XLOC_038115 (gene) - C. hemisphaerica

Overview
NameXLOC_038115
Unique NameXLOC_038115
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_345:191918..200885-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038115 ID=XLOC_038115|Name=XLOC_038115|organism=Clytia hemisphaerica|type=gene|length=8968bp|location=Sequence derived from alignment at scaffold_345:191918..200885- (Clytia hemisphaerica)
CGAACAGGGTATAGCGCATCGAGCGCGAAGAGTCATAAAGCCTGATAAAG
CGCCATATTTCTTTGGATCTCATTTGTCTGCTTGTGGACTTTTCACTGCA
AGGCCAAGCCAAAAAAAATTAATCGATTATAAGTCATGGATGGTCCTATG
TCTCCAAAGAAAGAAAAGTCTGATCCTTTATCACCTGCAGTATCAACAGA
ACCAAAAAATGTGCAAGATCTCACTGTATTTGTAAGTTTATATACATGTT
TTATTGTGTGGCGAGGAGGTTGCAACTTAACTTTTCCATTTCTATCTTCT
ATTATTCACTTTGTTTATGTTTTTCTTTATCTTCCCACAAGCTCTAGAAT
TTCTAAAGGGCTAATCAAAGCTTGCTTGAGATCTCTATGTTCAGACAGTG
TCAATCAAACAACTTCGAACAAAAATCGCAATCGAACGTAAAATCGAACG
GTTGTGGCTTCTTCACAAAGACGAAAGACAGATCTGAACTATTTCGTACT
TTCCAGTCTGTTGTTCGTAGTTTTCTGACTTTCTGGTTCTTTGTGAGTTA
TTTTCTATGTCTACTAACTCACCGTAGAGTTGTTTAATATCGACATATCT
GTAGGCTGGTCTTCGAAATAAAAAATCTAACATAAACAAATACATACCAA
AGTTATCAATCAATCACTAAATTGTTCTCTCTCTCTATCCACGTCACAGA
TTGTTAATATAATATGAGAAATGTGAACNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNATAAGAATGATACCAAGAATTTCATTCAAGGT
TTGTTTTGATTATTTTACAGATCCGGTGTCGAGATTGCAAGACGTATGTC
GAGATTAGACGACTCTACGGTACTGAATGACTTACCGACAGATCACCACC
GGTGTGATTTGAACCCACTAAATGCAAAGTTCTGATATTCTGAAACCCAT
TGTCTTATCCACTGCGCCACGGATTCATGCCAGGATAGCGCTTCTGACGG
CTATTTATATTGTACAAACTGCAGACCAGACTGTATTAAGAGAAAGTCAC
AAAAGAGTGCTTGTTTCGAGCTCTAACCCTAACCCTAAAACTGATAATAA
CCCAATTCCTAGCCAATCTGATACGTAACCACACCCAAACCACACCCATA
CCCAACCCTACCAGGTTGCTTGCAGGTCCTGACACTATTCCCGTATACCG
GATCCGAAAAATAGATACATGTCTTTCGTCTTTATGAAGAAGCTTTCACC
TAATCGAACGCGATCGAATAATTGCGATTCGATTGTCAAACGTAATCAAA
TCTCAATCAAACTGTTTGAGTAAGGTTAGATTGATAGTTGACTATGTTCA
ATTCTGGTTCGATTGGTTTGATTGATTGTCAATTACCATGAGATTGGCTG
GGTAACTTGCATCAGTGGAGGCTAACATGCATAGCCCTCAAATAAATGAC
CTGACTGGTCATTAAAATACAACTACGCAGCTCCGCTCGCAGCTCTACTC
TACCATTTTTGTTTTGATTTAACTTGTATTTTAATGACCAGCTAGGTCAT
TTATTTGAGGGCTATGCATGTTAGCCTCCACTGATGCAAGTTACCTAAGC
TACCGAAGTAAGTATCACCTTTTCACCTTTCCATCCGCAATCTTGAATTG
TATGCAAAAATAGAGGAAGGAAAAAGCTGTGGTTGGATTTAGTTGGAAAG
TATGCAAAACATATGCAAGTTTACACAAAGATTAAAAAGACAACAAAGCA
TCTTATAAAGAAATATTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNATTTCTTAATCCAAAAAGAAATATTTACAGA
ACAACAAAAGCCTTTTAGAAATTTGTTCTTAAAGACATAGCATATTCTGT
TTTCATGCCATTAAAAAAATTCCACAAAGGTAGAGTACACACATCAAACT
TTCAAAACACGCAAACTGAAAGCAGTAATTATGACATCACACATAATCAA
TGTTTTGATTTGATCATTTGGTGACTCTATTCCCAGGAGAATAATTTGCC
GTCAGCCGAATAAGGATTGTTTTTTTACCCTTGCTAGTGATTTTTCAGCT
TGAGTTTAATGTCTAAAAGAGATGAGGGAATATAATTATTTTTAGCTTTT
AAGACTTTTAAGAGAAGCAAATTTAATCTTTCTTCTACAATTCAAGATGG
TGGATGGAAAGGCGAAAAGGTCTATTGATTTTTCTGGTGAAAATTTCTTT
GCCACGAAAGAACGTCAACAAATTATCCCCCAACCCCCCCCCCCCCCCCC
CTAAACGTCCATTTTCCACGGCAAGTCTGAGTTTGGAAGGTTCCCCTTAC
AGCCCCTTGGATATGAAACAACCTAACCTAGGAAACACTTTGTGAAAGCT
AAAAGATTTTGTGTCTGCACCAAAAAGTGCAAAACTTCAATTTCTATCCA
TTTATTTGCATAAGACTAAAAAGCTAAAATCAAAAATATTTAACAAAAAC
TTGTCTATAAAAATAAAAAGTATATAAAAAAGGAAGTTAAGAATATTATA
CAATAATTAATAGTAATAAATAGTAAAAAAGTAGAAAATAGTAAAACATA
TTGAATAAATAGTTTATTAGTTGACTGACCCTCTGGACACGTGTTTTGAC
CCTGCTAAAGCATCAAATTGAACCATAGGGCACTAAAATTTACACCTGCA
CATTTCAATTTTATCCCACGGATATGAGCAGTTTTTCATGACTTTTCAAA
TAAATACCCCTGGACAGTAAATATATCTTCCACCATGTATATACAGTCTT
TTTCTGGGGGTGAGCTTCCTTAAATGTCTATTACCTTCATGAGACTAATT
TCGAGGAGAAATAACTGAGTGTTTTAGCAGGCAAAATTTAAGGGTTATTT
TAGGAAATGATGGAAAAACTTAATAAGATGAGTAATAACTTATTTTGGCA
AGGCAGCATTTTTGTTATTTTTGGTAAGAAATAATTTTCAAATTCACCAA
AATAGGCCAAAGGGTAATCAACATATCAAATATATATTATTTCTTTTTTA
GGTTGAAAACTTGCTGAGCACAATGGTAATTACACTTGCAAATTGATCAG
CATCTCTCTGCCATGCCTCCTTGCTACTGTTGGGAATCCATTGACTTAAA
AAAATGTCTCAATTAAAGCCTAGAATTAGTGCAATTGAATATTTGGCATG
AAATTAAGGAAATAATGCAAATTATTCCTGGTTACTTACTCAATTACTTT
TTTGCTTTTTGGCCTTTGTGTATGGCGCGCCAAAAGAGTTTTTAATACCA
ACTTTTTTTTTCGATAGCAACTTTTTTCTTGATGTCAACTTTTTTTTAGA
TATCAACTTTTTAATGTCTCTATTTACTCGCTTTCATTATTTTGCAATGT
AGAGAGAGGCTTATAATACGCATGCGCAAAAATACATTGCGCGCGTGTTT
GATCTAAAATTGTCAACAACATGCAGCTCTTGATGCTCTACGGATTCCAT
GCATGCGCTTCCGCACCATCTCCTTCGTTCTTGTATTTTATTAAGGGTCC
CTTTACACTAATGGTTCTCATCGAGGCAAAAGTTTGTATTGTACAACTTT
GGTATTATAATAAAAATGTTGGTGTTAAAAAAAAGTTGGTATTAAAAAAA
AAAGTTGGTATTAAAAAAAAAGTTGGTATCGAAAATAAAAAGTTGGTATT
GAAAAAAAAAGTTGGTGTCGAAAGAAAAATTTGGTATTGAAAAAAAAGTT
GTCATATAAACCTTTTTGGCGCGCCATATTTGTGCAGCTTCTTTTTATAC
ATTTCTTTGCTCACAAATATTTTATGGATTATTTCTATTTTGTTTCATTT
TAGCAAGATAAATTTCAAGCAATGTCGGATCAAATATTGACAAGAAATAT
CCTTTTCATCATTTTGCTTCTACTTACAACGTCGTAAAATCATGACTTCT
TCTAGAGTTTTAAAACATCTGGGGAAGAATGTCCCTGGTTATTCCCCAAA
GCACACCCTTTTTAAAATTCCCTTTTTTGATGGCATATCTTTGACCAATT
AAACACTTCCAGCAGATAAAGTATTTTTCTACTTTAAAGAAGTGGTCTGG
CAACAAACTTTTCTTCGACACCCTGTATTTGTGTTAAGATTAAGTTAGTG
TTTTTGCGGGGTCATAAATATATTTTGTCAAAATTGAAGAATGGTAGTTT
CAAAAGCTAAATAGAAGATCTAATCGGAATAGTGAATAAGAAGGAAAATA
TTGAAATATATGTTTATGTAAAACCAATCTAAAAGTCACATGTTTTCTTT
AACTGATATGTTTACTGGATGACATGGGTGGACGAATTGACGAACTGGAA
AAGAACATAGGTGATCTTATGCAACAAGCTGGCATCGAAGATGAACCTGC
TAAAAAGTAAACAAACAAAAACATTTAACTAAATGGGATGGCACCACGAA
ACTTTACATACAGTTTTTGTTGTTCATATTTTTATACCTAACTAAAAACG
GGGAATCCTTCAATCGAAATCTCAAGCTTAATTTGATGTTGCTTCTTTGT
TGATGAGCCTTTAAATTCGAAACATAGTCAAATAGACATTGTCGATGGAT
TGGGATTTTTTCTTGCCAGTTGAAACTAATAGACCTTTTCATAAATTACG
TCACGAACATCACTTGCCTCGTTTTGAAATTATTGCCAAGGTGATTACCT
CCCAGTGGATTTTATTAGAACTACTTTCTATTTATAAAGAAATCATTTGA
TGTCTCAAGGGACATAATCACCATGGTAATTGTTTGAATACGAGGCAAGT
GATGTTCGTGACGTAATTTATGAAAAGGTCTATTTTAGGTTGTTTGAATT
AATTTATTGATCCTGTTGTTATTTTTTATATAAATATTATACATAATATG
TAAGTAACTGATCGAAACATTAAATAATAGTGCCACTCTTTGACTTTTAT
AACAGACCCCATTATTTGAACTTTCCGAACCACTTTTCTGCTTTGCACAA
TTTTTCAAAAACATAAGGTTGAGTAAGTTCGAGTAATCTGCCGAATTTAT
TAACTCGAACTTTGGATTCCAATGTATGTTAAAAGTTCAAGTAATGTTCG
AGTAAGTTGGGGTTCTAGTAATTTGTTAACTCAAACTTTACTAGAATTAA
AATATAATCAAAAGGAAATTTCTTATATTTAAGTTTTTAAAGCTATCGGT
TAGCAAATTACAGAAACACTCAAAATATATTTAGCTATCTTTTCAATTGT
TAATTTGGCCAATTGTAACTATTTTCTTTAGATATGTTTTTATGATATCG
AATGAATATCTAAATCGTACTTCAAATATTCACTTTCAGCTTAACTTTCC
TATATATTTTAAATCTATTTCGTGCGTAATGATTGATAAAATGTAAGGAT
TTAAAGACATTTAACTTAAAAAGTTTTGAAAACAAAAATTTCGGCAGTTT
CAGGGAATTTCGTAGTCTACACAATAGACAGATCCAGGCTTTTAGGCCTT
ACTTACGAAGAGTAGGAGTTTTACGCTTGAAACGAAGGAAGATATGACGT
AGCCTAGTAATTTCGATGATTGATAAAATTATCACAAGAATAGAACAATT
AATGAATCTACAGTTTGAATGTAAATTTTCGTACAGGTACCATTTTATTA
CAAAGCATATTTTCTAAATACCGTTGCTATGATACTTAGACTAGAATCGA
CTGGTCGAATGGGGTTGATTTTCAGTTAACCTTCAGATCAACACAATAAA
TCTATATTCAACTTCATGAAGAAAATTTTTGCATTTTTAGGTTGTTGTTT
TTATCCGAGGTTACTAGCTCTTATTTGATTATTTTTGGATAAAAAGATTG
TCCATAAAATGGCAAAGTGCTTCTTCAGTGTTTTTATTGCAATTATTTTG
CTCGTTCAAGTTTTCCATCAAGCTGAGTCCAAAGGTAAGAATTTCGACAT
TTTATTTTGTTTACCTTTTAAGGAAGCTAATTTTGGCGAACTGCAACCTT
TTAATTTTTATTTGCAAGGATTAATTTTGGTGATAGTCTAGTGGGCGAAA
TAACCTTTTTTGCTTCAACCGCCTTTACAAGTAGTATAATGTGGGCTTCC
ATTGGGCTTGAAATATTGCTGACTTTCCAGCGTTTTCGGCCCTTTTCTGC
TAAGCCAGCAAAATTTCAGATTCAAATCTCTAAAGATCTAGCCGTGGAAA
CCCTAAAACCTATACCTCTATTCGATAGTACTATCTTCGAAACAAATCTG
TTGAAAGTAATTTTTCGTCAAAAATCTTCTCAAAAACGCTGTCGTCCGCG
TAAAATTTGCATTTTTGAGAACGTATCGTCCATTTCTCGTGTCATAATTT
TTGCACTGAAAATATCTTCGTTTTTTTTTCAAAAGATTTTATCTTTTATA
TTATTCTACTTCAAAATATCTTCCCAATTGTTTAAACTCTTACTATTATA
AATGTGAGTTGAGAAATTGTTTAAAAAGTAAAGCACAAATGTGAGCACAT
TGATTGCATTAAATTCGCCAAAAAGCTTAAAATTAAGAAATTCTCAAAAA
AAAGTGTTTATATTAGATTAGATAGCATTTGCTGACTAAATCTTGAAGAG
CTTGTCCAAAGTTGTATCGATTGAGATNGCTCACATTGCATTAAATTCGC
CAAAAAGCTTAAAATTAAGAAATTCTCAAAAAAAAGTGTTTATATTAGAT
TAGATAGCATTTGCTGACTAAATCTTGAAGAGCTTGTCCAAAGTTGTATC
GATTGAGATGAAAACTGGATTTAATTTATTTTATCTAGAAATGGAAATTT
TGGAAAAGTTTATGAAAGACATGGAAAACAAAATTACGAAAGAAAAAGTT
CAAATGGAAAAAGCTGCTGTTCCAATGACTTTGAAAATGGTAAATATGTT
AATTCGACTCCATTCCCCGTGTTATTCTTCTTCTCAGTTGCATCTTTGAA
TCTTAAAGATATCTTTCGTTACGGTATATTTTGTACACTTTTTTCGTTTA
TAAGACCTAAGAGGCTAAAATCCAGAAAAAATAAAAACAGTTTAACAATG
CTGAGCCTGAAATTACTCAATTTCAAGCAATTTTGGGTTCAAAGTAGTAA
AAACTGGGTATGATAAGCCTAAAATACCTCAATTTCATCCTATACTCCCA
GGCACTTCACAAACAAAGAGTTTGGAATAATATAAGCGGGATGGGTGTAA
AAAATCTCAAAACTTAATAAGTGGGAAGGGGGTTGGAATGAAAATGTCCT
GGATGGAAATCTTTTGAAAGGGGCTAATACAGCAGAATTAGGGCAAAAGA
TGGAACCTTCAAAAACATTTTCCCAAAAATCGCCAAAAATCAATAAGCGG
GGGTGGGGGGGGGGGGGGGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGAAT
AAAAATGTCCCGGGTGGAAAATTTTCGAAAAAATAATTAGCGGGGGCGAG
AGTAAATAAGAACAATTTGAGGCTCAAAGTGCCAAAAAAATAAGGGAACA
GCCGAGCCTCAGCAAAATTTTACTGGTTCATAAAAAAAGTGTAAGTATTA
GAAATCTGAATCCTGCTGAAGATTTCTACAAATATGGCTTTGTAAGGCGA
GACCAATTTGATTTGTTGTTCTACAGACAGATCGTTAGGAAAATATGGGT
CGGTCGGTCGGTAAAATAAGAATAAATTTTTCATTTATCAGGGTTGATAA
GGTACCGAGAAAATTTTCCAAAAAGTATCTGCAATCATGGTTGTAATATT
TGAGAAAAAAGGGAAATCCACCGGGAAGTTTTGAAACCACAGTCGATTTG
TAAGTGCTCTAGAGTAGGTTGGAAGGGTAGAGTTTTAACATGACACTTAA
GATCTGAGGATCCAAATGTTCAAAAATAGTCCAATAAGGCTCATAATATA
GCCTGGATGTCTATAAACCCGAGCCAAATTGAAACATCCGATTAAATTTG
AGAGATGGCCCAAAATCGACTTTCTCGCCCGAACTTCAAATTTCGAAAAC
GAGGAAATAAGCTTAATTCTCAATAGATTTCGACCATGGTTGTGGATCAA
AAATTCACTTTGTTTTTTATCTTCGATGAAGATCATAACAAAATTTTAGT
GTATGGAATGCTTTTTATGATTTTTCAATTTCTTGAATTAATTTTCAGGT
TTATTTAAGTTTAATTCTTACAAATAACTAGTGTGTAAAATATATTGTAG
TGGAAATTCGATATTATTATTTTTTGATTTTAGCAAAAATAGGGTCCGGG
CCCGTAGAACAACAAATTAAATTGGTTTCGCCTAATCCATAATTGAAAAA
TCGACAATCCATGAAAAATCATGCTTTTGCCGCAGACTAAAAATAATTAT
GTATCTTCTTTCTTCTTTCAGTGTCTTCAAAATTATAAAGTGTGTATCGA
ATCTCGAGGTGTGAACAAATGCAGTATTGATTTTAATGATTGCTGCGAAA
AGATCAAGAACTGATTGGTACATCCTGCCAATAAAGAATATCATATTAAT
TGAAGAAAACTTCTTACTTGTAAACAAAATGTTGGCATTTTATTTCAAAG
AACTTCCTTTCCAAAAAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00060603TCONS_00060603Clytia hemisphaericatranscript
TCONS_00060602TCONS_00060602Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00060602-proteinTCONS_00060602-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_345supercontigscaffold_345:191918..200885 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
131.93	137.26	159.31	159.01	167.25	117.52	110.01	115.04	79.9	63.78	68.83	70.02	51.84	42.14	37.22	39.34	67.47	78.23	89.4	77.94	130.92	130.69	90.05	95.09	74.75	92.95	68.02	56.85	48.51	41.07