TCONS_00047351 (transcript) - C. hemisphaerica

Overview
NameTCONS_00047351
Unique NameTCONS_00047351
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length932

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00047351 ID=TCONS_00047351|Name=TCONS_00047351|organism=Clytia hemisphaerica|type=transcript|length=932bp
CCAAGTTAATGGTCTATTTACACGACACGATAGATGTGTATAAATAGCCA
GGATAATTCTTACATTTCCATCGTTCAAGTTTATTTGGATTTATCAATCA
CCATTTGAAAAGACTTCAGGACAAATATGAGAACTTTCGCGATTCTTCTT
GCCGTGATACTCACAGCCTCGGCAAACCATTTCAATTTGGAATTCGAACA
AGACGgttcaaaatatattgaaaaagttgatataTTCAAGAAAACTGGAG
TCATTGTGTATGATGTACCACGACATAGTAACACTTCGGCTATGACGCTC
TTAAAAGATTACAATCTGAGATTGAATGTGATGAAAGATGTTGTTCAAAA
AAGATGTTATGTCTACCCGATGGAGAAAAATGAACCAACTCTGGATTCCG
TTGAGAAAGGATTTGAAATGGTAAAAGGAAAATTCCCTAGCAACAAGTTC
TTGGTAAATCAATTGAACATGTTTGCACAGGACGAAGTGGATACATCAAC
CCTGTCCAAAGCAGTGATCACTTTCTGTCAAAACTATAAAATTCTCAATG
TTGAATTTTATTCCGAACAACAAGCAGAAAAACTCATGCAACAAAAAATC
AAACAACATTTCTCCACACGTTCAAAACGAAGAGATGTACACGTCGGTTC
TTTCATGGCTTGCCAAGACGGATCAACAATGACAGAGCAATTGAATGATC
TGGTCAGATGTTGGAACGCAAAAAGAGTTGACATGATCAAAACTCGATGT
GACATCAAATACTGGAAGATCTGTGGCAACAATGTTCATTTCGAGACATT
GACATGCAAAGCAGCCGGTAACGAACGTCACGCTTGTGTCATTCCTGAAC
ACACACGAGCTAATGTTATTTGCTGTAGAAATAAATATACCTCATCACAT
GTTGCAGGACGGAGATGGAAATTGTCTTGGTG
Run BLAST on NCBI

protein sequence of TCONS_00047351-protein

>TCONS_00047351-protein ID=TCONS_00047351-protein|Name=TCONS_00047351-protein|organism=Clytia hemisphaerica|type=polypeptide|length=268bp
MRTFAILLAVILTASANHFNLEFEQDGSKYIEKVDIFKKTGVIVYDVPRH
SNTSAMTLLKDYNLRLNVMKDVVQKRCYVYPMEKNEPTLDSVEKGFEMVK
GKFPSNKFLVNQLNMFAQDEVDTSTLSKAVITFCQNYKILNVEFYSEQQA
EKLMQQKIKQHFSTRSKRRDVHVGSFMACQDGSTMTEQLNDLVRCWNAKR
VDMIKTRCDIKYWKICGNNVHFETLTCKAAGNERHACVIPEHTRANVICC
RNKYTSSHVAGRRWKLSW
Run BLAST on NCBI

transcript from alignment at scaffold_126:140283..145908-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00047351 ID=TCONS_00047351|Name=TCONS_00047351|organism=Clytia hemisphaerica|type=transcript|length=5626bp|location=Sequence derived from alignment at scaffold_126:140283..145908- (Clytia hemisphaerica)
CCAAGTTAATGGTCTATTTACACGACACGATAGATGTGTATAAATAGCCA
GGATAATTCTTACATTTCCATCGTTCAAGTTTATTTGGATTTATCAATCA
CCATTTGAAAAGACTTCAGGTAATTATTAATTTTATGCCATAAAGCTTAT
ATTTCCTAGACTATAATGGTTCTAGATCAAGCTGAATTTATGCAAAATCT
TCAATAATGTTTACATAGGCAATATTTTTCACACATCAAGCGGAATATAT
ATACTACACGTCCTCCGGGACGTGCTAAGAACAATCTAGGCCTTCTGATG
AAAACCTCCTCAGAAAAATCTTGAAAATTGCTACTTAATAGTAAAATTTA
GAACATATATAAGAACATTTTATACCTAGTTTTTAGAAAGAAATTTTGAA
ATGAATAAAAACGATTACAAACATATTTTTTTTAAATGATATTATTCAAG
TTTTAGATTTTTATGCAATATTTTAATATTTTTATTTTTTTGTTGCAGGA
CAAATATGAGAACTTTCGCGATTCTTCTTGCCGTGATACTCACAGCCTCG
GTAAGTTGTTGCAATTTTCACCAGTTGCTTTTAAAAACGCATTTCCATTT
GTACTGTGAGCAAGTGGGACATTTTGAAGAGGAGTAAAACTCTTTTTCCT
GCTTGCTAACGCTAACGGGATATATGCGGTAATGCTAGGACGCCCAAAAG
CGTGGCAAGTTATATCTCAGTCGATAACTTACACTCGAAAGGCTGTAGGT
AGGTCACGATCATCGTTCCACTTAACGAATAATTAGCAAAATACATGTAA
ATCAAATTGCAGTTAAAGTCATTGAGTAAATGGAATGTGGCTAGATGTGG
TGCTCCACCCCACGCGAAATCAACCCAGAAAGCTAGAGCTAACACAAATG
GATTATTTCCCCCGCTGTACGGTTGCTAATGACCCTAGTCCTCTCCGGGC
CGAGTCCTCAAATGATTATGTTTTTTTTACTCTGAAACCTCGTTTTTCTG
GTGTAGGCTTGTGTTTGTGTTTGCGTTTCTTAGGAATCTTGTTTGTCGTA
AAACAAAATGTTGTCAGTATTTTCTCGTGTTTATATTTTAGGCAAACCAT
TTCAATTTGGAATTCGAACAAGACGGTTCAAAATATATTGAAAAAGTTGA
TATATTCAAGAAAACTGGAGTCATTGTGTATGATGTACCACGACATAGTA
ACACTTCGGCTATGACGCTCTTAAAAGATTACAATCTGGTAAAATATAAA
GTTAAACTAAACTCCTTTTGAAACTTTATCTAATGGTAATGGTCTCTCCA
TAATTTCCAAATTTCCAGAAATCTGCGATGGAGTGCTATTTTGCTTGGCT
CGGGATTGTGCGTCGAGCACTTCCCCGTATTTTATCTTGTTACGGAAAAT
AAACCTATTTTTTCAAATTTTCTATTCATGATATCCATGACGTAATCTTT
TTTACGGAAACCGTCTAAAGTTGTATTTTGTATTTCTATATGTTTTCCTA
ATTTTTTAGAGATTGAATGTGATGAAAGATGTTGTTCAAAAAAGATGTTA
TGTCTACCCGATGGAGAAAAATGAACCAACTCTGGATTCCGTTGAGAAAG
GATTTGAAATGGTAAGCTACTTTTACATCGGTTGTATTGGTCCGAGCAAA
TTCATCAGCTGTCTTTGATATTCTTCGATATTTGATCTAAATCACTCCAG
AGTAAACAACATACCGGAAAAAGTTGTTTCTATTAACCCAGTGCAGTGAA
AAAATGTTATTGTTACCAAGGAAGATTGGGATTAAAATATAACAAATCTA
AAAATGCAATAGATTTGAAGAACCAAACTGAAAGTAAAGTAAAAAGTAAG
CCTTTTTGGACCGAGTTGACCGTATATATTTTTTCGAATGTAATTTAACC
CCGATTAACTTTGTCTCGCATTATGGCATTGCATAGGGTGTTGTTTTTAG
CTTACATCGATTTTTCCTGCATACGTCATCTGAAAATAAGTCTTCCATTT
TTTATAGGTAAAAGGAAAATTCCCTAGCAACAAGTTCTTGGTAAATCAAT
TGAACATGTTTGCACAGGACGAAGTGGATACATCAACCCTGTCCAAAGCA
GTGATCACTTTCTGTCAAAACTATAAAATTCTCAATGTTGAATTTTATTC
CGAACAACAAGCAGAAAAACTCATGCAACAAAAAATCAAACGTATGTAAA
TAATATAGTACCTCATCGGTAGAAAATTCGTCGGTTAAAAAATTCGTCGG
CAAAAAAAATTCGTCGGCAAAAAACTTCGTCACTTGCCAATAATTTCGTC
ACTTCTTGCCAACTTTTTTTGCTAAAATACCTTATCGGTAGAATATTTGT
CGGCAAAAATATTCGTCGGCAAAAAAAATTCGTCGGTAAAAAATTTCGTC
ACCAAGCGATTTTTTCGTCACTTTTTACCGACGAGTTTTCTACCGTTAAG
GTACTCTTTTAAATTTCTTTTTTTTTATAAAAGTGTAAGTGNCGTCACTT
TTTACCGACGAATTTTCTACCGATAAGGTACTCTTTTAAATCTCTTTTTT
TTATAAAAGTGTAAGTGAATTTCGGGCAAGATGAGCAGAAGACCTCACTA
GCTCGATTGTTACTTTGACCACTTTGACTTGGGGTGACATTTCCCAGTAA
AACCCTTACTTATTTACAGTAAGGAATATTGTATTTGTAGAGATAAAGTT
TATTTACTTAAAATCTGTACAGGACAAGCTTAGATCACACTATAATGGAT
TTTTTTCATCCAAGCTTTCTATGAATTGTTCTTAAAATTCTCATCGAAAA
TGGTCATTTATAGCTGTTTTATGCAAGTTTTTTCTTTTAAATAGTATTTT
CTTCTTATATAAAGTCCATTATTGTCCTTTAAAACTGTTCTTAATTCTCA
TAAAAACGCGTGTATCTATCTCTATCTTCAGAACATTTCTCCACACGTTC
AAAACGAAGAGATGTACACGTCGGTTCTTTCATGGCTTGCCAAGACGGAT
CAACAATGACAGAGCAATTGAATGATCTGGTCAGATGTTGGAACGCAAAA
AGAGTTGACATGATCAAAACTCGATGTGACATCAAATACTGGAAGATCTG
TGGCAACAATGTTCATTTCGAGACATTGACATGCAAAGCAGCCGGTAACG
AACGTCACGCTTGTGTCATTCCTGAACACACACGAGCTAATGTTATTTGC
TGTAGAAATAAATGTATGTTGTAAATTGGCAATAAATATGCTTTGGTTTC
TCAAGATTGCAAAGAGTTAGAACCTCAATGATTTTGATTCTCCAAAGCTT
CCAAATGTTCGTAATCCTGTTCTTAATTTTTTGACCTCGAAGCCTTGTGT
TCTTATATACTTTGTTGTTATAAAAAAAAAGTGTATTCTTTTTCGCAGGA
CTATTCGCAAATTCTTCGCTACGGCATGACGTCAGAGCTGGGGGGGGGGG
GNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNGGGGGGGGGGGGGGGGGCAGAACACTTACTAAAGAT
TAATTATGAATTTTCAGTAAACAAAATCTTTTAGTGAGTTAGAAGTGATT
TAATTTTATTGGTTGGAAAGTACATCACCGTGAACCATGACTTTCCATGG
GGAAGAAATATTTCGTGGGCATAAGATCTTTCAGAACTATGGTACTATTA
TAATCAGTTTGTCCAATTGTAAAAACCACATGCAACACTGGAAAATATTT
GATACTCCAAAAAAGAATTCCAAACAAAATTTTCACTCCATGGAAAATTC
AGCTAAAAACAATGGGTTTCAGTGGTTGTAATTGTGTTCGATAACAGAGG
AATTACTGGGCAGTTAGCTTGGAAGCCCCTCCCTTAAAAAAAGAACAACA
TAACAACATTCCTTTGTAAAGAACTTCCAACTCCAAGTCAGAAAACAAAA
TAAACTCCTTCCCTAAATCCTAGGGGGTGCACACTATGACGGGGGTTATT
TTGTACGCTATATTCTTGTAGTCTTCCTTACTTTAATATATTTTCTTACA
ATTTTAGTCGTATTGACTTCTTATGAACTAACCTTGTTTTTTTCTTGTTT
TCTCCTGATGGCAAAGTTTTCACTGATCTAAATAAGTCTTCCTCCACACT
GAAATCTGCGATCGGTACCTGGAAATTGTTGCTTGCTATAAATAAAAAGG
GAAATAAAAGGCACCTCAAAATTTTATATAAGAAGATTTGGTATTTCGTG
AAATCATGCGAGAAGTTTTCTTCAAAGAAGGAGGTCTCGAGATAGCATGA
AAAAGACGCGCGTTCGATAATTTCGAGGTTACGCAAAATGATATTTAGGC
CCTTAAACGGTATAATGTGGTCCTGTACATAAATTTTCATTTACAAGTTT
TGTTTATACGAATTATGTACAGGCCGACCTATACGCGTCTAAGGTCCCAC
GTATCCTCTTGCGTTACCTCGCTAATAGGCTAACCGGCAAGATGTTTGTT
CTGCTTTACGACAAAATGGCTTTTTTTCTAAAATCGGAGCTTTCTCTTTA
TTTCTTCGTTTTGGGGTTTCGCATTATAGTTCGCATAGTGAAATCGGCAG
AGAGTACATCTCATCGTCACTTTATAAGAACAACAAATTTATTTATTTTT
CTTTATGACCATAGCAACGAGTAAAAATCAAATTTGAAAACATTATTCAA
GGTTCTTGTCGGCCAAATCAGGGATTGCTAAATCAGCAATATTCACAGTA
GTGCGCATGCGCATGAATCAGCACTACAAGCTGGCGTGCGAAGACTGTTT
TGTTATTGTATGAATTACCATTGCCAAAAGTCCCAGATACGCGTGTTTTT
TTATAAGAAATAGCTTGATCATTTGCTGAAATATAATGGTCAATGAGCGG
GGGAGGGGGGTGAAATAAGAGGGGGGGGTAATTCGAAGACAGAGTTTTTT
TTAACTGATATCAATGTCAACAACAAAAAAAGAAACTTTAACAAATGAAC
ACGTAAAATAAGAACCAATACTAACAAACAGGAAAATTTTAACAAGGTTA
AGGTCTATCTACACTGTAATAAAATTTTAAATTATTCGAATTTAANNNNN
NNNNNNNNNAAAGAAACTTTAACAAATAAACACGTAAAATAAGAACCAAT
ACTAACAAAAAGAAAATTTTTAACAAGTTTAAGGTCTATCTACACTGTAA
TAAAATTTTAAATTATTCGAATTTAATTAGCGGGGGGGGGGGTCTTAATA
AGAGCGGGGGATGGATTTTTTTTCATTTAACAATTAGCGGGGGGCGTCTA
TTCGGGAGACAAGAGTATCACTCTCTCGAAGACTTTGGACAATATTGGCA
AAATACTGATGGGTCTGTGATCAATAAGTGATTGCGGATCATTGACTTTT
ATTTCGGGACAGGACATATGCGGCTTATCTTCCAGTCATCTGGGAAGATT
GATGATTCGATACAGCTGTTAATAATGTGGATTAGGGGTCACACGAGATA
TTCTGAAACTGGTTTGATAAATGACAGTATATTGTCGTGACCGGTCGAAC
AGTCTGATCTTAATTTCAACATTGCTTTAGATACCTCATCACATGTTGCA
GGACGGAGATGGAAATTGTCTTGGTG

Coding sequence (CDS) from alignment at scaffold_126:140283..145908-

>TCONS_00047351 ID=TCONS_00047351|Name=TCONS_00047351|organism=Clytia hemisphaerica|type=CDS|length=4824bp|location=Sequence derived from alignment at scaffold_126:140283..145908- (Clytia hemisphaerica)
ATACCTCATCACATGTTGCAGGACGGAGATGGAAATTGTCTTGGAACATT
TCTCCACACGTTCAAAACGAAGAGATGTACACGTCGGTTCTTTCATGGCT
TGCCAAGACGGATCAACAATGACAGAGCAATTGAATGATCTGGTCAGATG
TTGGAACGCAAAAAGAGTTGACATGATCAAAACTCGATGTGACATCAAAT
ACTGGAAGATCTGTGGCAACAATGTTCATTTCGAGACATTGACATGCAAA
GCAGCCGGTAACGAACGTCACGCTTGTGTCATTCCTGAACACACACGAGC
TAATGTTATTTGCTGTAGAAATAAATGTAAAAGGAAAATTCCCTAGCAAC
AAGTTCTTGGTAAATCAATTGAACATGTTTGCACAGGACGAAGTGGATAC
ATCAACCCTGTCCAAAGCAGTGATCACTTTCTGTCAAAACTATAAAATTC
TCAATGTTGAATTTTATTCCGAACAACAAGCAGAAAAACTCATGCAACAA
AAAATCAAACAGATTGAATGTGATGAAAGATGTTGTTCAAAAAAGATGTT
ATGTCTACCCGATGGAGAAAAATGAACCAACTCTGGATTCCGTTGAGAAA
GGATTTGAAATGGCAAACCATTTCAATTTGGAATTCGAACAAGACGGTTC
AAAATATATTGAAAAAGTTGATATATTCAAGAAAACTGGAGTCATTGTGT
ATGATGTACCACGACATAGTAACACTTCGGCTATGACGCTCTTAAAAGAT
TACAATCTGATGAGAACTTTCGCGATTCTTCTTGCCGTGATACTCACAGC
CTCGATACCTCATCACATGTTGCAGGACGGAGATGGAAATTGTCTTGGAA
CATTTCTCCACACGTTCAAAACGAAGAGATGTACACGTCGGTTCTTTCAT
GGCTTGCCAAGACGGATCAACAATGACAGAGCAATTGAATGATCTGGTCA
GATGTTGGAACGCAAAAAGAGTTGACATGATCAAAACTCGATGTGACATC
AAATACTGGAAGATCTGTGGCAACAATGTTCATTTCGAGACATTGACATG
CAAAGCAGCCGGTAACGAACGTCACGCTTGTGTCATTCCTGAACACACAC
GAGCTAATGTTATTTGCTGTAGAAATAAATGTAAAAGGAAAATTCCCTAG
CAACAAGTTCTTGGTAAATCAATTGAACATGTTTGCACAGGACGAAGTGG
ATACATCAACCCTGTCCAAAGCAGTGATCACTTTCTGTCAAAACTATAAA
ATTCTCAATGTTGAATTTTATTCCGAACAACAAGCAGAAAAACTCATGCA
ACAAAAAATCAAACAGATTGAATGTGATGAAAGATGTTGTTCAAAAAAGA
TGTTATGTCTACCCGATGGAGAAAAATGAACCAACTCTGGATTCCGTTGA
GAAAGGATTTGAAATGGCAAACCATTTCAATTTGGAATTCGAACAAGACG
GTTCAAAATATATTGAAAAAGTTGATATATTCAAGAAAACTGGAGTCATT
GTGTATGATGTACCACGACATAGTAACACTTCGGCTATGACGCTCTTAAA
AGATTACAATCTGATGAGAACTTTCGCGATTCTTCTTGCCGTGATACTCA
CAGCCTCGATACCTCATCACATGTTGCAGGACGGAGATGGAAATTGTCTT
GGAACATTTCTCCACACGTTCAAAACGAAGAGATGTACACGTCGGTTCTT
TCATGGCTTGCCAAGACGGATCAACAATGACAGAGCAATTGAATGATCTG
GTCAGATGTTGGAACGCAAAAAGAGTTGACATGATCAAAACTCGATGTGA
CATCAAATACTGGAAGATCTGTGGCAACAATGTTCATTTCGAGACATTGA
CATGCAAAGCAGCCGGTAACGAACGTCACGCTTGTGTCATTCCTGAACAC
ACACGAGCTAATGTTATTTGCTGTAGAAATAAATGTAAAAGGAAAATTCC
CTAGCAACAAGTTCTTGGTAAATCAATTGAACATGTTTGCACAGGACGAA
GTGGATACATCAACCCTGTCCAAAGCAGTGATCACTTTCTGTCAAAACTA
TAAAATTCTCAATGTTGAATTTTATTCCGAACAACAAGCAGAAAAACTCA
TGCAACAAAAAATCAAACAGATTGAATGTGATGAAAGATGTTGTTCAAAA
AAGATGTTATGTCTACCCGATGGAGAAAAATGAACCAACTCTGGATTCCG
TTGAGAAAGGATTTGAAATGGCAAACCATTTCAATTTGGAATTCGAACAA
GACGGTTCAAAATATATTGAAAAAGTTGATATATTCAAGAAAACTGGAGT
CATTGTGTATGATGTACCACGACATAGTAACACTTCGGCTATGACGCTCT
TAAAAGATTACAATCTGATGAGAACTTTCGCGATTCTTCTTGCCGTGATA
CTCACAGCCTCGATACCTCATCACATGTTGCAGGACGGAGATGGAAATTG
TCTTGGAACATTTCTCCACACGTTCAAAACGAAGAGATGTACACGTCGGT
TCTTTCATGGCTTGCCAAGACGGATCAACAATGACAGAGCAATTGAATGA
TCTGGTCAGATGTTGGAACGCAAAAAGAGTTGACATGATCAAAACTCGAT
GTGACATCAAATACTGGAAGATCTGTGGCAACAATGTTCATTTCGAGACA
TTGACATGCAAAGCAGCCGGTAACGAACGTCACGCTTGTGTCATTCCTGA
ACACACACGAGCTAATGTTATTTGCTGTAGAAATAAATGTAAAAGGAAAA
TTCCCTAGCAACAAGTTCTTGGTAAATCAATTGAACATGTTTGCACAGGA
CGAAGTGGATACATCAACCCTGTCCAAAGCAGTGATCACTTTCTGTCAAA
ACTATAAAATTCTCAATGTTGAATTTTATTCCGAACAACAAGCAGAAAAA
CTCATGCAACAAAAAATCAAACAGATTGAATGTGATGAAAGATGTTGTTC
AAAAAAGATGTTATGTCTACCCGATGGAGAAAAATGAACCAACTCTGGAT
TCCGTTGAGAAAGGATTTGAAATGGCAAACCATTTCAATTTGGAATTCGA
ACAAGACGGTTCAAAATATATTGAAAAAGTTGATATATTCAAGAAAACTG
GAGTCATTGTGTATGATGTACCACGACATAGTAACACTTCGGCTATGACG
CTCTTAAAAGATTACAATCTGATGAGAACTTTCGCGATTCTTCTTGCCGT
GATACTCACAGCCTCGATACCTCATCACATGTTGCAGGACGGAGATGGAA
ATTGTCTTGGAACATTTCTCCACACGTTCAAAACGAAGAGATGTACACGT
CGGTTCTTTCATGGCTTGCCAAGACGGATCAACAATGACAGAGCAATTGA
ATGATCTGGTCAGATGTTGGAACGCAAAAAGAGTTGACATGATCAAAACT
CGATGTGACATCAAATACTGGAAGATCTGTGGCAACAATGTTCATTTCGA
GACATTGACATGCAAAGCAGCCGGTAACGAACGTCACGCTTGTGTCATTC
CTGAACACACACGAGCTAATGTTATTTGCTGTAGAAATAAATGTAAAAGG
AAAATTCCCTAGCAACAAGTTCTTGGTAAATCAATTGAACATGTTTGCAC
AGGACGAAGTGGATACATCAACCCTGTCCAAAGCAGTGATCACTTTCTGT
CAAAACTATAAAATTCTCAATGTTGAATTTTATTCCGAACAACAAGCAGA
AAAACTCATGCAACAAAAAATCAAACAGATTGAATGTGATGAAAGATGTT
GTTCAAAAAAGATGTTATGTCTACCCGATGGAGAAAAATGAACCAACTCT
GGATTCCGTTGAGAAAGGATTTGAAATGGCAAACCATTTCAATTTGGAAT
TCGAACAAGACGGTTCAAAATATATTGAAAAAGTTGATATATTCAAGAAA
ACTGGAGTCATTGTGTATGATGTACCACGACATAGTAACACTTCGGCTAT
GACGCTCTTAAAAGATTACAATCTGATGAGAACTTTCGCGATTCTTCTTG
CCGTGATACTCACAGCCTCGATACCTCATCACATGTTGCAGGACGGAGAT
GGAAATTGTCTTGGAACATTTCTCCACACGTTCAAAACGAAGAGATGTAC
ACGTCGGTTCTTTCATGGCTTGCCAAGACGGATCAACAATGACAGAGCAA
TTGAATGATCTGGTCAGATGTTGGAACGCAAAAAGAGTTGACATGATCAA
AACTCGATGTGACATCAAATACTGGAAGATCTGTGGCAACAATGTTCATT
TCGAGACATTGACATGCAAAGCAGCCGGTAACGAACGTCACGCTTGTGTC
ATTCCTGAACACACACGAGCTAATGTTATTTGCTGTAGAAATAAATGTAA
AAGGAAAATTCCCTAGCAACAAGTTCTTGGTAAATCAATTGAACATGTTT
GCACAGGACGAAGTGGATACATCAACCCTGTCCAAAGCAGTGATCACTTT
CTGTCAAAACTATAAAATTCTCAATGTTGAATTTTATTCCGAACAACAAG
CAGAAAAACTCATGCAACAAAAAATCAAACAGATTGAATGTGATGAAAGA
TGTTGTTCAAAAAAGATGTTATGTCTACCCGATGGAGAAAAATGAACCAA
CTCTGGATTCCGTTGAGAAAGGATTTGAAATGGCAAACCATTTCAATTTG
GAATTCGAACAAGACGGTTCAAAATATATTGAAAAAGTTGATATATTCAA
GAAAACTGGAGTCATTGTGTATGATGTACCACGACATAGTAACACTTCGG
CTATGACGCTCTTAAAAGATTACAATCTGATGAGAACTTTCGCGATTCTT
CTTGCCGTGATACTCACAGCCTCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030163XLOC_030163Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00047351-proteinTCONS_00047351-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00047351-exon-scaffold_126-1575043694:145790..145908TCONS_00047351-exon-scaffold_126-1575043694:145790..145908Clytia hemisphaericaexon
TCONS_00047351-exon-scaffold_126-1575043694:145359..145410TCONS_00047351-exon-scaffold_126-1575043694:145359..145410Clytia hemisphaericaexon
TCONS_00047351-exon-scaffold_126-1575043694:144671..144817TCONS_00047351-exon-scaffold_126-1575043694:144671..144817Clytia hemisphaericaexon
TCONS_00047351-exon-scaffold_126-1575043694:144298..144399TCONS_00047351-exon-scaffold_126-1575043694:144298..144399Clytia hemisphaericaexon
TCONS_00047351-exon-scaffold_126-1575043694:143718..143901TCONS_00047351-exon-scaffold_126-1575043694:143718..143901Clytia hemisphaericaexon
TCONS_00047351-exon-scaffold_126-1575043694:142696..142977TCONS_00047351-exon-scaffold_126-1575043694:142696..142977Clytia hemisphaericaexon
TCONS_00047351-exon-scaffold_126-1575043694:140283..140328TCONS_00047351-exon-scaffold_126-1575043694:140283..140328Clytia hemisphaericaexon
TCONS_00047351-exon-scaffold_126-1510915933:145790..145908TCONS_00047351-exon-scaffold_126-1510915933:145790..145908Clytia hemisphaericaexon
TCONS_00047351-exon-scaffold_126-1510915933:145359..145410TCONS_00047351-exon-scaffold_126-1510915933:145359..145410Clytia hemisphaericaexon
TCONS_00047351-exon-scaffold_126-1510915933:144671..144817TCONS_00047351-exon-scaffold_126-1510915933:144671..144817Clytia hemisphaericaexon
TCONS_00047351-exon-scaffold_126-1510915933:144298..144399TCONS_00047351-exon-scaffold_126-1510915933:144298..144399Clytia hemisphaericaexon
TCONS_00047351-exon-scaffold_126-1510915933:143718..143901TCONS_00047351-exon-scaffold_126-1510915933:143718..143901Clytia hemisphaericaexon
TCONS_00047351-exon-scaffold_126-1510915933:142696..142977TCONS_00047351-exon-scaffold_126-1510915933:142696..142977Clytia hemisphaericaexon
TCONS_00047351-exon-scaffold_126-1510915933:140283..140328TCONS_00047351-exon-scaffold_126-1510915933:140283..140328Clytia hemisphaericaexon
TCONS_00047351-exon-scaffold_126-1491911889:145790..145908TCONS_00047351-exon-scaffold_126-1491911889:145790..145908Clytia hemisphaericaexon
TCONS_00047351-exon-scaffold_126-1491911889:145359..145410TCONS_00047351-exon-scaffold_126-1491911889:145359..145410Clytia hemisphaericaexon
TCONS_00047351-exon-scaffold_126-1491911889:144671..144817TCONS_00047351-exon-scaffold_126-1491911889:144671..144817Clytia hemisphaericaexon
TCONS_00047351-exon-scaffold_126-1491911889:144298..144399TCONS_00047351-exon-scaffold_126-1491911889:144298..144399Clytia hemisphaericaexon
TCONS_00047351-exon-scaffold_126-1491911889:143718..143901TCONS_00047351-exon-scaffold_126-1491911889:143718..143901Clytia hemisphaericaexon
TCONS_00047351-exon-scaffold_126-1491911889:142696..142977TCONS_00047351-exon-scaffold_126-1491911889:142696..142977Clytia hemisphaericaexon
TCONS_00047351-exon-scaffold_126-1491911889:140283..140328TCONS_00047351-exon-scaffold_126-1491911889:140283..140328Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_126supercontigscaffold_126:140283..145908 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	1.21274e-09	0	0.57656	0	0	0	0	0	0	0	0	29.7042	30.8281	1406.5	1608.58	210.187	229.561	869.843	929.572	107.594	106.832	1046.92	862.293	738.436	874.699	50.5943	63.0711	4817.13	6155.62
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR007084BRICHOS_dom
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00047351 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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