XLOC_043491 (gene) - C. hemisphaerica

Overview
NameXLOC_043491
Unique NameXLOC_043491
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_51:126268..131690-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043491 ID=XLOC_043491|Name=XLOC_043491|organism=Clytia hemisphaerica|type=gene|length=5423bp|location=Sequence derived from alignment at scaffold_51:126268..131690- (Clytia hemisphaerica)
CCTGCATGCAACTGAGAGCTGATTGTTTGAATGGATATTAAAGTGAATTA AAATGAAGATTTCAAACCTTTGTAAGGATGTTATTAAATTGATTGTGAAC AAGGGCGACGTTTTACGCTCAAAATAGTTTGTAGATTTGGACCAATATGT TTGTGAGCTAAATCAACAAGTTAATAATTATCAAGATGAGGCAAATCACA AACAAAAGGATTTGGCATTATTGCCAAACATTCTATTTTTTGACCCTTTT GAGCAACTCAAAGACTCTGAATTTTTTTACTTCATATTGCAAAGAAGATA CTGGGAAAAATGTACCATTAGACCCATCACTAGGAACAGAATGGGAATAT GGTGAATCATCAGGCAAAGAACCTAGATTGACTTGGGACATATTTTGGTA TTGTGCTCTAGTTGGTAAGGTAACCAAGTGTTGTAGTGGGCATTCAATTA CATCGTATCACCCTGGAATTTTGCAACAAATTTCAAACTACCCATTCTTA CTTTCTCACAAGCGTGGAATGACTAAGTCAACATTTGACCTGATAATCCG TTTAGTTGAACAAGGCAACAATTTTAGCAGCATTGAAAGTATATTTCTTA GCAGTATCGTCGATATCGTCCATCGAAAACTAGCTCTAATCAACAACACC AACATGCAGACATCTATTGAATTCATTGAACAACTGAAGCTGTTTACTCC ATCACATGATTTTATCACTTCTTGTTTTGTTTTCAATTTTGATAACTACA AAGATGTTTATCTTTCTGAAATGGATAAACTCACCTTCATTTGGCTTTCA GGAGACCACACGTTTCGTGTGGCTGCGAATATAGGTAAGTAGCAAAAGTT ACAAAGAAAGGGGTAGCATTTTCACATTGGGGGATGCCAAGAAGGGGGGT ACGGAAAAGTGGTTTGTCGGTTTCAGCCTTATTTTTGTCGGTTATCGGTG AACGGAAAACATTACGGTGTCGGTGATTGAGCTTTTTTGATCGGTTAATC GGTGAGTGGATCGATATTCAAGCGGTTTTCGGTGACAAGTTAAGTATAAT GGTTTTGGAGAAATAAATTATCCCAAGAATCAAAAAGTAAATTAACTACT ACATGTAATTTTTCTTTGCTCGCTTCGCTTGCATAAAATACTGTATCAGT GACCAATTGAGTCTTTCAGATTTCAAGAGTGCATAAATGACCTTTGTTAC AGGAAAACTTGGAATAATTCTGCTAGATTTAGTAGCAGTATTGGGGAACT GCCAGCGGCGGCTGATTTTTCTATGGAGGGGGACAAGGGGCACCAAAAGG CGCCTCTGACATAGGGTCCACCCCCCAGAGATTTGGGGGTACCTAAAAAA AAAAATTCTAAACTTTAAGGGGTACCTGGAAGTATTCCCAAATTTAGGGG GTATCTGATATATTTGGGGGTACCTGTAATCTCGTAAGTGGGGGCGGGGG CTGTTCTTTCTGTATGAAGTATTTTCCTTGACTCAACCAATTTTCCAATT TTCAATCAAACTTTTCATTGAGAAGACTTTATAACTTATGTCTTTCCCTT TTCATCCAGTTTTCTTCTCTTACATTGACAAATGAGCAGAAAATCCTTTA TATTGCATTTAACAATAAAAAAGGGGGTAACTCAAAGTTGGGGGGCTAAG TTTAGAATTCTAAAAATTTTGGGGGTACCAAAATGATTGGGGGTACCTGA ACCCTGGAGGACCCTATGTCTGATTGCTAATTTTGGCGCCCCTTTGCTGT TATAAACCCTAAAATTAGCAGTTTTCAGCCAAAAAGAGGAAAAATATCCA AAAATTTCGCTGATTTCCGCTGATTTCGCTTGCGTAAGCTTTCCAAATAT CTTTTTCTTAACTCTTTAAAATTACTTCCTTACTTTGCCCAAATATTGGT TGATCAACCACGCTACTGTTTAGCAGCCCCAAAAAGATGCTCTTTCTAGG CACCAAATCTTAGAGATCTCAATCAATCAATATTAGGCTATGCTCATCCT CTAAGGAAAAGGTTTCTTATATGATCCCTATATGATGCAGAATAGACGTC TGCGAAAAAGAATAATACAATCAAAATAAGTCTGTTAATGTTTTTTCAAC ATTCTCGACTGGACCCAACTTTTCTTTACCTTTGAATTGTAGAGTCAATT TAGTGAATGCTTTGGGCAGAAAACCGTTGACTCGTTAATCGTTAATCAGG GACTGCGCCTTGTGAAGAAAACAAGAATTTTTTAAATTAAAGACCAAGGG CATCATTTTGGGGCAAATTGAGTCTGAAACAGGGCTATTTTGAGCACATT AGGGAGTCAAAATCCAAAATTTCCTCCTCCTTAGTTTGGCCACTTTACTA TCAAAATCAAGGGAAGGGCCCTGTTGATCTGATTCATTAGATGATAGATC TTTTTAAGCCACGGTCTTAAGGAATTTTTAAAACTGAAAAGTTTCATGTC AGCGCAAACTCTGTTTGCGCCTTTCCTTACCAATACTAGATATTTGACAA CTATTTGCCATCATACGCATCATATATCATAACTTAATTATTAGCAGCTC AAGACTTCATAGCCATGTATACAATGATGCTAGTATTTGAAGGGAAACTG AACGGCTGAACGGCCCGCTGAACACCACGGATGCCAAACTTATGGTTTTC AACTCAAAAAATTATTTTAGGCAAAGTGGCTTTGGATGGGGTCCATATCA ACTCCAATATCAATGATTAAAAAAGGCTTCTGGAGCAAGAAGGAAAAATC GGTGTCGGTGAAAAGGATAAATTCTGTCGGTTTATCGGTGAGAGTAGAGC AATTTTTGAGCGGTTTATCGGTTTTCGAAAGTCCTGTACGCCCCCCTTAC AAGAAGAGGGTCCTGAGGGGGGGGGGTTTCCGGACCCCCAGGAAACTATG TTTTCCTAAGAAATCTCACCACAGCAAATGTGCTGCCAAAATTTTGTATA TAATCCAAGATGGCGGACAAAAAGCGAAAAGGTCCATGTAATATGATATT TTTATATATCTTTTTCTAAATTCCCTTTACAGGCATGTACAAAGACAGAA GGTGGATCAAACTGTTTGACTCTTTATTTTGTGTTCTCAATGAAAAAGGT CAGGTAATGGGTTTCAGACTGGTTAAAGGAACTAAATTTGACCTTGTTTA TGACATTTTCAAACAACTGGCTGAGAAAGGAACCACGCCACACTTTATTA TCATTGACAACTGTTGTTTATGGGTAAACAAATTGAATGAATTATTCCCT GGTGTTGCTGTTAAACTAGATCTGTTTCATGCCATAGCGAGATTAACCGG ACAGGTTTAAAAAAAACACCCATTGTTTTTTGACTTTGTAAAAGAACTGG GACTAATATTCCGAGAAATTTCAGATTTTGGAGAGGTAAGGAAATTGCCT ACTCCAAAGCCAAATGTGATTTTAGAAAATCTTGAAAGGTTCATCTTGAA ATGGTCAGATGTCAGTTTCAAAGGTTGGTTTATTCTGACTCCATCCTTTA GTATGGAAATTGAAAAGCTTAAGAAACATATTAACTTAGGGTGTTGCTCT GATATTCCACCTGGTGGTGGCACAAACAAAAATGAAAATCTACATAAACA GCTGAAAAGCTTAGTTTGTAGAGGAAAAATGAAAACTGAGACGGCAACTG CAATTTTCTCTCATTTGTTTTACATCCACAATTCTAAGAAGAATGGGGAA AAGTATGTACACCCTATATTCTCTAAGGGTGAACCAAGAACGTTGCCGGG AAGTGCATCCACGTTGGTCATCAATAAAGATAACAAAGGAAATAATGTAG CCGTTCTTGCTGAAGACATATTGGAGGTGGATTCAGATCGAAAAGATAAT GCACAAGAACAAATTAGTAAGTATTGTAAGAATGAATTAATTGTCTGTGT GTCTGTCTGTCTGTCTGTTTGTCTGTCTGTGTGCATGTCCCAAAACTTTG GGGCAGCCTGGAGACCTCAAAAATGGTCGGATTTGGCTGAAATTTTGCAC ACTTGTTCCTTGGGTGAATATCTGGGGGTGTTTTTTTCATTTTTCAAAAT TTTGATTATTAGAGCCTGGGATAAGTTTTTCACAGCTGCTACAATTGGGC CTCTGAATAGTTGGAAAAATACTGAAGTTGAGCCCAGTGCGTTGCGCACG TTCGACTATTTGAAGGGGGCATTCAAAAAAGTATGTTTGTCAGTTTTAGA CCCCCTGCCCTCTTTATTTGCAGACTTTGATTTCAAACTACCCCTACATT TGTTTTTTATCTCAAATTTATCCCCCCCCCCTTTGCCCAAAAAGGTTTTT ACACTTTTTAATATTAAAATGTTTTCCAGTCTTCAAGTGGATAAAGCTAC TTTGAATAAAGTGAATTGCAAAAACTGGGTAAAACGTCTATTTTCATCTG CATCACTTTCGATGTTCTATTGCTAAAAATAATTCAAACTTTGATTTTAT AGGTTGTGTTTCAAAGATGGTAGTGGTGTTAGGATCTGTTTTGGAAAAAA TCAATGCTATGATCCCAAAAGATCTTTCAAGTCGACTTTACCGATATCAA GGTTTCACTACACTCATCACTGAAATATGGAACCCACTTACATTTTTTCA GGCTGCGAGAAAAATGGAGTCTTTTCCAGCAATTGCTGAAGTTTTAAAGC TAATGAATCTGCACATTATTGAAACAGCAGCTGACGATTGCAATGATAGT TTTCTTTTTACCATCTTCAAAGCATTGAAAGGTCACAACCTTAAATGTGA AATGGATATTGAATTGAAACCTACATTTGAAGAAAGCCGGGAAGAAATTA TCCACGCTCTTTTGCATGAGGCCAACGGTGTCCGCTGTTTCTTGTATGAC AGTCTAATTGAAAGTGATGAAGGTAATTGTACAACATTTCTATCAGAAAA TAAACTGCAGTTTCTTCAATGTGTGCTTCCTCTGATTGCTGCAAATGCCT TTTCTCTCCCTATTTTGGTGTTACCTTCGTGTCATGGAATGCCCATGTTT CCCATCTTACCTGAGGAAATAAGTAATAAGTTGATATTTGTTTTTTATGA CATAACCATGTCTTCATATCATTTGCTAACCAAACATGACCCTGGAAAAT CCAGAGCCTTTTGTCGTTGTGGCACAAGAATCAAAAAGAAAGATGGCAAG TCAGAACCACGCTGTATCAATACATTTATGTGTTCTTGCAAAAAAGAAAA TGTGCCGTGCTCAAGTAAATGTACTTGTCGGAACTGCGACAATGCAAAGA CACCACTTCAAGAGGAAACGAAACAGAAAAGAAGAAAAAGGTCACAATAC TTTCTTTCAAAATCATCAGTAAATGAAATTGATCATCAATCATCAACATC ACATATTAATGGAATGCATCACTACATTCTGGAAGCCTGTTTACATTTAA TGTTGAAGGAAATGCACTGTGAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00069842TCONS_00069842Clytia hemisphaericatranscript
TCONS_00069841TCONS_00069841Clytia hemisphaericatranscript
TCONS_00069840TCONS_00069840Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00069840-proteinTCONS_00069840-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_51supercontigscaffold_51:126268..131690 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.87 1.82 1.09 0.75 3.4 3.11 3.04 2.61 0.88 2.13 2.11 1.7 1.93 1.67 1.71 2.94 1.66 2.08 1.04 0.86 1.83 1.25 1.19 1.52 1.79 2.1 0.67 0.23 0.62 0.34