XLOC_000306 (gene) - C. hemisphaerica

Overview
NameXLOC_000306
Unique NameXLOC_000306
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000002:1524677..1533239+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000306 ID=XLOC_000306|Name=XLOC_000306|organism=Clytia hemisphaerica|type=gene|length=8563bp|location=Sequence derived from alignment at sc0000002:1524677..1533239+ (Clytia hemisphaerica)
TTTAGATTGGATACCAATATagatttaaaaagttatttctAGATATCGAA ATGTGAAGAAACAACATTAAGAGTATGGATTTGCCGGACACTCACAACCT GACTTCAATTATCGGACAAATAGATACTTGGGACGAAGAGGGGCATTTGA CGCAACTTTTATTATCGATTTTATCCATTGGAGTGACTATTAGTCCAGAA TGTTGGTTGAAATTCCCTATCATGGTACGAAAGTATTTGATAGATTACAA AAAAGATCGTATATTGTACAAGGAAATAgactgaaattttgaaatgccca aaactttcttttgaagATCAATTGTCCTTGTCGAATTTTTGAATGTCGAG TTTGTTcttgatttgttcttttttttggaaGTGCTTTTACAAAATGGATA AGAAATCACGAAggcattttttagaaaaacgttaacaaattttgaagcct tcgggtgATCTTAGTTTTTTtaggttttaagcctaaaattgttcttaaaa ttgtTCTCAGAAATTACACATTCTAAAGCATGTAAAGCCTTAAACCTTCT AAGAGCGTCATTAACATTGCCCTCGAAGCTCGAAACCTTGTGTTTTTATA AACCTTCTTTTAATAGAAAAATATCATgtatgtttttttcattttcagtg taTAGGCTGCAATTGGCACCAAATCACAGCATCGCTTCGACAAACTGAAT ACCACGAAGTTGTCACCACTATATGTACACTCTGCAATCTTATCAATGGG TGAGCTTTTTGAATAGTCTTTTAACTCGAAGATACATCTTTCTCATTTAT CCATTTATCCATTTATCCAGTTCTGATTTGCTCAGGTTAACCCTTATTTT TTCATCTGTTTATGACAACCCTGTCTCATTCGCTAGACATACCCTTCTCC CTTCTCCCTTCTCCCTTCTCCCTTCTCCCTTCTCCCTTCTCTAAGACGCC TCTTTCCACTTGTTCAAGGTACCAATTAAGTTTTAATATCCTGATGCTCG ACACTATAATACTATAATATTACCCCTCCCCCCCCAATATCTCCAAAGGT TTACCATCTACTTTGGTCGTTGAGCTCCGGCACTTAACCCTCAACTGAAA AGAAACTGAATTTATagataaatagaaaaaaatcaacctggTTCTaaata attccaaaaaatatatggaaATGTAGAAGATAAACGatgaaaaaagaatt aattaaTTTATCCTTTGATTGTTAATATCTATTTTTTGGTAATGAGGAAC TTTGACAcccgggaggggggggggtactacaaTTGCTGACCGACATGAAT GCTCTGCGAAAGGTTCGAAAAATAGAcactacgtgggactcgttttttca aaaattttgccaaaatttgtgaaaaaagttaccctgaatgggactgaaat tgcaaaatgttctcgaattttctactttttccccaaattttccaaaaaag gcaccctacgagagacttatttttctattttggtgtttttgcgaccctac ctgcgACTTgtagaggttaaaaaaggtaccctgaccagcggtgCATCCCC GTAATCAATCTTGCTCTAGTACCCCCCGCCCCGCTTTGACAATCAAGAAT TTGTGTATGCCTAAAATGAATAAGGAATTTAACATCAAACTCGATGACAA TTCTCACCTTTCATAAAGCAATTccaaattttatgaatttctttatagtt ttctGATATTTATACTGCCAAAAATTCTAGCAAGTTAAAAATTATCCGGT CAAATGACGCATTATTCAAACAAAagttacaaaatgaaaattacccCAAT GGGAAATCGTGTCATCTAAAAGCAATATTGTTTATATGATGATGACTTCA ACATATTATTaataatatgtttttttttgttttgttaaaacAAGTTACAT GTTTGATTAATTATTTGTTATGAATCGTATGAAATTGTATAATTAATGAA GTCATTAGATTAATAAGTAAGCATCAGGTCTATCGATTACTGTATTTTCA ATATCAAAATCAACTTTATCCTAGGTTTGGGGGACTGCCTTTTAAAGGCC TttccagcggtttgcgtgaatgcgtgaattggctttttcacttgcgtcaT GAAGGTAAATGCGTGAATTAGGGAGGAAAATTAGGGAGGAAGTCTCCCCA GTCATTTCACTTCCGCTGGGACTTAATAAGGTTACTTTTTATCTCTTTGA TTTATACAGATTCATACCAGAGAACATAGAATTCGAAAGAAAAGATTGGT TTGTGTTACAAAAACTTCGAAGATCTGCCCAGTATGAACCCAATTTGAGA CCAAATTTCCCGAAAATATCCGAAACGGTTAACGTTACAATACAACTGGT TACTATCGAAAATTTGGACCTGTCACACTCGGTATGTATGCGGATTCTTT TAAGATGGATTTTTGGGTTTGGTTTTCAGTTTTAAAATGAAGTGACACAT TACTACATTCAAACACACAACATTCGCCTAGAATTGAAAAGATACCCAAT TTTATGTTCAAAGGTATGATTGGTAATCAAAGAATCAGGCTCAAtgatgt gccgctggtcagggtaccttttttccacgtagggtcgcaaaagcaccaaa atagaaaaataagaaattccTCGTTTTGGGGGGATTNTGGTCTCAAAagc accaaaatagaaaaataagaaattccTCGTTTTGGGGGatttggatttca aaaaaacaagTCCCTTGTGCATGTAGGGTCCATTTCTCGGACCTCAGTGG TACACCCCCGTCGATCCGGGGTCACAAGTCCTATCCCAGTCTGTAAATCT CACTTTAGGTACCttcttgattttcttcttctttagaGCTTCAAATTAGA TTTCCTATTACGTCAAGAATGGAACGACCATCGATTACGTCATCACCATC CGGCCGTCTTGGATGGATCCAACCTTCGAATGGGGGTTTGGGTACCAGAT TCGTATTTTGTTCAAGCAAAGCGTGGTGTGTTCAGCCGGGTTGCACATGA TGGGCAGACAATTAAAGTCAAAAGTAATGGAGATGTATCACACGGTGCAA GGTAGTTTGTTTGTCTCGATTTTCCAATTCATATTATTTTCTTACGTGAA GAAGAAGGCAATTCGCCCACCCTCAACTCCAGGCCTTACCTGACCCCCTT ACACTATTGATAATTCTGATGGATGCGTTGACGGGGGATGTAAAGGACTC CTCCAATTTTACGGCACTTACCTCTTTacgtcgcagaatcgtttaatGGC CCTGACTCACGAGGGTGGCAATTCGTCAAGTCAAAAAAAGAGGATGTTTG CGTTGAATTTCAACTTGAATTTCAAGTTTACGGATCTAACCTATACTGAC TGTATAGATGAGATTTGATATTCTTTCTAAAAGGGTtaccattaaaaaaa atttgtagcTCAAGAGTTAGTTTTTACTAAATTTCTTTCATAGAAACTTT GATGTTGACTCAGagtcagaaaaaatcatttctcgGTTATCAAAAGATTT AGTTTCCTCATCGTCGATAACGTCAAAATTCAATCAAGCTTGGCGATCGA AGTGATTATACTTATGATTGTAATCTTGcatgaaatattctttcagaATT ACATTGGAGGTGAGCTGTCCCATCGACTTACGAAACTTTCCAATGGATAT CCAACATTGCAATCTCGACATGGAAAGCTGTAAGTAACAAGAAGAACCTT TCAAAAATCGTCGATGGTTTCAACAATCGAAAAAAAAGCACTCGatattg gcacttaaagggacattacagtacttgcgaaatttgtaaacaaactgtat gcagcagatacaaaatcaaaacaaatgtcacatgtcaaaataaaaaatca aaccaaatacNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNtttacaagtttgttttggacacgtgattttaattgttctct ttaatgacacgtggtttgcgcaatgtttacattttactacttttatgtcc ctttaaagggTTGACCGTCCCCGATTTTGCAGCTGAAAACtacgggttat tccaaatcgcttcagtcactcactgtcctcaaaagtgcaaatacataaac tcgcttatCTCCAAGCGTTTAGCGTAAATGAAAAAGGGGGATAGACTTTG CTCACTAACGGCACTCTTCTTCAGAAAGTCACGTAGTCTAGCATGCTATG TGAAATAATCCAAACATAgtgaaaaataagcaaaaaatagatcttatttt tctaaaaaacgatacattgtgggattgtttcgggggtattacaatagaaa tctcttaggaattcctcgagagaattctattgtaacacccaatgaagtat aagcccgaagggctagaagtcaatctccttggtaggatttgaagccaaca aatcctaccaaagttgcgcggccttgagcggctcNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNtatcaatcgtaaacaaaagaattgctagattcaatctgtcgtcaa aaatacagcgcattttttaaggcttcactttttcttgcctgagaaaggtt agagattgaactctagcccttcgggctttaaactcaatggtaacaccccc gaaacaatcccacaatgcatcgcttttttagaaaaatcaaaagctcTGAT TAGGTCTATTATGGAAGAGACAAAATTGTAATTTATGCAAACTGACATTA TCCCGTATTATCCCGTATTATCATATATAACACCCATATCACTGTATATT ATGTATTATAAACGAAACCATATCCTTCTTTACATTTCAGACGCATACAG CACAGAAGAAATAACATATAATTGGTCACCTCACGAAGTCATCATGAAGA ATATCaaagaaacatcaaaatcactttCACAATACACGCTGGAACCAATC AAAACCGGCAAAGGATCTTCGGAATATGTGCTCGGTAAAGCGACTACATC ATTTTTGACATCCCTGATTAGTCACACAGCGTTTTTATAGACGTTATTTA GGCCTTAGGCACGTAAAGTGAACGAGTTTTCCGCCTTATTTGTCTTTGTC ATGAATCATAGAAAATTTTATACGATAATTCTTAAATGAACATATTTTGT GTAAAATTATTTGCTGAcgttttaaacaaaagaacaacCCTCTCCGAGAT CTTCttcaaattaatgaaaaattcgaataacgGAGGGGATTTGTAAGATG AAAGGACCAATGATtatgttcgaattacagaaaactCGAATAAGAGgaaa tttgatattattttgcTTAAGACAGCATAAGAAGCGCTTCATTTCTATGt cataaaaaataatatcttCAATAGGGCCAAACAGGAAACTAAGATTCGCA CAAAATAcactaaaattgacattctatGATTTGGTCTAAGTTAAAATAta gggaattttattttcaggtaaTTGGTCCAAACTACAAATTGAATTCAAGT TTGTTCGGAACAGTATCATATTTATACCAGCAATGTATTTCCCATGTGCC ATGGTCGTCTTCATTACTTGGATCACATTCTTAATGGACTCGGCCCAGTA CCCTGCCCGTACTTACTTATGTGTGACGTCACTGTTGACTATCGTTACCC TACAGACGGCAATGAATGCTTCGTTACCTAAGGTAGAATcttaattcttg atattcatgatgtattGTCGGAGACACCACGAACATATATAAACGACTGA ACGTCTATCTTCTTTTGTGTCTTTGAagcaataaaaaacaaaaacggaat aaaaaatccgacttaattccgtcataattttatttatttggattacTTCt ctaaaaggattgatagagcttgaacattactagCAATTCACAAAAAATTT GTCCTCCTATTCTTTTATAAATTTGCTatattttaaaagcatttttcaac GCTAAagtgcagaatttcaactgcgtgtatacttttgaatctctTTTATC GCTGGAATAAATTGTTCTATGGCTTAAAAAAAATGGCATGTTAAAGTTCA GAGCCTGTGCTATAAGAATATCCTTATGTGAATCccatactctctaaaat tattccatactttcaaaatattaccCGGAGTTTTAACAAGTTGACGGAGT ATTTTGCCTCTCTTACCTTCCTCATAATGTAAATTAAAGAGTTGTAAAGA GTTGGACCATTGAGgtttttgtcgaagttttgacgtagTTAGCAAAGTAT TCATCtgaggtatatcatcaaaatttattgtttcatttcatgattttaac gaggcggcaacgaagctagcagtgttatcttcaaaaatacaaaggagatg gatgttcAGTCGTTTATTCTTGGGCACGgaaagtcacgtgactttgaGAA ATCGTACCGCTGTgaaagtctaccattttgaattggTTGTTAACAAACGC GAGCAAAAGCTGCAGTAATCTAGTAATCTAATTTACTTTCAACTTTAGAA CACGTTTGATCACCATTAGAAGCCATCTTTTTACTGTTTAACATGAGAAT GCTGTGATTTGTTTTCAACCAATTCAAGATGGTAGACTTTTTTAGCGGGA ATTACATAATCTTGTGATTATGTTCATGGAGACACTCAAAAAACACCGGG CAACTACCTTAATTTTTATTGCTCTAAATTtaaaactggtggcaaacgcc cagtatttttcaggttttccgtatgaattttttacaaaaggCGTGTTTGT ACGTTTTTCTAGGTCAGCTACGTTAAAGCAATCGATAAATACATTGTTGG TTGCATTTTGTTTGTGGCTGGTGCATTCTTGGAGTATGCGGTAGTTCTGC TAATCAATATCAAGAAGAATAGTGTTCTGATGGAAAATTCGTCCCTGGTG AGCAATAACCATGACAATGTATGATTTTGCtaattttccttgtttttcaa CTTTGGCAATCgcattacttttttcttttatctgcTTATTTActctttca agttttttttttgtctcgTGTTAGCCCATGAGCTAGACACTTTTTGGGGC TCACTCGACGGAGGAAGCCTCACTATGATTTTCGGAAGCCTTAACTacta tattttaagaaaaatcagggTGCTTTTTTCAAACTCACAGCTTTTGAccg aaattttcaacttttttaaggGGTGGTAAAcgcgaaatttttatttttgc ttggaTTCCCTTAGGAAATGAAATTACCATGTCATCTTTAAAATAGTATT GCAGTATTTGCAGTTCTCAGCGAAGAAGGCGTTATCTGTAACAAATACAG ATACAGGAAACTTCTTAGATTTCTGAAGCTCTATGACTGGATGGTGGTTC AGCATTGCTGAAATCCTAAGATCCTTCAACTTcctcgattttttttttct tcttctagaTTTTCAATAACTTTTCGTACGCTCTTCAACCCAGAAGTGAA AAGTCTAAATCCTCTCTAAAGAAGAAATTACGACGTCGCAAAATCACTTT CTTACGATCCCGATTAACGAGCCCAAAGGAGTTCCACGACGATCAGACGT CATCGGTGAATGACCAACAAATTGTATTAACAAAATTCGGAGCTATTTTT CATTTCTATCTGAGCGATGCGTGGCCCAAGAAGCTGGATGTTATTTCAAG AGTTTTCTTCCCGTCCCTGTTTTTAACTTTCAATTTGTTTTACTGGATAA CTCATGTTGACGATCAGTATTGAGTCACACCAAAGCTGTATAGACGTGCT ATATTGATttcatctgttttttttttcttttgcatgAAGACTGTTCGTTA CCTTCTTGTAAACTGGAATCTGGTTTTTAATACAGTTGACCCTATTGTTT TTTCGAGCTCGAATGGCATGTCCAATTGTTTAAATTGCAGAAAGATTAAT ATTAGCGTGAGTCTAACGTCCGATTGGACGTGCAAAAAATTACATTGACA TGGTGATTACAGAACGGTTTCCTccgataaattttgaaaattgcattttt taagGAAGTGGGACCATAatgaaagaataacaaaatttgattggatgTGT TTTCAACTGTCGTTTGGAGCTGAGAACACGTTCTTCATTTCGCCACCagt ataaaaaagaaataatcaTATAGGATGGGTCTCCAGGGGTTTCCAGGCTA TGCCCGATTGGaagaaagaaatatttaaacTATAGTGTTTGCATTcctta aaacaatgaaatgttATTGGTTCGAAAATACATCACGTGACCTTTCCATT TTACTCTTCGTAAgctcaaaatcgaaatttcaagaatgaggattacacgt tttttttataagaacattcaaaatttttgatgccttctgatgttcttaac tttttgggaatca
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00000487TCONS_00000487Clytia hemisphaericatranscript
TCONS_00000488TCONS_00000488Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00000488-proteinTCONS_00000488-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000002supercontigsc0000002:1524677..1533239 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.02 0.34 0.08 0.08 15.95 13.75 28.64 31.9 33.77 33.94 33.72 26.05 4.38 4.87 0.34 0.21 1.87 2.75 1.24 2.4 3.42 3.39 0.48 0.69 11.51 12.05 0.07 0.1 0.15 0.04