|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00006281 ID=TCONS_00006281|Name=TCONS_00006281|organism=Clytia hemisphaerica|type=transcript|length=1525bp
CATTATTGTCGTGATTTTAAAAGGATCCATTAtacacaaaaaaaaataca
aactcgGGTAATAATCTATATACTACTACTATACTAACTGTTTATACGGA
CAATAACGTAAGATATTGACCTCTGTCAAACACGTATTACCCCCGTGCGT
AAATAGTTGGGTTagtaatatttttcaattttgtttttatcttggaCAAG
AATCAATCCTTTCTTCTACAGATAGTGATATATATTGCATTTTATATGGC
TTGTTGGAGAAGCAGCAATTAAATGTCCcaagaaaatagcaaagtaaACC
ATACAAGCAACGTCTCACTTTTTCATGTCGTTTTTGAATAGGTTGCAGTT
GAGTCATTGTTCTTCACACGTTTGATGCCAAACATTTTACGAAAACCTCT
TCGGATTTCAGGATTCTTCACGTAATAGATGATGGGATTGATACATGAGT
TCCAAGAAACTGTTATCATGGCAACCACGTAGAGGTTTTGGATGTTGAAC
GCTGAGATGAAAGGGTTGAGAATGTTCGCCAGATTCAAGATCAACCATAA
AAGCAAAGGTGTGATGCAACAAAAATACGCGAGAAGGAGGAAGGTGACTT
GTTTTGCCAGCTTGAGGTGAGTTTTTTGGCTCTTTTGTTGTCGTTTGTTG
TCATGTGTTTGGTCCTCTGCTGGAGGATTTGATGCACTTTTAGTTCCCTC
TGATGACGCACCACCTTCGTCTTGttgtaatttcattttcaaggaGTCGA
CGAAATGTCGTTTGAGAGCAGCTTCCTGTTTTTTGACAACACTAGTGATA
AGGAAGTAGCTTGAACACAATACAATGAAAGGGAGGATGAAAATAGTTAT
CACAACTCCCAGATATGGTACACTCCCGATGAACCGTAAGAAAGGAGTGA
CAGCTGGTATCACCCATGACAACAACACCAGCAACACCATCAACCATTTG
GTTGACCTTCGGTGATAGATTTTCATTTTGGTCATCAGAATGTAACGGTC
GAGTGAAATGACAGCAAGTGTCAAACACGACGAGCCTTGAAGCATTAGGG
AGAAAAAGGCACGAACGAAGTCAACATCACAATTCTCCAGAGATTCGTAA
TTCAACACTTGGTATGCGGTCATCGGGAAAACGATGACACCAACCAGGAA
ATCGGAGATAGCGAGCAAAATGAGGATTTTGTTGGACCTTGATCGACAAT
CAGGAAGAGAGAGGATTCTCAAAACAATCGCGTTAGTGAGTGTGGCCAAG
ATGGATCCAACGATGAAGAAAACACTGTAAACAATTGTCATCGGAGGCCG
AAGGATGGACATTCGAACCTTACAaaccatttttatttattttatgctTT
ATATTAAGATGATTTGATGATGGGACTTGCTGATGATGTTCGGTTTCGGT
TTGTTGTCAACAATTTTGCTCACCGGGCGTTCTGGTTTATCTGTTTGCTT
ATTGTTTTGTGATGATCGTcaccttaaaacaaaagaaaagaacgttatTG
TGAATAACAACATAATAAACATCGC Run BLAST on NCBI transcript from alignment at sc0000066:748921..750445+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00006281 ID=TCONS_00006281|Name=TCONS_00006281|organism=Clytia hemisphaerica|type=transcript|length=1525bp|location=Sequence derived from alignment at sc0000066:748921..750445+ (Clytia hemisphaerica)
CATTATTGTCGTGATTTTAAAAGGATCCATTAtacacaaaaaaaaataca
aactcgGGTAATAATCTATATACTACTACTATACTAACTGTTTATACGGA
CAATAACGTAAGATATTGACCTCTGTCAAACACGTATTACCCCCGTGCGT
AAATAGTTGGGTTagtaatatttttcaattttgtttttatcttggaCAAG
AATCAATCCTTTCTTCTACAGATAGTGATATATATTGCATTTTATATGGC
TTGTTGGAGAAGCAGCAATTAAATGTCCcaagaaaatagcaaagtaaACC
ATACAAGCAACGTCTCACTTTTTCATGTCGTTTTTGAATAGGTTGCAGTT
GAGTCATTGTTCTTCACACGTTTGATGCCAAACATTTTACGAAAACCTCT
TCGGATTTCAGGATTCTTCACGTAATAGATGATGGGATTGATACATGAGT
TCCAAGAAACTGTTATCATGGCAACCACGTAGAGGTTTTGGATGTTGAAC
GCTGAGATGAAAGGGTTGAGAATGTTCGCCAGATTCAAGATCAACCATAA
AAGCAAAGGTGTGATGCAACAAAAATACGCGAGAAGGAGGAAGGTGACTT
GTTTTGCCAGCTTGAGGTGAGTTTTTTGGCTCTTTTGTTGTCGTTTGTTG
TCATGTGTTTGGTCCTCTGCTGGAGGATTTGATGCACTTTTAGTTCCCTC
TGATGACGCACCACCTTCGTCTTGttgtaatttcattttcaaggaGTCGA
CGAAATGTCGTTTGAGAGCAGCTTCCTGTTTTTTGACAACACTAGTGATA
AGGAAGTAGCTTGAACACAATACAATGAAAGGGAGGATGAAAATAGTTAT
CACAACTCCCAGATATGGTACACTCCCGATGAACCGTAAGAAAGGAGTGA
CAGCTGGTATCACCCATGACAACAACACCAGCAACACCATCAACCATTTG
GTTGACCTTCGGTGATAGATTTTCATTTTGGTCATCAGAATGTAACGGTC
GAGTGAAATGACAGCAAGTGTCAAACACGACGAGCCTTGAAGCATTAGGG
AGAAAAAGGCACGAACGAAGTCAACATCACAATTCTCCAGAGATTCGTAA
TTCAACACTTGGTATGCGGTCATCGGGAAAACGATGACACCAACCAGGAA
ATCGGAGATAGCGAGCAAAATGAGGATTTTGTTGGACCTTGATCGACAAT
CAGGAAGAGAGAGGATTCTCAAAACAATCGCGTTAGTGAGTGTGGCCAAG
ATGGATCCAACGATGAAGAAAACACTGTAAACAATTGTCATCGGAGGCCG
AAGGATGGACATTCGAACCTTACAaaccatttttatttattttatgctTT
ATATTAAGATGATTTGATGATGGGACTTGCTGATGATGTTCGGTTTCGGT
TTGTTGTCAACAATTTTGCTCACCGGGCGTTCTGGTTTATCTGTTTGCTT
ATTGTTTTGTGATGATCGTcaccttaaaacaaaagaaaagaacgttatTG
TGAATAACAACATAATAAACATCGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00006281-exon-sc0000066-1491911889:748921..750445 | TCONS_00006281-exon-sc0000066-1491911889:748921..750445 | Clytia hemisphaerica | exon |
| TCONS_00006281-exon-sc0000066-1510915933:748921..750445 | TCONS_00006281-exon-sc0000066-1510915933:748921..750445 | Clytia hemisphaerica | exon |
| TCONS_00006281-exon-sc0000066-1575043694:748921..750445 | TCONS_00006281-exon-sc0000066-1575043694:748921..750445 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000066 | supercontig | sc0000066:748921..750445 + |
Blast
The following BLAST results are available for this feature:
|
