TCONS_00010957-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00010957-protein
Unique NameTCONS_00010957-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length230

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00010957-protein ID=TCONS_00010957-protein|Name=TCONS_00010957-protein|organism=Clytia hemisphaerica|type=polypeptide|length=230bp
MMASLTWKKSRKNVSSSAAKLFQNEDEEENEEEIIEDWRDIVPSKKSKVM
LEDGVQKSKRLVNDATQLADEERYWEALQKFDEALSFTPLNEKIHEMKAQ
ILLELGEIFPAVQAAEQVVKLNPTWAEGFQTLGRTQISIGEIDMALKNFC
RAYHLNPTLDDLFEEDIKWARELLKQKEEMKKTEESKETERSNGEEEKCA
KCHRCFKVNEKALSMNGNEEKRTEDEIPKT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_006159XLOC_006159Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00010957TCONS_00010957Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom
IPR013026TPR-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 170..197
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 178..197
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..29
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 92..125
e-value: 46.0
score: 9.2
coord: 126..159
e-value: 1.8
score: 17.5
coord: 58..91
e-value: 65.0
score: 7.8
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 126..159
score: 9.765
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 92..125
score: 5.959
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 58..91
score: 7.08
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 111..198
e-value: 1.3E-11
score: 43.9
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 19..110
e-value: 1.4E-7
score: 30.3
IPR011990Tetratricopeptide-like helical domainSUPERFAMILY48452TPR-likecoord: 60..178
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 58..159
score: 18.996

Blast
[Close]
BLAST of TCONS_00010957-protein vs. Swiss-Prot (Human)
Match: TTC33 (Tetratricopeptide repeat protein 33 OS=Homo sapiens GN=TTC33 PE=1 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 4.099e-38
Identity = 77/196 (39.29%), Postives = 126/196 (64.29%), Query Frame = 0 
Query:    2 MASLTWK-KSRKNVSSSAAKLFQNEDEEENEEEIIED----WRDIVPSKKSKVMLEDGVQKSKRLVNDATQLADEERYWEALQKFDEALSFTPLNEKIHEMKAQILLELGEIFPAVQAAEQVVKLNPTWAEGFQTLGRTQISIGEIDMALKNFCRAYHLNPTLDDLFEEDIKWARELLKQK---EEMKKTEESKET 189
            MAS  WK K  + VS   ++ F  E E  +E++++++    W   +  +K +++LE   +KSK+L ++   LA+ +RY EA+QK+DEAL  TP +  ++EMK+Q+L+ L E+FPAV AAE  V+ NP   E +QTLGR Q+ +GEI +A+++F  A H+ P   ++++ED+ WAR L +Q+   + +KK+E   E 
Sbjct:    1 MASFGWKRKIGEKVSKVTSQQF--EAEAADEKDVVDNDEGNWLHAIKRRK-EILLEGCAEKSKQLKDEGASLAENKRYREAIQKWDEALQLTPNDATLYEMKSQVLMSLHEMFPAVHAAEMAVQQNPHSWESWQTLGRAQLGLGEIILAIRSFQVALHIYPMNPEIWKEDLSWARTLQEQQKVAQRIKKSEAPAEV 193
The following BLAST results are available for this feature:
BLAST of TCONS_00010957-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TTC334.099e-3839.29Tetratricopeptide repeat protein 33 OS=Homo sapien... [more]
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