XLOC_000341 (gene) - C. hemisphaerica

Overview
NameXLOC_000341
Unique NameXLOC_000341
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000002:1071636..1075800-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000341 ID=XLOC_000341|Name=XLOC_000341|organism=Clytia hemisphaerica|type=gene|length=4165bp|location=Sequence derived from alignment at sc0000002:1071636..1075800- (Clytia hemisphaerica)
AAATAAGGGAAAAAGTGAAAAACCTTTCGTGATTTTTCATTCTCTGTGAA
TGAACTCTCGTTCAAGCAGAGATAGAAGGGAGTCGGTTGCCTTTGTGTGT
TTGGAGCAAATTATTTGAGAGGAGAGAACTAAAAGATTGATACAGAACGA
AAAAGCAACCAAAGAAATAACACTGCGATACGAAAAATATTTCAGAATTT
TACAACCGTCACTTTGATTTTTAGAAATATTTTTCGCATAAACAACATAC
AATATGGTAAGTTGCTTTTCCTAATGCTTTTATGTACTTCTACCTTTAAC
ATTTTATTCTTCTTCNTTTAAACAACATACAATATGGTAAGTGTTTTTTA
ATGTACTTCTACCTTTAACATTTTATTCTTCTTCGTTTTCATTTTTTCTT
CAATATTTACTATATTTGATGATGGACTGATCCACTCGCATTATTTCTTC
CACAACCAAAAATACCGAGCTCATTCCAGATCTATCACAGTGCACAGCTT
TTTTCATTGCTTCTATAACAGACTTGAGTAGAAATTTTACTATCCAACAA
ACTCAAACCCAGTCCCTTAGTTTACTTTTTCATGATTCCTGATTGCATCA
CGTCTATCAGTAAAATCAAAAAATGGTGCAAGTGGTTTGTGATACGAGAT
AAGCTGAAATTCTTTAGCGGTACGCTTGACTTTTGAGAAAAGGCCTGGTA
GTGAATTTGCATTTTTCACAAGAGCGCTTTTCACGCTTGTGTTTTCTATA
CCATCATCAAAAGAAATTTTCCTTGTAAATTCAATAGTCTCATGAGTCTC
CTCTACATGAACCGTGCCAATAAGAGTTGATATAGGTGTATTAGCATAAT
TTTGGGAGTGAAATATCTTTCATGGCACTAAAACAAACTAACTTTCAAAT
TCAACAATTGTTATCATAGAGAGAGTGTATTTCCATCCACATTGGACAAG
CTGGTTGTCAAATTGGCAATGCATGTTGGGAATTATACTGCATGGAACAC
AATATCAAACCTGATGGTCTAATGAACGAAGAAGGGTCACAACGAGATGA
TGAATCTTTCAGTACTTTCTTCAATGAAACCGGGAATGGTAAACATGTAC
CACGTGCTCTCTTCCTTGACCTGGAACCTAATGTTATTGGTAAGCAACTT
AATCTAATACTGATTCATCGGTGTGGTTTGTGGTTTGTGTTTTTTTGTGC
CATTCGACAAAGAGTTTTACTTCACTGCCAAGCTCATTTCAGAAATCTCT
CGGAATCTTATCTAACCTCTTGGAATTTTATCGAAGAGTTTGACTTTTAG
AGGCACATCCACATGTGGTCTGAGTTTTGTTTCAAATGTCTTTGAATTGT
ATATCAATCGATCAGTTGCAAAATTTCACGTAGATTTAAAAAATGCAATA
AAAAAGTAAGAACAACTTTCTTTATCAAAACTATGACTCTTTGAAGTACT
ACCTGTATTTTGACCCCTCTTCCTCTAATACGAGTATACTCGTAGTTGGC
ACCGAAAGTGTTAAGTTACGCTCTTTCGCAGGAACTATTGTTAAAACTCA
ATGGGTAAGTACCGATTAAAAATATGGTAAACGTAGAGTAAATCCACCGC
TATGGAATTGAGACAGGTCAGGGGAGTTTTTCTGAGAGCGTTTAGATATG
CTATTTCATTGATATTTTAAGCCCGGGGGGGGGGTACTACCCTTGTCGAC
CGACGGGGGTGCTCCGCTGAGGTTCGAAAAATGGACCCTACGTGGGACTC
GAAATTTGCGAAAAAAGTNTTTGAATATTCAATTAAATAAACAACTGAAA
TAGCTGAAATAGTAACAAATCTCAGAAATATATTTATAACATGGGAATAA
ACCTAATAAAACGAACAATTATGAAAATTATGGAATTACTGTATTCTTGT
TTTTGTCCCCCCCCCACCAGGCAGAGGACTGAATATACCCCCATTTGTAT
TTCTCTCCCCATGAAGCTTGTAATTCTCACTCCCCCCTAGTACCAAAATC
TGATTTCCCCCCATCTTCCTGGGGGGATTATCCCATGTGTATATCAATCG
ATCAGTTGCAAAATTTCACGTAGATTTAAAAAATGCAATAAAAAAGTGAG
AGCAACTTTCTGTATCAAAACTATGACTCTTTGAAGTACTACCTTTATTT
TGACCCCTCTTCCTCTACTACGAGTATACTCGTAGTTGGCACCGAACGTG
TTAAGTTACGCTCTTTCGCAGGAACTATTGTTAAAACTCAATGGGTAAGT
ACCGATTAAAAATATGGTAAACGTAGAGTAAATCCACCGCTAAGGAATTG
AGACAGGTCAGGGGAGTTTTTCTGAGAGGGTTTAGATATGCTATTTCATT
GATATTTTAAGTGAATATTTTCTTCTTCTACTCAACAGATGAAATCCGAA
CAGGAGCATACAGTAAATTGTATCACCCGGAACAGTTGATCAGTGGAAGT
GAAGATGCAGCTAATAATTATGCTCGTGGTCATTACACAGTTGGAAAACA
AATGATCGATGATGTCTTGGATAAAGTCCGAAGGTTAACCGAGAACTGTA
CCGGTCTTCAAGGTTTCTTAATGTTCCATTCCTTTGGTGGAGGTACTGGA
TCTGGTTTCACATCTCTCCTCATGGAACGAATCACAGCCGACTATAGCCG
TAAATCTAAACTGGAGTTTGCAATCTATCCAGCTCCTCGAGTATCTACAG
CTGTCGTTGAGCCATATAATGCTTGCTTAACGACGCATACGACATTGGAT
AATTCAGATTGTGCTTTCATGGTTGATAACGAAGCTATCTATGATATCTG
TAGACGCAATCTTGATATTGATCGTCCATCCTATACTAACTTGAATCGGT
TGATTGGTCAAATTGTCTCCTCGATCACAGCTTCGTTGCGTTTCGATGGC
TCCTTGAATGTTGATCTGAATGAGTTTCAAACCAACTTGGTCCCATACCC
CAGAATTCATTTCCCAGTTGCCACCATAGCTCCAGTTCTGTCAGCTGCGA
AAGCGTACCATGAGAAAATCTCCGTATCGGAAATAACACATCAATGCTTC
GAGCCTGCAAACCAAATGGTGAAGTGTGATCCAAGGCTAGGTAAATACAT
GGCTGTGTGCTTGTTATACCGTGGTGATGTTGTCCCTAAAGATGTTAATA
CGGCAATTGCTCATTTAAAAACGAAAAAGAATATCCAATTCGTTGATTGG
TGTCCAACTGGATTCAAAGTTGGAATCAATTACCAACCACCAACGACAGT
GCCTGGTGGTGATCTCGCTAAAGTTCCTCGGTCTGTCTGCATGTTATCTA
ACACAACTGCTGTTGCTGAGGCCTGGGCTCGATTGGATCATAAGTTCGAT
TTGATGTATGCTAAACGTGCTTTTATACATTGGTATGTCGGTGAAGGGAT
GGAGGAAGGTGAATTTGCTGAAGCCAGGGAGAATATGGCATCTTTGGAGA
GAGATTATGAAGAAGTTGCTTCAGATTCAGTGGCTGATGATTATGATGAA
GATGAGGAGGGAGAAGGAAGCGGTGAAGAATACTGAAGATCGTGTATTTC
TCCCATTGCATTCACAGCTAAGTCTTTAAGATATCTTTAGAATTTTATGA
ATTTTTGATTGAAAGCAAATTTAGAATGTATGATACTTAGAGATTGTTGA
TTTAAAAATAAATTTGAAAATAATTTACACACCCCAACCTAAGCTACTAT
CCCGGATAAAATTGCATTTTTGATAACAACAAGGGAGATATCCGTGGTGG
TTTGTGGGTTCCTCTAAAATTAGGAGAGTTTTATTAAATCTTTCACTTTT
TGAGCGTTTGTCCCGGGGTAATGGAGCCTGTTAAATATCTTCAGGACCAC
TTGGACCAGTGGCACGTGACCGTACCCAATTTTGCCTTTTCTCTGTTTTG
AACTATCACAGCAAATCAAAAAATGTCTGGAATAATTTCATTGAATTTAC
TTCTTGCTAAGGTTAACTGTAATATTTTTTTGCATTTGTGTACATAGATT
ATGGCGATTATCATAAAATTTTATGTTAATTTTAGAAATAGGGAAAATCA
AAATTATCTAAATGCCGAAACACCTCTCTTGGTAAGTTCCTTAAAAGTTC
AAAAATCAATGGTCGTAATGTCTCTACTCTCTACTAAAGTTCTACTTCCA
AGCAATATAAGGGGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00000578TCONS_00000578Clytia hemisphaericatranscript
TCONS_00000577TCONS_00000577Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00000577-proteinTCONS_00000577-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000002supercontigsc0000002:1071636..1075800 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
26.62	24.18	29.99	29.24	16.18	11.49	88.46	90.39	52.02	57.64	45.88	33.12	22.96	19.1	11.68	10.33	23.48	27.52	29.57	31.34	24.49	27.25	17.72	16.7	9.93	9	23.97	25.21	13.54	13.18