XLOC_003587 (gene) - C. hemisphaerica

Overview
NameXLOC_003587
Unique NameXLOC_003587
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000066:742792..750445+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_003587 ID=XLOC_003587|Name=XLOC_003587|organism=Clytia hemisphaerica|type=gene|length=7654bp|location=Sequence derived from alignment at sc0000066:742792..750445+ (Clytia hemisphaerica)
TATATTCATTCTTGATGGAGGTTCATTTGAGTCCTGAAAAAACTGTGCAA CGAAGATTGGAGGGACAAGGGAACGGATTCTTTTGGATTTTTACCTAATC TCAGACTAAAAGAAGAAAGTATGTTaggttttttttaactgatatgtTCT AGTACGTTAAGTCCCTTTCAAGATGAAACCATCCCCTTTTTAAAATCCCC CTTTCTTCacgtttttatttgtttcatcTTCAGGGATTTAAGATCACCCT ATAAATAGCTTacttcatcaaaaaaaaaaataataataataatacaacAC AATGGCAACTGCAGTCGAACAATTAGGCAAGGAACctacaatcaaaacaa aatctgCTCAAATCAAGACACTCATCCACAAACAGATCATTGGTAAGTTG GATACATTCTCTGCTGCTTAagactaaaaaaaaaacagcataAAAACACG CATTTTAGGGGTCAATCAGTTGAGCACtttctttgatatcttttgaatgG AATTTTTTATCACAGTGTTGCTGATCTACGATTTCAAGtttcatttttgt gaaaatagtAATTATAGCGTATATATAGTAGTATTGTGCTGTGATCCTCA GCTCCACTGAGGCCTAGTCCTATATTATAGGAAggtatatattatattat agtAATTATAGCGCTATTCTacaagaatttcatttttttctttttccttt tccttcacttttttgaacgaaattgaaaaacaaactaGTGGAAATATAAG CGCatttaaatatcttttcaacgatacCAACCTTTTTATTATACGACAAA TGCTCAAAAATTTATGGCTAAAAAATAAAGACACCACACACCTTTTTGAC ACAGATATAAATactcaaaagttttaaaaacaggaAAATAAAGAATATTA GTTTCCTTAAGCCAGGTCCCTAAAAACTTGATGTGTGCGATTTCGCCGAA ATGTTGAATTGTTAGTTTgttgacttttttatttcagatatTTTTAACAA GGATCCCATAATACCATAACATTGACGTCCTCAAAATTAACTGGGTGAAA ATTGACAATTGTCTCTTAGTGTATTGTTGACCATGATTATTTACTTTCCA CAGACGTTGGGGAGGATGTGTTTAAACGAACCAGTGAGAGACAACAGCAA TTATTCGATGATTATCTCCTCAAACACGAATCAAATCTTCTCCAAAAACT cgatcaacaaaaacaaaaagctttGAACGACCAGCGACAAAAACACCATG CAGATCtcaaaagaatcaaagatgaataTTTGAAACTGCAGGTAAATCTT CTAAATCCATCGAGTTTCAATATGCTAGTGAAGAAAGCAAGGAAAGTCTC ACATCTTTTTATGTATTTCACAGCTCTTGAAAGTGTCATGTTCTTCATTT TGAAAGCTTGAAATCATAATTTTGTCAGATTTTCttatcatgtttttgat gatttataAGCCTGTGATTTTTGTTCCTTAAATTCTGTTCTCATTGAAAT TTATGGTTCAATCTGTGTTTGAAATAGGAGGCGGCAATCAAAGAGCAAGG AAAACGCGTAGAGAAACTGATGAATGAAAGAACTGATCGTTTACTGGAGA AAAAACAACTCGATGGTCAACGCAGACTTGATGAAGCCCTGGTAGAAGCG AGGGAAAAATTCAACAGTGAAAAGAAGGAATGTATAGACAACCTGATTCG AAAACTTCAAAAGGAATTCGATCAGAGGATGAAAGAAGAGCAAAATCTTC ACAAGGAGAACGTCCGAACTTTAAACGGTGAATGGAAAACTAAACTGCAG GTATTTGAAATGATCTCTGTTCAtcgtttatatattttttttcatgcaGG TATGGAGGGTTAAAACAGAAAAGTTTGTCCTATCTGATACATCACCAGGG AGAACAGCCCAATTTTCCATTAATATTTCTGTAACATCTTTAGTCGATAA AAGAGGGTGGGGTACGTAGGTAAAAATAGGTGCCAACGATAAGGGTCGGT CTTTTAGCTTTTAAAGTCGGTAACAAAGTAACGGTTGCAAAAACAAGTCA AAATACTTTAAGtttacaaactttcgcgagcagaaaccttcgcgaggtcg aaaaatcgcaaaatttgcgacatttactttcgcgaatttgagaaaaaagt gtttttcgctagcataaactttcgcgaatcgttagataaaaatgagaatt tttgaataaaaattgccttaaaagtgaaaaatattccttaaatcagctaa agacggttgctcttcaactttaaaaaggcattaaatgataacaatatgcc gaaaatttgatatttattatgatttcgaggttttatagtttttcaattat tttgagattttttcgcgagcataaactttcgcgaattgccctgataagaa ttttcaaagccATGTACTTTGGCGAAAAAGGCTAAagttcgcgaaaatcg cgaaagtttctgctcgcgaaagtttgtacgcctaaagtagtctGTAGGGA TCCCCCTTTTGGTTCTTTTTAAGGACCATGAAAAGTCAAtaaaatctctc taagggtaggagGTCCCCGCAGTGGTAATACTggtcacgatatcacgcaa atttttgtcttcaagcACAATCAcacaaatcagcaaaaaaattggataat tcaattcaattcaaaaatgatttatttgcctgcataatttaaactaaaat ttacaatatGTGAAAAAATTACAATATAATTAGGTTGGGGAGCAGGCCAG GCTCTGACCATCCATATAGAGGTTACCCGACTAATCAATGGGGTGACTAC CTGGTTGCAAGTATATGTTTGGGATTTTAATAATAGGGGAGGGATTATTA CACAACAACACATAAAAGTACCGATAGAACAAAAAAGATATTTAACAATT AGAactgtaaaaatgaaaaataaaattttaatcaatttttcaaataagtc tcaacttaaaaaaaggaaagtttCTCAAAGTTGATGAAGTACAGGTAAGG ACATAATCAGAGTTAGCTGTGTAGGAGATTATCGGCTCTTTTGTTAAGCA GATACAGAGACAGTGAACTTAGGTCTTCTTTTGAGTGCAATATTAGTTGG TTCCAATTTAATATCGATTGGTATTTTACGGACTTTAAGCCATAGTTCAA GGTGTTAGCTTTGGGACGTTCTAGGAGCTTCAGgttcatttttcttgttt gatatGCATGAGAAAAGACTTTGAAATCAAAGGATTCCTGTAGTGCTGGT GGAGAGATTTTGTTAATAGTTTGGTGTACAAGTTTGATGTTACACTTGAA CACAGTTTGAGCGATTGTAGGTATACCAGTGTTTTCAAAAAGTTGAGAGG TTTCAGCGTCAAAGTTAGAAAAAGCGAGGATGCGAAGACATCGTTTTTGG AGTCGGCCAATTCTTGAGTTTTGAGTCAATCCTTGGCCCCAGACAATCTT TGCGTAGAGCATAGTAAAGAGTTTTTATGACAGAAACAGGAACAAAATAA CGAAGCTTAGCAAGTATACCATTTGCCATGCCAAGTTCTTTTGCTAGATG GTCAAAATGAGAGTTCCAGGTTAGAAATTCATCGAGAAATAGCCCAAGGT GTTTTACGCAAGTTGAGAGTTTAAGTTCGAAGTCATCGAGCTTTAACTTC ATTGAATAGGGAACGGGCTTAAATGTCTGCTACGGAAGAGCAACACTTCT GTTTTCAATACATTGAGTGAGATTTTATTCGCTCGGAGCCAAGAGGAGAG TCGTGCAAGGTCAGAATTGACTTTGGTTTCTAGAGACTGAAGGTCAGAAT CAGAGGAGAGGAGACAggtatcatcagcaaaaagATTCGTTTGACTATTT TGAAGAACATAATGAAGATCATTAATATAGATGAGAAAGAGAATAGGTCC AAGGACAGATCCTTGAGGGACTCCGTGATTAACAGGGCGTTTAAAAGAGT CCACGCCAGAAACAGAGACGTATTGTTGTCGGTCTGTAAGATATGAACGA AACCATTGATTAGATAAACCCCTCACACCATAATGTTTAAGTTTAGACAG TAGTATTTCATGGTCGACCGTGTCAAAAGCTTTTTGCAAGTCGATGAATA CCCCGCAAGAGTAAAGTCCTTTGTCTATGTTNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCAAGAA AAGAGACTAAtctaaattttattattttttcgaataTCTTATCGATGTTT GATAGTAGAGATATTGGGCGATAATTATTAACATCATGAGCGGAGCCCTT ATGTTTAAAAATTGGAATTACTTTAGCCGTCTTGAGAGGAGTGAAGAATT TACCTGTCTGTAGCGAGTTATTGAAAAGCTTTGAGATGATTTCTGACACC TCTGctaaaacagtttttaatactTTAGAGGGTATGCTATAAGGACCGTC AGCTTTAGGTTTAAGATTCAAATTTAAGATTTAGGTTTAATCACGCACCC CTTTGAAAATGtccaaatcacgtatcacggttcaaaattttttgaaagca cgatcacgttttgatcAGGAGGGAGCAGAatcacgaaaaaaaattgcaaa tcacgtaatcacgctgcagaaaaaagtccctatcacgtcatcacgcaAAC CGTTTGGGGGCCTCGGTTAGGAAATTTTACGAAATAAATTATTTCTCTAG GGGTCACTTTTTCGCTAAAActtctctctaagggttacttTTCGGAGGTC CAGTCCGCATATACTCGACATTCTCCAACCCCAGTACCCCCTACCGGAAA ATGTACAGAATTTGCAAGTAAGCAGCTGACGTCATTATATATGGCGTGCT TTACTTGCTTGATGTGAAATCGGCTCTAATGTATGTGTTTTAATAAGGTC TTCTGATTTATTTTGGTTCAGAAAAACAATGAGGATAACGCAGTGAAGCT GTTGGATGAGCTGGAAAAACAACGCTTAGAACTTGATGAATATCACGTCA AAGAGACCAAACGACAGATGGACGCTCTTGAAACACTTCACCAAGGAGAA TTAGCGGATTGCGAGAAAGACATTcaagaaaagaagaaggaaaacgAGGA GTTGTCAGAAGAAATCGTGAAACTGAAAGGTGATTTAGGAGAGATGAAAC ATTCTATGAGACTTGTTATGGAGACGTTTCGTGATTTCATCGAATCTTGT GAAGGTTTTGGTGAAGGACAAGCAGACTTTGTACTGGATCATCTGATACc ccaaaaaattgaagaatttctAAGAAATTAATCTCTTGGTGTTTCTTCGC TCtgatttgaatttcaattattGAACGTGTGTTGTGTAAATAAAATGAGa ctgactttttatttttttatatctgATAAATTTGACATACTGTACATAAC CAAAGTATAATAAGTGTGATTTTACGAATAAATTAATGATCAAACcttat tatttgatttttttaacatcTTAAGGCCCCTTCATCATCGATTGCACCAG GAAAATCTCCTGCTTCGAATTTTTGGAAAGCACTTTTGTGAGCACAAGCA AATTATCAGTTGTTAAGCGTTTGACTAACGattgttcgtgacgtaatttg tAACAAAgccttttctaaaaaaactaacCAATTGTCTTTCATTTTAGTTC GTACAATAACACATGAACAACATGAATTATGATAGTACTGCACTGCTCCA AGAATCTTGCAAAAGGTCTCCATTATATGaagttcaaaatattaaaattt accGAAGAATTTGTATTCCACGGTATAGACCGGCTGTTACCCAGTAGCGT AGACTAGAGgagcgcaaaatttgtgtaggagaacaGATTTTTATGCCAca gtaaatatctttttatctcATGTATGGATGATTTGCTCTCcttcacaaat tttgcgcccctttTGTCTACGCTATTGGCTGGCGTCAATCTTCCCAAGTA AGAATGCagacaaaataattatttttccgCATTATTGTCGTGATTTTAAA AGGATCCATTAtacacaaaaaaaaatacaaactcgGGTAATAATCTATAT ACTACTACTATACTAACTGTTTATACGGACAATAACGTAAGATATTGACC TCTGTCAAACACGTATTACCCCCGTGCGTAAATAGTTGGGTTagtaatat ttttcaattttgtttttatcttggaCAAGAATCAATCCTTTCTTCTACAG ATAGTGATATATATTGCATTTTATATGGCTTGTTGGAGAAGCAGCAATTA AATGTCCcaagaaaatagcaaagtaaACCATACAAGCAACGTCTCACTTT TTCATGTCGTTTTTGAATAGGTTGCAGTTGAGTCATTGTTCTTCACACGT TTGATGCCAAACATTTTACGAAAACCTCTTCGGATTTCAGGATTCTTCAC GTAATAGATGATGGGATTGATACATGAGTTCCAAGAAACTGTTATCATGG CAACCACGTAGAGGTTTTGGATGTTGAACGCTGAGATGAAAGGGTTGAGA ATGTTCGCCAGATTCAAGATCAACCATAAAAGCAAAGGTGTGATGCAACA AAAATACGCGAGAAGGAGGAAGGTGACTTGTTTTGCCAGCTTGAGGTGAG TTTTTTGGCTCTTTTGTTGTCGTTTGTTGTCATGTGTTTGGTCCTCTGCT GGAGGATTTGATGCACTTTTAGTTCCCTCTGATGACGCACCACCTTCGTC TTGttgtaatttcattttcaaggaGTCGACGAAATGTCGTTTGAGAGCAG CTTCCTGTTTTTTGACAACACTAGTGATAAGGAAGTAGCTTGAACACAAT ACAATGAAAGGGAGGATGAAAATAGTTATCACAACTCCCAGATATGGTAC ACTCCCGATGAACCGTAAGAAAGGAGTGACAGCTGGTATCACCCATGACA ACAACACCAGCAACACCATCAACCATTTGGTTGACCTTCGGTGATAGATT TTCATTTTGGTCATCAGAATGTAACGGTCGAGTGAAATGACAGCAAGTGT CAAACACGACGAGCCTTGAAGCATTAGGGAGAAAAAGGCACGAACGAAGT CAACATCACAATTCTCCAGAGATTCGTAATTCAACACTTGGTATGCGGTC ATCGGGAAAACGATGACACCAACCAGGAAATCGGAGATAGCGAGCAAAAT GAGGATTTTGTTGGACCTTGATCGACAATCAGGAAGAGAGAGGATTCTCA AAACAATCGCGTTAGTGAGTGTGGCCAAGATGGATCCAACGATGAAGAAA ACACTGTAAACAATTGTCATCGGAGGCCGAAGGATGGACATTCGAACCTT ACAaaccatttttatttattttatgctTTATATTAAGATGATTTGATGAT GGGACTTGCTGATGATGTTCGGTTTCGGTTTGTTGTCAACAATTTTGCTC ACCGGGCGTTCTGGTTTATCTGTTTGCTTATTGTTTTGTGATGATCGTca ccttaaaacaaaagaaaagaacgttatTGTGAATAACAACATAATAAACA TCGC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00006279TCONS_00006279Clytia hemisphaericatranscript
TCONS_00006280TCONS_00006280Clytia hemisphaericatranscript
TCONS_00006281TCONS_00006281Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000066supercontigsc0000066:742792..750445 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
46.93 41.12 99 122.88 190.14 144.64 66.9 65.48 40.01 38.92 44.73 72.31 17.34 23.99 20.05 19.7 9.54 13.73 32.58 25 14.29 15.24 19.4 19.15 230.26 165.73 12.11 18.01 6.18 6.39