XLOC_006799 (gene) - C. hemisphaerica

Overview
NameXLOC_006799
Unique NameXLOC_006799
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000137:119894..123322+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_006799 ID=XLOC_006799|Name=XLOC_006799|organism=Clytia hemisphaerica|type=gene|length=3429bp|location=Sequence derived from alignment at sc0000137:119894..123322+ (Clytia hemisphaerica)
aagtgctttgactaaaaaaatcgagcgaccacctcaaaaaacaaacaaat
ttccCCTTACTAATAGTAAAAAGTGCCCTTTGTTTTGAAGTagccagtca
ttttcttgacaaaatgACACTattggacaaaaatattgacatggtcatta
agtatgatgtCTGTAAGCTTTGTTACGCCAAATGTTTTAATTATGCTGAA
CTTTTCGGAAAGAATTGGGAAGGCAAGTTTTAGAGATATGcatctaatca
attattctattgtctttatgctgacaaaatgactaattttgaCAGAAATA
ACGATCTGATGATTAAATTACAAAGCTTAtcaaaccaatttcaaaaaaat
tttgttacgCTAAGTTCTTGTTGCAGCACAGTTTCGTCTTTGTGATCTCA
AGTTGATGATGTATGTGTTTTTGATAACTGCCAAATGTGATAAATCTAGT
AAACTTAAAACCCTGGGCTTCAGATTTTGGGGACTAAGATATAAATTTTT
CATGTCCTGATTTAGAGTGCAAAAGGCCCGGAAGAacaattgaaatttta
atagtttatttcaatttctaaaaaagtgttTATACAGTAGTATAAATAGT
AATGGGAGATACACTTGACTTCACAGATGTTTATGCTATTGTTCGAGGTG
CATTGGTAAGCCATTTTTGTGTAATTTAATACAACTTTGAAATTAGttct
tttatgaattttttctttatttatcaGCAGTACAAACATTTTATGTAAGA
CATATTTAAGATCTCAAAATAATTGCTGCAATTATTTTGAGTTAAGCTTG
AAAAGAAAAAGCTCTTAATTTGAGTCTCAGCATGTCCTTTAAATCAGAGT
AATAATTGTAAAGCTCaaatcttttgattgttttcttaTAGAGTGCTGGT
CGCCTGAAATTGAATAAAACAGGTATtgtttttaagtctaaaaaGACAGG
AAGGGTCGATTCTGTGCCAATAGCAGATATAGAATCAACAAAATGGATGA
GAGTGGCACGCGGTTTCGGGCtcaaaattgcattgaaaaatggTCAATTC
TATAAATACGATGGTTTTAAAGAAGCAGTAAGTGATATCTATCTTTTTGA
GTAGCAATAGCTTGATTACTGAGTTGAGTACACATACCATATTTTACTTC
ATGTCGTAATCTGGTCTACTGAATTAAGATGAGTCTGATAAGGTTTATAT
TATCCCTTCATCTTGATTCTCTTTACAGCCATCAGAAggctttctttatt
ttttactcCAGCGTGTGTTTATTTTTTAGGAATATCAAAAGCTAAAAGAG
TTTTACAGGAAGCACTACGATACCGAACTTGAAGAACAAGAATTATGTGT
CAAAGGTTGGAATTGGGGAACTCCCAAATTTGACGGTATGTAAACTGATG
TAAACAATCCTTTACATTTTCCAATCCATATGACCTAAACCATTAGGTTT
CTTTTTTGCATAATAATTCACACAATCCAATTCTTTAGCAATAATCAGTC
TGGAATAtactaaattttatttcaataaaaagatgtaaaagGTTTTGTAA
TTTATTCTGTCAATCTTTTTTTAAGGTTCTATGATGTCATTTGAAGTGGA
CAACAAACCAGCTTTTGAGATTCCTTTAAAAGATGTCTCACAGGCTACAA
CAGGTACTGAGCATTACTATTAAAACATGAAGCTGAAAAAGTACTgcaag
ttggtctaatgtcgacaccccttttttaatttcgacacccttctttaaag
gAAGGAATGATCAGAAGGTTTGggtcactgatagacaaaagacTTTTCCA
ATCTAGCTATCAGAAGCAAGGGaaaatagtttccatcagcaattccgacc
ttcctattattcctatctgtaaagaatagtagggggaattttgttcgatt
ttttggaatcgcttgactgttttgttagaagcacttgttatacatttttg
gaaagctaaggggtaNTTGTcttctttttaacaaaaattaacATATAAAG
GTTTTAAAGCACTTCCATAACGAGCACTGTGCTGCACTGTGTACTTTTAG
AGGAAAAACAGAAGAGacctgatttttttataaatatttctaGACATTCT
TCATTTTCTCACCAAAACAGCTGTGAACTTCCATCGAACACTTTCTGCGT
AAAggataaaaaaaacttgaaaatttgtcTATTTATAGATTGAAATCTCT
CTTTTCATTCAGGAATTCCACGAAAAAATCACTGCCAAGGCTGATCTGAT
CCAAGCTACTGGAGATNagacaaatatgacggtctcaggcaaaattcata
gggttaaaaattaatgacaaTTTCAGCTCGaaaaaacggagacctgttgt
atatttttggaaagctctcaaaaaattaagattagagatatattgcaagt
ataggtgatttctgtacctaactcgNCTCTTTTCATTCAGGAATTCCACG
AAAAAATCACTGCCAAGGCTGATCTGATCCAAGCTACTGGAGATGCTATC
GTTACTTTCGAAGAAGTTGCATGTCTGACACCAAGAGGTCGTTATGCGAT
TCGTGTCTACCCGACATTCTTACAACTGCATGGTAAAACGTACGATTATA
AGATTCCACACACGACAGTTTTGAGGTTGTTCCTGTTACCACATCAAGAC
AACCGATTTATGTTCTTCGTGGTAAGCTTGATGACTTTCTTTATTTGCCG
CAATTAGCGAGTTAACGTATTCCTAATAAACCGAAGGAGATgttataaag
caaagttgacatgtagCCAACATTTAGTCCACTTTGCTctacgacggtaa
aaacaccaaaataacatcatctgtttaggtgagcaaagacgatatagagc
cgtacatcaactatcgactttgtttttcgtcgacttaccgtcgccctcga
tatcctccgatacttACTCACTATTCTTTTATGGGGTAGAAATTGATGCC
TTTTGATACCTCCGAATGGGNtcttctaacaaaacagtcgagcgatttta
caaaatgccctctactagaagggtgtcgaaattagaagaagGATGAAGGC
ATTAGACTTACAGTATTGTCAAGTATAAGAAGATCGACAATATTATATTA
CCACGTTTTGACCATTTGAACACTATTTTTCAcctcaaatttaaaataaa
gttGCAGATCTTTGGGAGGGGATTGACATCATTGCTATTATTTTTTACCC
TTCTATGCTACTAGGAGTAACActgttttgtattttaaaatttattatta
tcATAGTTCAGGTAGGGAGGGAGCTAATCCTACATTTACTAAAAATTGTT
ACTGAAAATActtttaattttaaataaaaactttgtGTATTAATTTCTTT
ACTGACtttgaaaatcaacaaattgAATGGTTAACTTCTATGACAGGTAA
AAATGAAGTGACGATTGAATTTCACAGNT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00012088TCONS_00012088Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00012088-proteinTCONS_00012088-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000137supercontigsc0000137:119894..123322 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
82.57	81.06	116.32	111.51	24.24	20.35	32.34	36.57	24.04	25.11	23.75	19.08	21.67	24.88	24.65	27.22	28.7	29.3	7.76	10.92	20.29	19.6	24.66	24.89	38.81	43.35	12.45	9.91	14.57	15.88