XLOC_030163 (gene) - C. hemisphaerica

Overview
NameXLOC_030163
Unique NameXLOC_030163
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_126:140024..145908-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_030163 ID=XLOC_030163|Name=XLOC_030163|organism=Clytia hemisphaerica|type=gene|length=5885bp|location=Sequence derived from alignment at scaffold_126:140024..145908- (Clytia hemisphaerica)
CCAAGTTAATGGTCTATTTACACGACACGATAGATGTGTATAAATAGCCA GGATAATTCTTACATTTCCATCGTTCAAGTTTATTTGGATTTATCAATCA CCATTTGAAAAGACTTCAGGTAATTATTAATTTTATGCCATAAAGCTTAT ATTTCCTAGACTATAATGGTTCTAGATCAAGCTGAATTTATGCAAAATCT TCAATAATGTTTACATAGGCAATATTTTTCACACATCAAGCGGAATATAT ATACTACACGTCCTCCGGGACGTGCTAAGAACAATCTAGGCCTTCTGATG AAAACCTCCTCAGAAAAATCTTGAAAATTGCTACTTAATAGTAAAATTTA GAACATATATAAGAACATTTTATACCTAGTTTTTAGAAAGAAATTTTGAA ATGAATAAAAACGATTACAAACATATTTTTTTTAAATGATATTATTCAAG TTTTAGATTTTTATGCAATATTTTAATATTTTTATTTTTTTGTTGCAGGA CAAATATGAGAACTTTCGCGATTCTTCTTGCCGTGATACTCACAGCCTCG GTAAGTTGTTGCAATTTTCACCAGTTGCTTTTAAAAACGCATTTCCATTT GTACTGTGAGCAAGTGGGACATTTTGAAGAGGAGTAAAACTCTTTTTCCT GCTTGCTAACGCTAACGGGATATATGCGGTAATGCTAGGACGCCCAAAAG CGTGGCAAGTTATATCTCAGTCGATAACTTACACTCGAAAGGCTGTAGGT AGGTCACGATCATCGTTCCACTTAACGAATAATTAGCAAAATACATGTAA ATCAAATTGCAGTTAAAGTCATTGAGTAAATGGAATGTGGCTAGATGTGG TGCTCCACCCCACGCGAAATCAACCCAGAAAGCTAGAGCTAACACAAATG GATTATTTCCCCCGCTGTACGGTTGCTAATGACCCTAGTCCTCTCCGGGC CGAGTCCTCAAATGATTATGTTTTTTTTACTCTGAAACCTCGTTTTTCTG GTGTAGGCTTGTGTTTGTGTTTGCGTTTCTTAGGAATCTTGTTTGTCGTA AAACAAAATGTTGTCAGTATTTTCTCGTGTTTATATTTTAGGCAAACCAT TTCAATTTGGAATTCGAACAAGACGGTTCAAAATATATTGAAAAAGTTGA TATATTCAAGAAAACTGGAGTCATTGTGTATGATGTACCACGACATAGTA ACACTTCGGCTATGACGCTCTTAAAAGATTACAATCTGGTAAAATATAAA GTTAAACTAAACTCCTTTTGAAACTTTATCTAATGGTAATGGTCTCTCCA TAATTTCCAAATTTCCAGAAATCTGCGATGGAGTGCTATTTTGCTTGGCT CGGGATTGTGCGTCGAGCACTTCCCCGTATTTTATCTTGTTACGGAAAAT AAACCTATTTTTTCAAATTTTCTATTCATGATATCCATGACGTAATCTTT TTTACGGAAACCGTCTAAAGTTGTATTTTGTATTTCTATATGTTTTCCTA ATTTTTTAGAGATTGAATGTGATGAAAGATGTTGTTCAAAAAAGATGTTA TGTCTACCCGATGGAGAAAAATGAACCAACTCTGGATTCCGTTGAGAAAG GATTTGAAATGGTAAGCTACTTTTACATCGGTTGTATTGGTCCGAGCAAA TTCATCAGCTGTCTTTGATATTCTTCGATATTTGATCTAAATCACTCCAG AGTAAACAACATACCGGAAAAAGTTGTTTCTATTAACCCAGTGCAGTGAA AAAATGTTATTGTTACCAAGGAAGATTGGGATTAAAATATAACAAATCTA AAAATGCAATAGATTTGAAGAACCAAACTGAAAGTAAAGTAAAAAGTAAG CCTTTTTGGACCGAGTTGACCGTATATATTTTTTCGAATGTAATTTAACC CCGATTAACTTTGTCTCGCATTATGGCATTGCATAGGGTGTTGTTTTTAG CTTACATCGATTTTTCCTGCATACGTCATCTGAAAATAAGTCTTCCATTT TTTATAGGTAAAAGGAAAATTCCCTAGCAACAAGTTCTTGGTAAATCAAT TGAACATGTTTGCACAGGACGAAGTGGATACATCAACCCTGTCCAAAGCA GTGATCACTTTCTGTCAAAACTATAAAATTCTCAATGTTGAATTTTATTC CGAACAACAAGCAGAAAAACTCATGCAACAAAAAATCAAACGTATGTAAA TAATATAGTACCTCATCGGTAGAAAATTCGTCGGTTAAAAAATTCGTCGG CAAAAAAAATTCGTCGGCAAAAAACTTCGTCACTTGCCAATAATTTCGTC ACTTCTTGCCAACTTTTTTTGCTAAAATACCTTATCGGTAGAATATTTGT CGGCAAAAATATTCGTCGGCAAAAAAAATTCGTCGGTAAAAAATTTCGTC ACCAAGCGATTTTTTCGTCACTTTTTACCGACGAGTTTTCTACCGTTAAG GTACTCTTTTAAATTTCTTTTTTTTTATAAAAGTGTAAGTGNCGTCACTT TTTACCGACGAATTTTCTACCGATAAGGTACTCTTTTAAATCTCTTTTTT TTATAAAAGTGTAAGTGAATTTCGGGCAAGATGAGCAGAAGACCTCACTA GCTCGATTGTTACTTTGACCACTTTGACTTGGGGTGACATTTCCCAGTAA AACCCTTACTTATTTACAGTAAGGAATATTGTATTTGTAGAGATAAAGTT TATTTACTTAAAATCTGTACAGGACAAGCTTAGATCACACTATAATGGAT TTTTTTCATCCAAGCTTTCTATGAATTGTTCTTAAAATTCTCATCGAAAA TGGTCATTTATAGCTGTTTTATGCAAGTTTTTTCTTTTAAATAGTATTTT CTTCTTATATAAAGTCCATTATTGTCCTTTAAAACTGTTCTTAATTCTCA TAAAAACGCGTGTATCTATCTCTATCTTCAGAACATTTCTCCACACGTTC AAAACGAAGAGATGTACACGTCGGTTCTTTCATGGCTTGCCAAGACGGAT CAACAATGACAGAGCAATTGAATGATCTGGTCAGATGTTGGAACGCAAAA AGAGTTGACATGATCAAAACTCGATGTGACATCAAATACTGGAAGATCTG TGGCAACAATGTTCATTTCGAGACATTGACATGCAAAGCAGCCGGTAACG AACGTCACGCTTGTGTCATTCCTGAACACACACGAGCTAATGTTATTTGC TGTAGAAATAAATGTATGTTGTAAATTGGCAATAAATATGCTTTGGTTTC TCAAGATTGCAAAGAGTTAGAACCTCAATGATTTTGATTCTCCAAAGCTT CCAAATGTTCGTAATCCTGTTCTTAATTTTTTGACCTCGAAGCCTTGTGT TCTTATATACTTTGTTGTTATAAAAAAAAAGTGTATTCTTTTTCGCAGGA CTATTCGCAAATTCTTCGCTACGGCATGACGTCAGAGCTGGGGGGGGGGG GNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNGGGGGGGGGGGGGGGGGCAGAACACTTACTAAAGAT TAATTATGAATTTTCAGTAAACAAAATCTTTTAGTGAGTTAGAAGTGATT TAATTTTATTGGTTGGAAAGTACATCACCGTGAACCATGACTTTCCATGG GGAAGAAATATTTCGTGGGCATAAGATCTTTCAGAACTATGGTACTATTA TAATCAGTTTGTCCAATTGTAAAAACCACATGCAACACTGGAAAATATTT GATACTCCAAAAAAGAATTCCAAACAAAATTTTCACTCCATGGAAAATTC AGCTAAAAACAATGGGTTTCAGTGGTTGTAATTGTGTTCGATAACAGAGG AATTACTGGGCAGTTAGCTTGGAAGCCCCTCCCTTAAAAAAAGAACAACA TAACAACATTCCTTTGTAAAGAACTTCCAACTCCAAGTCAGAAAACAAAA TAAACTCCTTCCCTAAATCCTAGGGGGTGCACACTATGACGGGGGTTATT TTGTACGCTATATTCTTGTAGTCTTCCTTACTTTAATATATTTTCTTACA ATTTTAGTCGTATTGACTTCTTATGAACTAACCTTGTTTTTTTCTTGTTT TCTCCTGATGGCAAAGTTTTCACTGATCTAAATAAGTCTTCCTCCACACT GAAATCTGCGATCGGTACCTGGAAATTGTTGCTTGCTATAAATAAAAAGG GAAATAAAAGGCACCTCAAAATTTTATATAAGAAGATTTGGTATTTCGTG AAATCATGCGAGAAGTTTTCTTCAAAGAAGGAGGTCTCGAGATAGCATGA AAAAGACGCGCGTTCGATAATTTCGAGGTTACGCAAAATGATATTTAGGC CCTTAAACGGTATAATGTGGTCCTGTACATAAATTTTCATTTACAAGTTT TGTTTATACGAATTATGTACAGGCCGACCTATACGCGTCTAAGGTCCCAC GTATCCTCTTGCGTTACCTCGCTAATAGGCTAACCGGCAAGATGTTTGTT CTGCTTTACGACAAAATGGCTTTTTTTCTAAAATCGGAGCTTTCTCTTTA TTTCTTCGTTTTGGGGTTTCGCATTATAGTTCGCATAGTGAAATCGGCAG AGAGTACATCTCATCGTCACTTTATAAGAACAACAAATTTATTTATTTTT CTTTATGACCATAGCAACGAGTAAAAATCAAATTTGAAAACATTATTCAA GGTTCTTGTCGGCCAAATCAGGGATTGCTAAATCAGCAATATTCACAGTA GTGCGCATGCGCATGAATCAGCACTACAAGCTGGCGTGCGAAGACTGTTT TGTTATTGTATGAATTACCATTGCCAAAAGTCCCAGATACGCGTGTTTTT TTATAAGAAATAGCTTGATCATTTGCTGAAATATAATGGTCAATGAGCGG GGGAGGGGGGTGAAATAAGAGGGGGGGGTAATTCGAAGACAGAGTTTTTT TTAACTGATATCAATGTCAACAACAAAAAAAGAAACTTTAACAAATGAAC ACGTAAAATAAGAACCAATACTAACAAACAGGAAAATTTTAACAAGGTTA AGGTCTATCTACACTGTAATAAAATTTTAAATTATTCGAATTTAANNNNN NNNNNNNNNAAAGAAACTTTAACAAATAAACACGTAAAATAAGAACCAAT ACTAACAAAAAGAAAATTTTTAACAAGTTTAAGGTCTATCTACACTGTAA TAAAATTTTAAATTATTCGAATTTAATTAGCGGGGGGGGGGGTCTTAATA AGAGCGGGGGATGGATTTTTTTTCATTTAACAATTAGCGGGGGGCGTCTA TTCGGGAGACAAGAGTATCACTCTCTCGAAGACTTTGGACAATATTGGCA AAATACTGATGGGTCTGTGATCAATAAGTGATTGCGGATCATTGACTTTT ATTTCGGGACAGGACATATGCGGCTTATCTTCCAGTCATCTGGGAAGATT GATGATTCGATACAGCTGTTAATAATGTGGATTAGGGGTCACACGAGATA TTCTGAAACTGGTTTGATAAATGACAGTATATTGTCGTGACCGGTCGAAC AGTCTGATCTTAATTTCAACATTGCTTTAGATACCTCATCACATGTTGCA GGACGGAGATGGAAATTGTCTTGGTGATCAGGTAAGTTGCGAATAAAGAA ATTTGATAGTTTTTCTGGGTTCTTTGCTGTTGTGCGTACAGCTGTCGAAT TGAAAAAGGCGTTGATTTCATCAGGATCAATATTCATTCGTTTCAAACGA GGATGAATTATTTTATTCATCACCTTCCAGGTCTCCGAAGATGTTTTGTT TGAGAGAAGACTTTTCAGAAATACACTCTTCTCGAGATGCATAAATTTAT TGTTGTCCTCGTTTTCAAACAGATTTCATTGCTAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00047353TCONS_00047353Clytia hemisphaericatranscript
TCONS_00047352TCONS_00047352Clytia hemisphaericatranscript
TCONS_00047351TCONS_00047351Clytia hemisphaericatranscript
TCONS_00047350TCONS_00047350Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00047351-proteinTCONS_00047351-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_126supercontigscaffold_126:140024..145908 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.63 1.51 1.71 2.71 1.28 1.45 0.79 1.19 0.29 0.57 0.69 0.93 39.4 52.18 1947.75 2227.52 298.88 311.98 1256.72 1276.17 152.94 148.62 1752.34 1417.71 1065.72 1239.3 78.59 96.01 7164.67 9109.7