSSIFMMQRFGRKWSQLGTLVLGGLMCIIIIFIPADLPVVVTMLAV--VGKMATAAAFTISYVYSAELFPTILRQTGMGLVGIFSRIGGILTPLVIL-LGEYHAALPMLIYGSLPIVAGLLCTLLPETHGQGLKDTLQDL 514
The following BLAST results are available for this feature:
BLAST of TCONS_00000879-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
S22AD8.861e-5531.14Solute carrier family 22 member 13 OS=Homo sapiens... [more]
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