TCONS_00010957 (transcript) - C. hemisphaerica

Overview
NameTCONS_00010957
Unique NameTCONS_00010957
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1475

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00010957 ID=TCONS_00010957|Name=TCONS_00010957|organism=Clytia hemisphaerica|type=transcript|length=1475bp
CTTAAACAATACATCTTTAATTAACTTTAATGTTTTAgataaagaaattt
aaaagatATCACATTGATATGATGGCAAGCTTGACCTGGAAGAAATCAAG
GAAAAATGTCTCTTCTTCTGCTGCCAAACTCtttcaaaatgaagatgaag
aagaaaatgaagaagaaattatAGAAGATTGGAGAGATATTGTTCCATCA
AAAAAGAGTAAAGTAATGTTGGAAGATGGTGTCCAGAAAAGTAAACGTCT
AGTCAATGATGCAACCCAACTTGCAGACGAAGAGAGGTATTGGGAAGCAT
TGCAAAAATTTGATGAGGCTTTATCATTCACACCTCTTAATGAAAAGATA
CACGAAATGAAAGCACAGaTTCTTCTAGAACTTGGAGAAATTTTCCCAGC
AGTACAAGCTGCTGAGCAAGTTGTCAAATTGAATCCAACATGGGCTGAAG
GTTTCCAAACATTGGGTAGAACACAGATTAGCATTGGAGAAATTGATATG
GCGCTGAAAAATTTTTGTCGAGCTTATCATCTGAATCCTACACTTGACGA
TCTATTCGAAGAAGACATCAAATGGGCAAGAGAACTTCTCAAACAGAaag
aagaaatgaagaaaactgAAGAATCAAAAGAAACTGAACGTAGTAAtggt
gaagaagaaaaatgcgCTAAATGTCACCGATGTTTCAAAGTCAATGAGAA
AGCCTTGTCCATGAATGGTAACGAAGAAAAGAGAACAGAAGATGAGATAC
CAAAAACATGAATGAGCGAAATCACTGATGATCAACTCGAAGAATTGAGA
GACGCTTTCACACTTTTCGACAAAAAAGGCGACGATAAAGTCGAGTTTAG
TCAAATCATCGACGTCTTGCGATCACTCAAACTCAACCCACTCACGACAG
ATGTCGAAAAAGTCATCAAAGATTCCGGCTTAGAAGGCACCCGTGTCGAC
TTCGCTACTTTCGCTAGCATTTACGAGCAATTCAAGAAACGGCCATCAAT
CGCTAACCGTGATGATTTAATCGAAATGTTCAAAACGTTCGATCGTGACA
GTTCAAAGACCGTCTTTGGAGGTGAATTCAGACAAATTTTACTCAATATG
GGTGATAAAATGAGTGAGCCAGAAATCGATACTATGGTTTCACCCAGTGA
AAATGCAGAAGGCTACATCCCTTACGAAACTCTCTTGGATTTCGTTATGT
CAAAATAAATTAATATCGACTTAACTAGATTAGAAATAACATCTGAATTC
TCATTCAAAAAGGGACAATTTCATAAACTTTCAAAGAACAAAAGGACTAC
TCTTCTGgagttgaaattttttgtttaaagctattttattttcatcaaat
ttatgcaaaaatattgTAATTTTATTATACCAATATTATATTTTGTTGTA
AGATAGGCCACTGATAAATTTGTGGAAAAGAAAACTAGAGCTGAGTTTCA
ACAGAGGCTAACAtctgttaaaatt
Run BLAST on NCBI

protein sequence of TCONS_00010957-protein

>TCONS_00010957-protein ID=TCONS_00010957-protein|Name=TCONS_00010957-protein|organism=Clytia hemisphaerica|type=polypeptide|length=230bp
MMASLTWKKSRKNVSSSAAKLFQNEDEEENEEEIIEDWRDIVPSKKSKVM
LEDGVQKSKRLVNDATQLADEERYWEALQKFDEALSFTPLNEKIHEMKAQ
ILLELGEIFPAVQAAEQVVKLNPTWAEGFQTLGRTQISIGEIDMALKNFC
RAYHLNPTLDDLFEEDIKWARELLKQKEEMKKTEESKETERSNGEEEKCA
KCHRCFKVNEKALSMNGNEEKRTEDEIPKT
Run BLAST on NCBI

transcript from alignment at sc0000119:191781..199157+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00010957 ID=TCONS_00010957|Name=TCONS_00010957|organism=Clytia hemisphaerica|type=transcript|length=7377bp|location=Sequence derived from alignment at sc0000119:191781..199157+ (Clytia hemisphaerica)
CTTAAACAATACATCTTTAATTAACTTTAATGTTTTAgataaagaaattt
aaaagatATCACATTGATATGATGGCAAGCTTGACCTGGAAGAAATCAAG
GAAAAATGTCTCTTCTTCTGCTGCCAAACTCtttcaaaatgaagatgaag
aagaaaatgaagaagaaattatAGAAGATTGGAGAGATATTGTTCCATCA
AAAAAGAGTAAAGTAATGTTGGAAGATGGTGTCCAGAAAAGTAAACGTCT
AGTCAATGATGCAACCCAACTTGCAGACGAAGAGAGGTGGGTTTATAGCC
ATAAGTTTTGTATTTTAAATACCCCATGTCCTATTTCAATATAATCAACT
TGATCGTTCACTGTGGCTTTTTATTTCAATCCCCTAGTGATAATAGTTAT
TTGCCATCATAGATTAAGTATTTGCTTTGCTTCCAGTAGTATTTCTGAAG
GATCATTTTAAAATCTATCTTTGATCCGGAGAATTTTAATTTTCTACAAA
ATAGGACATTTTCATCATCTAACATTATTTCTTTCTTTAGGTATTGGGAA
GCATTGCAAAAATTTGATGAGGCTTTATCATTCACACCTCTTAATGAAAA
GATACACGAAATGAAAGCACAGGTAATTCTTCAGTGATGTTTATTGTACT
GGGTGTTAGATTGAACAAGATAACATGTGACATGCTTAGATAGTTCAACT
AAGGCTTTAGTAAAGTGATGTGAATTATTCTTCCCTCGAAATCATTTCTC
ATTTTCTATCCGGTAGATATATAATCGACTTATCTTCACATAACTTACTA
TAATTTccttaagagccagtttttttttaaacagggCAGGtacaatagtt
tgaaacttactAAAACttagtaaaatcccaaaatattttgatcttaaaat
ccataatggcagatttatgccaatttgaagtttgAACAGGAACAAACTCC
CCTGGGACAGGTCAGGtggctctaaaatacccctaaaatcaaatacttag
tgtttttgtgacgtcttaactccagctaccattttgaaaatcttggtttt
tttgaaaattgtatagtTTGCCGaccatagtttcagaatcaccaAAAACC
AATCCCTCATTTTGATTCGAGAAAGTATGGTTCtctatcaaaacaaattt
taactggaatgcccaaaaatgtcaaaaacttcaaattggcataaatctgc
cattatggattttcagaccaaaataatTTGGTTTTATTCTATCTTCTATA
CTaattgagtttatgaaaaaactttgtaacgctagcccagtaacatatgt
taaAGCCATTGACtttttacatagttataatgtatgttgattcagcagat
tgaaataaatagaatcttttgtaatgaataaagaaaatgtggagcaagat
ttttttcttccttttatttacaaatttgaaaggactcttttattaaaatt
ttgctgacatcagtttcagacgagtcgggtgtatataacaccgtataatt
cctttaaggtttctaaaatttgaacgccgcggctggaaaacctatccacc
ttcgatacaaaaagtctcacgctaagtttgacaagcgtagaaaactcgga
ttagagaagactctacacggctatttgtaaacgaaaaaagttctgacgtc
aatttcatgcaaaagtactgcgacgtcacaaagtttcaaataaaaaggtg
tggcattttGTTGCACAATTTCGAATTATTTCATATCAACACAagcaaca
aaatccaacattgttgtttgatgattaaacttcgtctaacattatttaaa
aaggtttcaatgttggttgcattgcatatgcgccggtcttaagctgtccg
catgtgaagccaacaaacgggaaaaccttcagtgctcaatctcaaagcgc
gagcctctccttcacaactaaggctttttctttcctagaagcaatcctct
caccacctcagacacctttgggcgtctgcaacgacgggtaccctcgataa
ttttgacagggtcactatatggcatttcattgaacacaaacttccgttat
cttaaaaagacatatcatcgaggcttacagacacaaaattttgactaatg
tagaaagtttagatgtataatttttattattgtattcggcattttaagcc
aaaacgatgtcaggcATTAACctacattatagtattttaaaggcttttgt
tgtgcaaggaaaaccgttaaccggcgtttgcgacgacgggaaccgtctag
ttatATACTATTCTAttatatccaaaaatgaaaaaaaaactaagtttcaa
actattggatcTGCCCCAAACTGCCCCATTCTTAAAAAAGCTGACTCTTA
ATATCTGACTAATGCGCCTGGTGTAGTGAAGCATTGATACTCTGTAATGG
CAtactttaaatttaatttttaattgatGGATCAAGCGCtttaaatagta
tttttttatgatttttcagaTTCTTCTAGAACTTGGAGAAATTTTCCCAG
CAGTACAAGCTGCTGAGCAAGTTGTCAAATTGAATCCAACATGGGCTGAA
GGTTTCCAAACATTGGGTAGAACACAGATTAGCATTGGAGAAATTGATAT
GGTTTGTTTGTTCAACTTTTATGTTAACTTCCCCATGTCCAAGTTGTAAA
TTTGGTTGCTTTTGGATAAATGTTTACTCAAAACATTTCCAGTATAATAA
GACAACAACAGCAGTTTGACATTTGATAGGTGTATTTAAACCTTTTAATT
CAGTGTTGATTCCCCATCATCACTAACTCAAATAAATGATATGATATTTT
ACTTCTCAGGCGCTGAAAAATTTTTGTCGAGCTTATCATCTGAATCCTAC
ACTTGACGATGTGAGTCCAATTGTATTTAATTTATTCAACTTCTGCTAAT
ATCTTATTTTTCTCATAATGTCATGATTTACATAATTCCAAAGGGGGGGG
TCAATACACCCCCTAGTCTAGAGCAACCCCCAAGTCCAGGTCCAGTCCCC
TCTCAAAATTTTATGGAACCTCCGCCCCCACCTCAAAATTAGGGTGTCAT
TGGGTTTTCCCCCACTTTCAAGACATTATGCACCACTCATATTAACTAAA
ATAAAAGCATATTCACTCTTTAAAAGTGTTGCTTTTGAGTCAATTCATTA
GTATCAATCAATTCAAGAAATTGGTTGAAATACATTTCAAGCGAAgcgag
aaagaaaattttaaggattttaaccCAGTCCAAGACTGCAAAACGAGATA
TTTGGAAAGATGGCTTCAAAGAACTTTGCCAACGCATTAATCCATCCTTT
CTTCATGACTGTTCccctttttgaaaactttcccatttccacaagaaata
tttttagccctcccccccccctttctgtGATTTTTAGAACATCTCTACCC
CCTTCCCTTTAATAAAAGAgggggggggtgcaaactatgattTATGGGAA
TTTGGTTGGTCTTTTTTAATCTCTACGTGAAtctaaaatttttcgctgat
tttGTAAATTCATATGTTGgtttttatccttttttatccagctgaagaaa
ttcaaaacattttgtaTAACATACAGCAGGGTTTATCCACATGTCAGGAA
TACCATCACTGCGTATTATGGAATGATGGCCTTTTAAACaccagaaaata
ttaaaatccaAGGAATGTTTCATTTCTAAATGTGATATGATGAGACATTT
TATTTGATAGAAAGTAGGAGATTAATAAGGAAGAAACTCCTGAATCTAGC
CtctaaaatttgtaaatttttctctaattctaTTTTGAACCATAGCTATT
CGAAGAAGACATCAAATGGGCAAGAGAACTTCTCAAACAGAaagaagaaa
tgaagaaaactgAAGAATCAAAAGAAACTGAACGTAGTAAtggtgaagaa
gaaaaatgcgCTAAATGTCACCGATGTTTCAAAGTCAATGAGAAAGCCTT
GTCCATGAATGGTAACGAAGAAAAGAGAACAGAAGATGAGATACCAAAAA
CATGAGTAAGTTTTAATTCCATTTTTATTTACTGTTTGTATTTCGAGGGA
TTGAGTTTAGTCGGTGTTGATATTCTTCATATATAACTCTGGTATCAACA
ATGCCAAAGAATGTCAAGATTTTAGCCCATAACGTTAGTTTTGAAATTAG
TTTTCCCTCTTTCAACATACTTTATAACATGAATATTAGGAGACGTGTAA
CCAACAGGAATGGATAATTCTCGTGTTAATAAAATCCCCGTTAATTTTTG
AAGGTTTACTCATAAACCTGCTCATTTGTGTCAATTTGTGATgttgtgtt
aatttcaaggccgttaaatgcttccatacttatattcatgtaataaggtt
TATTCGATTCATGATCAATCGAATTTTTTCGACAGTTGAATTCAACCAAA
TTTGAGCGACGAtttgtcgaaccaatcaaatttgacCAATGATTAATCGA
ACTCGATCGATCGAGTTTGATTGTTGAttgatcgaacgcaatcgaactcA
GTTACATATCAATGTAACTCGATGTGTGGTCATAGATTTGTAAAAGCCCG
AAGTACTAGATGTGCtcttgctgaaaagtgtgccgaggttaggtaggaaa
tcctagaatttcagcgtttgaccaatcagaagtttcacgggttttcgaaa
acaatagcaataatattttttccgatattcaatttttttgcctgcaattg
cttaaagcacgccatctagcccttcgggctttataaatctatttgTACGA
TTCACTTTGATTGCCATCCCGTGAAATTAGTATTTAGTTTATCAATTTTC
CAAAGAGATGCacaattttctttataagaacaattttataagaacacgag
gctgaaaattggccgGAACCCAAGAACAAATTAAGTACAATCCTCAGCCT
AAGATTTCAGAAATCACTTATAGAAAGTtctgattttaacagattttaag
tttttatgtaaagaaactaagcgttttaagaacatcgtaaggaCATTTAA
GcctggaaattttaaaagaattaagCCCACCCTGAGCCTAAAACtactgt
ttcttataaaaaaaagtgtatttagTTGGTTGACGATCCAGTCGAAAACG
GCTTCATAAAATGTCTCCTTAAATTTTCTGGTTATACGAgctcaaaaaat
gtcatatgagCATTAGAATTCTGGatttaaacattaaaaattcTCTTAAC
TTAGAATATCTTTCATTACTAATGTAAATTTTATGATGTGACACGTATAA
ATTTTGTGATGACAAGTTCATCGAGATAATGAACAGATGTGCAAAGTTTT
CATTTTGAGAAAGGGCTGATCAATCTTAATGACTCCATATTTGGTCATCT
CCTTATAAGGACTTTGTGTGATATATCATTTCTGCTAATATTTGACGGAC
CAACGCACACaaatcttttcaactttttctttaaGCTTTTGAGCTTTTTT
AGCTTGAGTTGTAACTTTTACATCAATTATAACACCAAATTAATATTTCC
ATAGCTCAGCAATGTCTTAAGCAgccattttttaaaacatagcCATGGCC
CTTACCAAGCCAAAAATTCACAAACAACTATGGTTAAAAAACCTATTTCA
CTCACAATTTCCAAAATGTTCCTTTCTATACGTTAACTGTAACTAATGGG
AAAACGTTGTTTTGTGATaatattttaataataattGGTCATCCGTATGA
ATTTTGattcaaattgattttgatattttcgatGTTGTCATTCTGAAGTG
TTTACTAGGGACCAAGGAATGATCAGTCTATCAACCCCTAAACATCAAAA
TTGGTTTAATACATTGGGCTATTCTAGAAATGGTCTGtaccctatgttga
ggaggagtgacgtccagggtggtctaaGAAGGGTCTGGTTTTCGAGTATA
GAAATCCAgcgtggtcagtaaaatgagggtgaaaatccagggtggtcagt
aaaatgagagtgaaaatccagggtggtcagtaaaacgaggtcgTAAATCC
AGACCTCAAATTCTTTCGGAATGAGCCCATTAGGTTTGCGTCTtaagtgt
tttctttttaattttaccttTTAAGACGTCACGTTTTAAGATCTCTAGAG
AAGGAATAAGCTTAAGCAAAAGTCCATTGAAACGAAACTTTCCGTCTCAA
TAAGCCTTCTATGGCTCATGGTACTAAACCCTTTTGTACAAGCCATTGTT
TGGCTCGCCTAAGAGCTTACTTAGCCATTCAATAACAGTTGCTTAGCCAT
TTAATGATTAGCAGTTTTCGATATTTAAACTGAGCCATCGCCCTTCCATA
TCTTCAGTTGCATATCAGCGCTCACACCAGAATTACTTTTTGAGAGAATT
CCTTCGTTATTTTTTCTTCTACTTCACAAGATGAGCGAAATCACTGATGA
TCAACTCGAAGAATTGAGAGTAAGTGTGACCATTATTTGTCTTTCTTCGT
GAGATGACTTGTAAGGCAGTAAACGTGGCCTCACATCCCGAGGGAATACC
CACATCGATCAGGTTGTCTTGAGACTGTTTATTTTCTGGAATTGGGAAAA
ACCTTTGTTGAATTCTTTTTGCAATCCTTTGAGCATCCTGACAGACTGAA
GACCGCCAGGCCTACTTAAGAAATCTAATCAAAGGTGTTTCTTTTgtgaa
taaataaaaacattttagttTCGAGTATATCCCTACGTTTCTATTGTTTT
AGGACGCTTTCACACTTTTCGACAAAAAAGGCGACGATAAAGTCGAGTTT
AGTCAAATCATCGACGTCTTGCGATCACTCAAACTCAACCCACTCACGAC
AGATGTCGAAAAAGTCATCAAAGATTCCGGCTTAGAAGGCACCCGTGTCG
ACTTCGCTACTTTCGCTAGCATTTACGAGCAATTCAAGAAACGGCCATCA
ATCGCTAACCGTGATGATTTAATCGAAATGTTCAAAACGTTCGATCGTGA
CAGTTCAAAGACCGTCTTTGGAGGTGAATTCAGACAAATTTTACTCAATA
TGGGTGATAAAATGAGTGAGCCAGAAATCGATACTATGGTTTCACCCAGT
GAAAATGCAGAAGGCTACATCCCTTACGAAACTCTCTTGGATTTCGTTAT
GTCAAAATAAATTAATATCGACTTAACTAGATTAGAAATAACATCTGAAT
TCTCATTCAAAAAGGGACAATTTCATAAACTTTCAAAGAACAAAAGGACT
ACTCTTCTGgagttgaaattttttgtttaaagctattttattttcatcaa
atttatgcaaaaatattgTAATTTTATTATACCAATATTATATTTTGTTG
TAAGATAGGCCACTGATAAATTTGTGGAAAAGAAAACTAGAGCTGAGTTT
CAACAGAGGCTAACAtctgttaaaatt

Coding sequence (CDS) from alignment at sc0000119:191781..199157+

>TCONS_00010957 ID=TCONS_00010957|Name=TCONS_00010957|organism=Clytia hemisphaerica|type=CDS|length=3465bp|location=Sequence derived from alignment at sc0000119:191781..199157+ (Clytia hemisphaerica)
ATGATGGCAAGCTTGACCTGGAAGAAATCAAGGAAAAATGTCTCTTCTTC
TGCTGCCAAACTCtttcaaaatgaagatgaagaagaaaatgaagaagaaa
ttatAGAAGATTGGAGAGATATTGTTCCATCAAAAAAGAGTAAAGTAATG
TTGGAAGATGGTGTCCAGAAAAGTAAACGTCTAGTCAATGATGCAACCCA
ACTTGCAGACGAAGAGAGGTATTGGGAAGCATTGCAAAAATTTGATGAGG
CTTTATCATTCACACCTCTTAATGAAAAGATACACGAAATGAAAGCACAG
aTTCTTCTAGAACTTGGAGAAATTTTCCCAGCAGTACAAGCTGCTGAGCA
AGTTGTCAAATTGAATCCAACATGGGCTGAAGGTTTCCAAACATTGGGTA
GAACACAGATTAGCATTGGAGAAATTGATATGGCGCTGAAAAATTTTTGT
CGAGCTTATCATCTGAATCCTACACTTGACGATCTATTCGAAGAAGACAT
CAAATGGGCAAGAGAACTTCTCAAACAGAaagaagaaatgaagaaaactg
AAGAATCAAAAGAAACTGAACGTAGTAAtggtgaagaagaaaaatgcgCT
AAATGTCACCGATGTTTCAAAGTCAATGAGAAAGCCTTGTCCATGAATGG
TAACGAAGAAAAGAGAACAGAAGATGAGATACCAAAAACATGAATGATGG
CAAGCTTGACCTGGAAGAAATCAAGGAAAAATGTCTCTTCTTCTGCTGCC
AAACTCtttcaaaatgaagatgaagaagaaaatgaagaagaaattatAGA
AGATTGGAGAGATATTGTTCCATCAAAAAAGAGTAAAGTAATGTTGGAAG
ATGGTGTCCAGAAAAGTAAACGTCTAGTCAATGATGCAACCCAACTTGCA
GACGAAGAGAGGTATTGGGAAGCATTGCAAAAATTTGATGAGGCTTTATC
ATTCACACCTCTTAATGAAAAGATACACGAAATGAAAGCACAGaTTCTTC
TAGAACTTGGAGAAATTTTCCCAGCAGTACAAGCTGCTGAGCAAGTTGTC
AAATTGAATCCAACATGGGCTGAAGGTTTCCAAACATTGGGTAGAACACA
GATTAGCATTGGAGAAATTGATATGGCGCTGAAAAATTTTTGTCGAGCTT
ATCATCTGAATCCTACACTTGACGATCTATTCGAAGAAGACATCAAATGG
GCAAGAGAACTTCTCAAACAGAaagaagaaatgaagaaaactgAAGAATC
AAAAGAAACTGAACGTAGTAAtggtgaagaagaaaaatgcgCTAAATGTC
ACCGATGTTTCAAAGTCAATGAGAAAGCCTTGTCCATGAATGGTAACGAA
GAAAAGAGAACAGAAGATGAGATACCAAAAACATGAATGATGGCAAGCTT
GACCTGGAAGAAATCAAGGAAAAATGTCTCTTCTTCTGCTGCCAAACTCt
ttcaaaatgaagatgaagaagaaaatgaagaagaaattatAGAAGATTGG
AGAGATATTGTTCCATCAAAAAAGAGTAAAGTAATGTTGGAAGATGGTGT
CCAGAAAAGTAAACGTCTAGTCAATGATGCAACCCAACTTGCAGACGAAG
AGAGGTATTGGGAAGCATTGCAAAAATTTGATGAGGCTTTATCATTCACA
CCTCTTAATGAAAAGATACACGAAATGAAAGCACAGaTTCTTCTAGAACT
TGGAGAAATTTTCCCAGCAGTACAAGCTGCTGAGCAAGTTGTCAAATTGA
ATCCAACATGGGCTGAAGGTTTCCAAACATTGGGTAGAACACAGATTAGC
ATTGGAGAAATTGATATGGCGCTGAAAAATTTTTGTCGAGCTTATCATCT
GAATCCTACACTTGACGATCTATTCGAAGAAGACATCAAATGGGCAAGAG
AACTTCTCAAACAGAaagaagaaatgaagaaaactgAAGAATCAAAAGAA
ACTGAACGTAGTAAtggtgaagaagaaaaatgcgCTAAATGTCACCGATG
TTTCAAAGTCAATGAGAAAGCCTTGTCCATGAATGGTAACGAAGAAAAGA
GAACAGAAGATGAGATACCAAAAACATGAATGATGGCAAGCTTGACCTGG
AAGAAATCAAGGAAAAATGTCTCTTCTTCTGCTGCCAAACTCtttcaaaa
tgaagatgaagaagaaaatgaagaagaaattatAGAAGATTGGAGAGATA
TTGTTCCATCAAAAAAGAGTAAAGTAATGTTGGAAGATGGTGTCCAGAAA
AGTAAACGTCTAGTCAATGATGCAACCCAACTTGCAGACGAAGAGAGGTA
TTGGGAAGCATTGCAAAAATTTGATGAGGCTTTATCATTCACACCTCTTA
ATGAAAAGATACACGAAATGAAAGCACAGaTTCTTCTAGAACTTGGAGAA
ATTTTCCCAGCAGTACAAGCTGCTGAGCAAGTTGTCAAATTGAATCCAAC
ATGGGCTGAAGGTTTCCAAACATTGGGTAGAACACAGATTAGCATTGGAG
AAATTGATATGGCGCTGAAAAATTTTTGTCGAGCTTATCATCTGAATCCT
ACACTTGACGATCTATTCGAAGAAGACATCAAATGGGCAAGAGAACTTCT
CAAACAGAaagaagaaatgaagaaaactgAAGAATCAAAAGAAACTGAAC
GTAGTAAtggtgaagaagaaaaatgcgCTAAATGTCACCGATGTTTCAAA
GTCAATGAGAAAGCCTTGTCCATGAATGGTAACGAAGAAAAGAGAACAGA
AGATGAGATACCAAAAACATGAATGATGGCAAGCTTGACCTGGAAGAAAT
CAAGGAAAAATGTCTCTTCTTCTGCTGCCAAACTCtttcaaaatgaagat
gaagaagaaaatgaagaagaaattatAGAAGATTGGAGAGATATTGTTCC
ATCAAAAAAGAGTAAAGTAATGTTGGAAGATGGTGTCCAGAAAAGTAAAC
GTCTAGTCAATGATGCAACCCAACTTGCAGACGAAGAGAGGTATTGGGAA
GCATTGCAAAAATTTGATGAGGCTTTATCATTCACACCTCTTAATGAAAA
GATACACGAAATGAAAGCACAGaTTCTTCTAGAACTTGGAGAAATTTTCC
CAGCAGTACAAGCTGCTGAGCAAGTTGTCAAATTGAATCCAACATGGGCT
GAAGGTTTCCAAACATTGGGTAGAACACAGATTAGCATTGGAGAAATTGA
TATGGCGCTGAAAAATTTTTGTCGAGCTTATCATCTGAATCCTACACTTG
ACGATCTATTCGAAGAAGACATCAAATGGGCAAGAGAACTTCTCAAACAG
AaagaagaaatgaagaaaactgAAGAATCAAAAGAAACTGAACGTAGTAA
tggtgaagaagaaaaatgcgCTAAATGTCACCGATGTTTCAAAGTCAATG
AGAAAGCCTTGTCCATGAATGGTAACGAAGAAAAGAGAACAGAAGATGAG
ATACCAAAAACATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006159XLOC_006159Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00010957-proteinTCONS_00010957-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00010957-exon-sc0000119-1491911889:191781..192066TCONS_00010957-exon-sc0000119-1491911889:191781..192066Clytia hemisphaericaexon
TCONS_00010957-exon-sc0000119-1510915933:191781..192066TCONS_00010957-exon-sc0000119-1510915933:191781..192066Clytia hemisphaericaexon
TCONS_00010957-exon-sc0000119-1575043694:191781..192066TCONS_00010957-exon-sc0000119-1575043694:191781..192066Clytia hemisphaericaexon
TCONS_00010957-exon-sc0000119-1491911889:192321..192402TCONS_00010957-exon-sc0000119-1491911889:192321..192402Clytia hemisphaericaexon
TCONS_00010957-exon-sc0000119-1510915933:192321..192402TCONS_00010957-exon-sc0000119-1510915933:192321..192402Clytia hemisphaericaexon
TCONS_00010957-exon-sc0000119-1575043694:192321..192402TCONS_00010957-exon-sc0000119-1575043694:192321..192402Clytia hemisphaericaexon
TCONS_00010957-exon-sc0000119-1491911889:194250..194381TCONS_00010957-exon-sc0000119-1491911889:194250..194381Clytia hemisphaericaexon
TCONS_00010957-exon-sc0000119-1510915933:194250..194381TCONS_00010957-exon-sc0000119-1510915933:194250..194381Clytia hemisphaericaexon
TCONS_00010957-exon-sc0000119-1575043694:194250..194381TCONS_00010957-exon-sc0000119-1575043694:194250..194381Clytia hemisphaericaexon
TCONS_00010957-exon-sc0000119-1491911889:194590..194640TCONS_00010957-exon-sc0000119-1491911889:194590..194640Clytia hemisphaericaexon
TCONS_00010957-exon-sc0000119-1510915933:194590..194640TCONS_00010957-exon-sc0000119-1510915933:194590..194640Clytia hemisphaericaexon
TCONS_00010957-exon-sc0000119-1575043694:194590..194640TCONS_00010957-exon-sc0000119-1575043694:194590..194640Clytia hemisphaericaexon
TCONS_00010957-exon-sc0000119-1491911889:195576..195785TCONS_00010957-exon-sc0000119-1491911889:195576..195785Clytia hemisphaericaexon
TCONS_00010957-exon-sc0000119-1510915933:195576..195785TCONS_00010957-exon-sc0000119-1510915933:195576..195785Clytia hemisphaericaexon
TCONS_00010957-exon-sc0000119-1575043694:195576..195785TCONS_00010957-exon-sc0000119-1575043694:195576..195785Clytia hemisphaericaexon
TCONS_00010957-exon-sc0000119-1491911889:198161..198199TCONS_00010957-exon-sc0000119-1491911889:198161..198199Clytia hemisphaericaexon
TCONS_00010957-exon-sc0000119-1510915933:198161..198199TCONS_00010957-exon-sc0000119-1510915933:198161..198199Clytia hemisphaericaexon
TCONS_00010957-exon-sc0000119-1575043694:198161..198199TCONS_00010957-exon-sc0000119-1575043694:198161..198199Clytia hemisphaericaexon
TCONS_00010957-exon-sc0000119-1491911889:198483..199157TCONS_00010957-exon-sc0000119-1491911889:198483..199157Clytia hemisphaericaexon
TCONS_00010957-exon-sc0000119-1510915933:198483..199157TCONS_00010957-exon-sc0000119-1510915933:198483..199157Clytia hemisphaericaexon
TCONS_00010957-exon-sc0000119-1575043694:198483..199157TCONS_00010957-exon-sc0000119-1575043694:198483..199157Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000119supercontigsc0000119:191781..199157 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
29.1063	29.205	9.3541	5.05993	2.11919	3.37454	5.90869	5.61093	3.55047	3.23642	2.52399	3.35641	1.82551	3.13555	1.76656	1.02427	1484.12	1788.21	1.04264	0.73969	939.075	910.053	14.4505	14.5758	3.47348	2.89214	1.24735	0	3.02904	2.98292
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom
IPR013026TPR-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Blast
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BLAST of TCONS_00010957 vs. Swiss-Prot (Human)
Match: TTC33 (Tetratricopeptide repeat protein 33 OS=Homo sapiens GN=TTC33 PE=1 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 1.745e-30
Identity = 56/126 (44.44%), Postives = 90/126 (71.43%), Query Frame = 3 
Query:  201 KKSKVMLEDGVQKSKRLVNDATQLADEERYWEALQKFDEALSFTPLNEKIHEMKAQILLELGEIFPAVQAAEQVVKLNPTWAEGFQTLGRTQISIGEIDMALKNFCRAYHLNPTLDDLFEEDIKWA 578
            ++ +++LE   +KSK+L ++   LA+ +RY EA+QK+DEAL  TP +  ++EMK+Q+L+ L E+FPAV AAE  V+ NP   E +QTLGR Q+ +GEI +A+++F  A H+ P   ++++ED+ WA
Sbjct:   46 RRKEILLEGCAEKSKQLKDEGASLAENKRYREAIQKWDEALQLTPNDATLYEMKSQVLMSLHEMFPAVHAAEMAVQQNPHSWESWQTLGRAQLGLGEIILAIRSFQVALHIYPMNPEIWKEDLSWA 171
The following BLAST results are available for this feature:
BLAST of TCONS_00010957 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TTC331.745e-3044.44Tetratricopeptide repeat protein 33 OS=Homo sapien... [more]
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